RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 TMEM258P61165 79 aa10.37□□□□□ -0.75
CCDC43-202ENST00000457422 IGFL1Q6UW32 110 aa10.37□□□□□ -0.75
CCDC43-202ENST00000457422 A0A087WTM6 91 aa10.35□□□□□ -0.75
CCDC43-202ENST00000457422 A0A0G2JQZ4 141 aa10.35□□□□□ -0.75
CCDC43-202ENST00000457422 C20orf197Q8N268 126 aa10.35□□□□□ -0.75
CCDC43-202ENST00000457422 SPACA4Q8TDM5 124 aa10.35□□□□□ -0.75
CCDC43-202ENST00000457422 DNAH2Q9P225 4427 aa10.34□□□□□ -0.75
CCDC43-202ENST00000457422 DNAH17Q9UFH2 4485 aa10.34□□□□□ -0.75
CCDC43-202ENST00000457422 UBE2AP49459 152 aa10.34□□□□□ -0.75
CCDC43-202ENST00000457422 Q6ZR54 194 aa10.34□□□□□ -0.75
CCDC43-202ENST00000457422 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.34□□□□□ -0.75
CCDC43-202ENST00000457422 HECTD4Q9Y4D8 3996 aa10.33□□□□□ -0.76
CCDC43-202ENST00000457422 KRTAP13-1Q8IUC0 172 aa10.32□□□□□ -0.76
CCDC43-202ENST00000457422 DPH3Q96FX2 82 aa10.32□□□□□ -0.76
CCDC43-202ENST00000457422 KLKP1Q107X0 134 aa10.31□□□□□ -0.76
CCDC43-202ENST00000457422 KMT2AQ03164 3969 aa10.3□□□□□ -0.76
CCDC43-202ENST00000457422 DSCR10P59022 87 aa10.29□□□□□ -0.76
CCDC43-202ENST00000457422 RTL8CO15255 209 aa10.27□□□□□ -0.76
CCDC43-202ENST00000457422 SRRM2Q9UQ35 2752 aaKnown RBP10.27□□□□□ -0.77
CCDC43-202ENST00000457422 OCR1Q9BZK8 76 aa10.27□□□□□ -0.77
CCDC43-202ENST00000457422 RPS28P62857 69 aaKnown RBP10.24□□□□□ -0.77
CCDC43-202ENST00000457422 A0A087WSZ3 146 aa10.24□□□□□ -0.77
CCDC43-202ENST00000457422 H7BZZ5 65 aa10.24□□□□□ -0.77
CCDC43-202ENST00000457422 K7EQZ3 153 aa10.23□□□□□ -0.77
CCDC43-202ENST00000457422 J3KT08 172 aa10.22□□□□□ -0.77
CCDC43-202ENST00000457422 SNURFQ9Y675 71 aa10.21□□□□□ -0.77
CCDC43-202ENST00000457422 DNAH6Q9C0G6 4158 aa10.21□□□□□ -0.78
CCDC43-202ENST00000457422 C1orf134Q5TEV5 83 aa10.2□□□□□ -0.78
CCDC43-202ENST00000457422 PLAC8Q9NZF1 115 aa10.2□□□□□ -0.78
CCDC43-202ENST00000457422 TMEM254Q8TBM7 123 aa10.19□□□□□ -0.78
CCDC43-202ENST00000457422 DNAH8Q96JB1 4490 aa10.19□□□□□ -0.78
CCDC43-202ENST00000457422 NDUFC1O43677 76 aa10.19□□□□□ -0.78
CCDC43-202ENST00000457422 DEFB116Q30KQ4 102 aa10.18□□□□□ -0.78
CCDC43-202ENST00000457422 IGLV5-52A0A0A0MRZ9 124 aa10.18□□□□□ -0.78
CCDC43-202ENST00000457422 FBN3Q75N90 2809 aa10.17□□□□□ -0.78
CCDC43-202ENST00000457422 LY6G6CO95867 125 aa10.17□□□□□ -0.78
CCDC43-202ENST00000457422 FAM236DA0A1B0GTK5 79 aa10.16□□□□□ -0.78
CCDC43-202ENST00000457422 FAM236CP0DP71 79 aa10.16□□□□□ -0.78
CCDC43-202ENST00000457422 LINC00483Q53H64 154 aa10.16□□□□□ -0.78
CCDC43-202ENST00000457422 SVIPQ8NHG7 77 aa10.16□□□□□ -0.78
CCDC43-202ENST00000457422 HCG22E2RYF7 251 aa10.15□□□□□ -0.78
CCDC43-202ENST00000457422 PSORS1C2Q9UIG4 136 aa10.15□□□□□ -0.78
CCDC43-202ENST00000457422 A0A0U1RQV1 116 aa10.14□□□□□ -0.79
CCDC43-202ENST00000457422 TGP01266 2768 aa10.14□□□□□ -0.79
CCDC43-202ENST00000457422 LCE6AA0A183 80 aa10.13□□□□□ -0.79
CCDC43-202ENST00000457422 FAM30AQ9NZY2 134 aa10.13□□□□□ -0.79
CCDC43-202ENST00000457422 ZNF706Q9Y5V0 76 aaPredicted RBP10.13□□□□□ -0.79
CCDC43-202ENST00000457422 RPL37AP61513 92 aaKnown RBP10.13□□□□□ -0.79
CCDC43-202ENST00000457422 LINC00472Q9H8W2 130 aa10.13□□□□□ -0.79
CCDC43-202ENST00000457422 ALMS1Q8TCU4 4167 aa10.11□□□□□ -0.79
CCDC43-202ENST00000457422 IGLV9-49A0A0B4J1Y8 123 aa10.1□□□□□ -0.79
CCDC43-202ENST00000457422 ZNF861PO60384 105 aa10.1□□□□□ -0.79
CCDC43-202ENST00000457422 FRAS1Q86XX4 4008 aa10.09□□□□□ -0.79
CCDC43-202ENST00000457422 DNAH11Q96DT5 4516 aa10.09□□□□□ -0.79
CCDC43-202ENST00000457422 DNAH5Q8TE73 4624 aa10.09□□□□□ -0.79
CCDC43-202ENST00000457422 OXTP01178 125 aa10.08□□□□□ -0.8
CCDC43-202ENST00000457422 ATP5EP56381 51 aaPredicted RBP10.07□□□□□ -0.8
CCDC43-202ENST00000457422 PRR15Q8IV56 129 aa10.07□□□□□ -0.8
CCDC43-202ENST00000457422 WWC2-AS2Q96NR7 200 aa10.07□□□□□ -0.8
CCDC43-202ENST00000457422 A8MWP4 228 aa10.06□□□□□ -0.8
CCDC43-202ENST00000457422 KRTAP29-1A8MX34 341 aaPredicted RBP10.05□□□□□ -0.8
CCDC43-202ENST00000457422 WFDC13Q8IUB5 93 aa10.05□□□□□ -0.8
CCDC43-202ENST00000457422 SERP1Q9Y6X1 66 aa10.04□□□□□ -0.8
CCDC43-202ENST00000457422 C5orf47Q569G3 176 aa10.03□□□□□ -0.8
CCDC43-202ENST00000457422 KRTAP10-2P60368 255 aa10.02□□□□□ -0.81
CCDC43-202ENST00000457422 ANAPC11Q9NYG5 84 aa10.02□□□□□ -0.81
CCDC43-202ENST00000457422 ZCCHC13Q8WW36 166 aaKnown RBP10.01□□□□□ -0.81
CCDC43-202ENST00000457422 MOBPQ13875 183 aa10□□□□□ -0.81
CCDC43-202ENST00000457422 Q96NJ1 140 aa10□□□□□ -0.81
CCDC43-202ENST00000457422 IGLV7-43P04211 117 aa10□□□□□ -0.81
CCDC43-202ENST00000457422 HRCT1Q6UXD1 115 aa10□□□□□ -0.81
CCDC43-202ENST00000457422 CASC2Q6XLA1 102 aa9.99□□□□□ -0.81
CCDC43-202ENST00000457422 NDUFB1O75438 58 aa9.95□□□□□ -0.82
CCDC43-202ENST00000457422 FAT2Q9NYQ8 4349 aa9.95□□□□□ -0.82
CCDC43-202ENST00000457422 MMP24-AS1A0A0U1RRL7 71 aa9.95□□□□□ -0.82
CCDC43-202ENST00000457422 CIRBP-AS1Q8TBR5 109 aa9.95□□□□□ -0.82
CCDC43-202ENST00000457422 HYDINQ4G0P3 5121 aa9.95□□□□□ -0.82
CCDC43-202ENST00000457422 PKD1P98161 4303 aa9.94□□□□□ -0.82
CCDC43-202ENST00000457422 Q6ZSA8 131 aa9.92□□□□□ -0.82
CCDC43-202ENST00000457422 MP68P56378 58 aa9.91□□□□□ -0.82
CCDC43-202ENST00000457422 ASB16-AS1Q495Z4 193 aa9.9□□□□□ -0.82
CCDC43-202ENST00000457422 KRTAP10-1P60331 282 aa9.89□□□□□ -0.83
CCDC43-202ENST00000457422 hDV103S1A0JD37 113 aa9.88□□□□□ -0.83
CCDC43-202ENST00000457422 H3BPC8 53 aa9.88□□□□□ -0.83
CCDC43-202ENST00000457422 Q5XG85 94 aa9.88□□□□□ -0.83
CCDC43-202ENST00000457422 LRP1BQ9NZR2 4599 aa9.86□□□□□ -0.83
CCDC43-202ENST00000457422 A0A1B0GVX0 72 aa9.85□□□□□ -0.83
CCDC43-202ENST00000457422 H0Y9P7 68 aa9.85□□□□□ -0.83
CCDC43-202ENST00000457422 CD164Q04900 197 aa9.85□□□□□ -0.83
CCDC43-202ENST00000457422 C8orf17Q9NRJ1 99 aa9.85□□□□□ -0.83
CCDC43-202ENST00000457422 SMIM26A0A096LP01 95 aa9.84□□□□□ -0.83
CCDC43-202ENST00000457422 SSBP3-AS1Q7Z2R9 100 aa9.84□□□□□ -0.83
CCDC43-202ENST00000457422 TRAV22A0A0B4J277 110 aa9.84□□□□□ -0.83
CCDC43-202ENST00000457422 LINC00208Q96KT6 92 aa9.83□□□□□ -0.84
CCDC43-202ENST00000457422 CDK2AP2O75956 126 aa9.81□□□□□ -0.84
CCDC43-202ENST00000457422 IGHV6-1A0A0B4J1U7 121 aa9.81□□□□□ -0.84
CCDC43-202ENST00000457422 TP53AIP1Q9HCN2 124 aa9.8□□□□□ -0.84
CCDC43-202ENST00000457422 CYP4F30PQ9H0H9 118 aa9.79□□□□□ -0.84
CCDC43-202ENST00000457422 SACSQ9NZJ4 4579 aa9.79□□□□□ -0.84
CCDC43-202ENST00000457422 FP248Q71RG6 208 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms