RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 A0A0U1RQV1 116 aa7.88□□□□□ -1.15
LINC00959-201ENST00000456581 PSCAO43653 123 aa7.88□□□□□ -1.15
LINC00959-201ENST00000456581 TLX1NBP0CAT3 122 aa7.88□□□□□ -1.15
LINC00959-201ENST00000456581 UBE2BP63146 152 aa7.88□□□□□ -1.15
LINC00959-201ENST00000456581 NDUFC1O43677 76 aa7.88□□□□□ -1.15
LINC00959-201ENST00000456581 BRK1Q8WUW1 75 aa7.88□□□□□ -1.15
LINC00959-201ENST00000456581 K7EQZ3 153 aa7.87□□□□□ -1.15
LINC00959-201ENST00000456581 IGKV2-24A0A0C4DH68 120 aa7.86□□□□□ -1.15
LINC00959-201ENST00000456581 PRYO14603 147 aa7.86□□□□□ -1.15
LINC00959-201ENST00000456581 FUSP35637 526 aaKnown RBP eCLIP7.86□□□□□ -1.15
LINC00959-201ENST00000456581 ATP5EP56381 51 aaPredicted RBP7.85□□□□□ -1.15
LINC00959-201ENST00000456581 PRLHP81277 87 aa7.85□□□□□ -1.15
LINC00959-201ENST00000456581 TNP2Q05952 138 aa7.85□□□□□ -1.15
LINC00959-201ENST00000456581 DSCR10P59022 87 aa7.84□□□□□ -1.15
LINC00959-201ENST00000456581 MRPL55Q7Z7F7 128 aaKnown RBP7.84□□□□□ -1.15
LINC00959-201ENST00000456581 VPS13DQ5THJ4 4388 aa7.84□□□□□ -1.15
LINC00959-201ENST00000456581 DHRS4-AS1Q9P1J3 65 aa7.84□□□□□ -1.16
LINC00959-201ENST00000456581 A0A096LNI7 61 aa7.83□□□□□ -1.16
LINC00959-201ENST00000456581 Q8NBF4 154 aa7.83□□□□□ -1.16
LINC00959-201ENST00000456581 PLA2G2DQ9UNK4 145 aa7.83□□□□□ -1.16
LINC00959-201ENST00000456581 SPRR1AP35321 89 aa7.82□□□□□ -1.16
LINC00959-201ENST00000456581 CHTF8P0CG12 524 aa7.82□□□□□ -1.16
LINC00959-201ENST00000456581 LINC00476Q8WZB0 136 aa7.81□□□□□ -1.16
LINC00959-201ENST00000456581 RPL37AP61513 92 aaKnown RBP7.8□□□□□ -1.16
LINC00959-201ENST00000456581 IGLV5-37A0A075B6J1 123 aa7.79□□□□□ -1.16
LINC00959-201ENST00000456581 DNAH2Q9P225 4427 aa7.79□□□□□ -1.16
LINC00959-201ENST00000456581 NBDYA0A0U1RRE5 68 aa7.79□□□□□ -1.16
LINC00959-201ENST00000456581 NUPR2A6NF83 97 aa7.79□□□□□ -1.16
LINC00959-201ENST00000456581 REG3GQ6UW15 175 aa7.79□□□□□ -1.16
LINC00959-201ENST00000456581 KRTAP11-1Q8IUC1 163 aa7.79□□□□□ -1.16
LINC00959-201ENST00000456581 WFDC13Q8IUB5 93 aa7.78□□□□□ -1.16
LINC00959-201ENST00000456581 IGFL1Q6UW32 110 aa7.77□□□□□ -1.17
LINC00959-201ENST00000456581 SPRR4Q96PI1 79 aa7.76□□□□□ -1.17
LINC00959-201ENST00000456581 A0A087WSZ3 146 aa7.76□□□□□ -1.17
LINC00959-201ENST00000456581 C16orf90A8MZG2 172 aa7.75□□□□□ -1.17
LINC00959-201ENST00000456581 CNBPP62633 177 aaKnown RBP7.75□□□□□ -1.17
LINC00959-201ENST00000456581 HECTD4Q9Y4D8 3996 aa7.75□□□□□ -1.17
LINC00959-201ENST00000456581 PANO1I0J062 215 aa7.75□□□□□ -1.17
LINC00959-201ENST00000456581 Q6ZRN7 208 aaPredicted RBP7.75□□□□□ -1.17
LINC00959-201ENST00000456581 C1orf64Q8NEQ6 169 aa7.74□□□□□ -1.17
LINC00959-201ENST00000456581 A8MU10 97 aa7.73□□□□□ -1.17
LINC00959-201ENST00000456581 C1orf195Q5TG92 126 aa7.73□□□□□ -1.17
LINC00959-201ENST00000456581 PHF5AQ7RTV0 110 aaKnown RBP7.73□□□□□ -1.17
LINC00959-201ENST00000456581 C14orf177Q52M58 125 aa7.72□□□□□ -1.17
LINC00959-201ENST00000456581 FRAS1Q86XX4 4008 aa7.72□□□□□ -1.17
LINC00959-201ENST00000456581 HCG22E2RYF7 251 aa7.71□□□□□ -1.17
LINC00959-201ENST00000456581 PSPHP1O15172 72 aa7.71□□□□□ -1.18
LINC00959-201ENST00000456581 hDV103S1A0JD37 113 aa7.7□□□□□ -1.18
LINC00959-201ENST00000456581 ZCCHC13Q8WW36 166 aaKnown RBP7.7□□□□□ -1.18
LINC00959-201ENST00000456581 C9orf163Q8N9P6 203 aa7.69□□□□□ -1.18
LINC00959-201ENST00000456581 V9GYY9 64 aa7.69□□□□□ -1.18
LINC00959-201ENST00000456581 LCE6AA0A183 80 aa7.68□□□□□ -1.18
LINC00959-201ENST00000456581 UBE2AP49459 152 aa7.67□□□□□ -1.18
LINC00959-201ENST00000456581 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.66□□□□□ -1.18
LINC00959-201ENST00000456581 SEC61GP60059 68 aa7.65□□□□□ -1.18
LINC00959-201ENST00000456581 DNAH6Q9C0G6 4158 aa7.65□□□□□ -1.19
LINC00959-201ENST00000456581 DNAH17Q9UFH2 4485 aa7.64□□□□□ -1.19
LINC00959-201ENST00000456581 A0A087WTM6 91 aa7.64□□□□□ -1.19
LINC00959-201ENST00000456581 LINC00208Q96KT6 92 aa7.64□□□□□ -1.19
LINC00959-201ENST00000456581 A0A1B0GW54 56 aa7.63□□□□□ -1.19
LINC00959-201ENST00000456581 HYDINQ4G0P3 5121 aa7.63□□□□□ -1.19
LINC00959-201ENST00000456581 LY6G6CO95867 125 aa7.63□□□□□ -1.19
LINC00959-201ENST00000456581 Q6ZR54 194 aa7.62□□□□□ -1.19
LINC00959-201ENST00000456581 PRR15Q8IV56 129 aa7.6□□□□□ -1.19
LINC00959-201ENST00000456581 DNAH8Q96JB1 4490 aa7.6□□□□□ -1.19
LINC00959-201ENST00000456581 TRAV22A0A0B4J277 110 aa7.6□□□□□ -1.19
LINC00959-201ENST00000456581 Q1T7F1 81 aa7.6□□□□□ -1.19
LINC00959-201ENST00000456581 DNAH11Q96DT5 4516 aa7.59□□□□□ -1.19
LINC00959-201ENST00000456581 A8MUN3 132 aa7.59□□□□□ -1.19
LINC00959-201ENST00000456581 KRTAP29-1A8MX34 341 aaPredicted RBP7.58□□□□□ -1.2
LINC00959-201ENST00000456581 CASC2Q6XLA1 102 aa7.58□□□□□ -1.2
LINC00959-201ENST00000456581 WWC2-AS2Q96NR7 200 aa7.58□□□□□ -1.2
LINC00959-201ENST00000456581 RTL8CO15255 209 aa7.58□□□□□ -1.2
LINC00959-201ENST00000456581 H0Y9J4 135 aa7.57□□□□□ -1.2
LINC00959-201ENST00000456581 SPACA4Q8TDM5 124 aa7.57□□□□□ -1.2
LINC00959-201ENST00000456581 IGLV8-61A0A075B6I0 122 aa7.56□□□□□ -1.2
LINC00959-201ENST00000456581 IGLV9-49A0A0B4J1Y8 123 aa7.56□□□□□ -1.2
LINC00959-201ENST00000456581 H0Y9P7 68 aa7.56□□□□□ -1.2
LINC00959-201ENST00000456581 DNAH5Q8TE73 4624 aa7.56□□□□□ -1.2
LINC00959-201ENST00000456581 MP68P56378 58 aa7.55□□□□□ -1.2
LINC00959-201ENST00000456581 C1orf134Q5TEV5 83 aa7.55□□□□□ -1.2
LINC00959-201ENST00000456581 LINC00472Q9H8W2 130 aa7.55□□□□□ -1.2
LINC00959-201ENST00000456581 ANAPC11Q9NYG5 84 aa7.54□□□□□ -1.2
LINC00959-201ENST00000456581 PMAIP1Q13794 54 aa7.53□□□□□ -1.2
LINC00959-201ENST00000456581 A8MWP4 228 aa7.52□□□□□ -1.21
LINC00959-201ENST00000456581 IGLV5-52A0A0A0MRZ9 124 aa7.51□□□□□ -1.21
LINC00959-201ENST00000456581 CYP4F30PQ9H0H9 118 aa7.51□□□□□ -1.21
LINC00959-201ENST00000456581 PCOTHQ58A44 107 aa7.5□□□□□ -1.21
LINC00959-201ENST00000456581 KRTAP10-2P60368 255 aa7.5□□□□□ -1.21
LINC00959-201ENST00000456581 KRTAP13-1Q8IUC0 172 aa7.49□□□□□ -1.21
LINC00959-201ENST00000456581 MMP24-AS1A0A0U1RRL7 71 aa7.49□□□□□ -1.21
LINC00959-201ENST00000456581 PSORS1C2Q9UIG4 136 aa7.48□□□□□ -1.21
LINC00959-201ENST00000456581 FAT2Q9NYQ8 4349 aa7.48□□□□□ -1.21
LINC00959-201ENST00000456581 Q5VV11 94 aa7.48□□□□□ -1.21
LINC00959-201ENST00000456581 SPRR1BP22528 89 aa7.47□□□□□ -1.21
LINC00959-201ENST00000456581 NDUFB1O75438 58 aa7.46□□□□□ -1.21
LINC00959-201ENST00000456581 PKD1P98161 4303 aa7.46□□□□□ -1.21
LINC00959-201ENST00000456581 A0A087X002 238 aa7.46□□□□□ -1.22
LINC00959-201ENST00000456581 NOTCH2NLQ7Z3S9 236 aa7.46□□□□□ -1.22
LINC00959-201ENST00000456581 Q96NJ1 140 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms