RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 PRR4Q16378 134 aa4.99□□□□□ -1.61
HDAC9-218ENST00000456174 CHCHD10Q8WYQ3 142 aaPredicted RBP4.98□□□□□ -1.61
HDAC9-218ENST00000456174 MGAM2Q2M2H8 2515 aa4.98□□□□□ -1.61
HDAC9-218ENST00000456174 IGLV10-54A0A075B6I4 117 aa4.98□□□□□ -1.61
HDAC9-218ENST00000456174 A0A1B0GW54 56 aa4.98□□□□□ -1.61
HDAC9-218ENST00000456174 ST20-AS1Q8NBB2 130 aa4.98□□□□□ -1.61
HDAC9-218ENST00000456174 KIAA0087Q14695 138 aa4.97□□□□□ -1.61
HDAC9-218ENST00000456174 C9orf116Q5BN46 136 aaPredicted RBP4.97□□□□□ -1.61
HDAC9-218ENST00000456174 KLK12Q9UKR0 248 aa4.97□□□□□ -1.61
HDAC9-218ENST00000456174 HIGD2BQ4VC39 106 aa4.97□□□□□ -1.61
HDAC9-218ENST00000456174 WFDC10BQ8IUB3 73 aa4.97□□□□□ -1.61
HDAC9-218ENST00000456174 KCNQ1DNQ9H478 68 aa4.97□□□□□ -1.61
HDAC9-218ENST00000456174 PRR34Q9NV39 138 aa4.96□□□□□ -1.61
HDAC9-218ENST00000456174 HUWE1Q7Z6Z7 4374 aaKnown RBP4.96□□□□□ -1.62
HDAC9-218ENST00000456174 LINC01554Q52M75 96 aa4.96□□□□□ -1.62
HDAC9-218ENST00000456174 PLAC8Q9NZF1 115 aa4.96□□□□□ -1.62
HDAC9-218ENST00000456174 C3orf84H3BNL1 204 aa4.94□□□□□ -1.62
HDAC9-218ENST00000456174 LORP23490 312 aaPredicted RBP4.94□□□□□ -1.62
HDAC9-218ENST00000456174 H3BPC8 53 aa4.93□□□□□ -1.62
HDAC9-218ENST00000456174 LINC00313P59037 77 aa4.93□□□□□ -1.62
HDAC9-218ENST00000456174 LINC01558Q9Y6Z2 57 aa4.93□□□□□ -1.62
HDAC9-218ENST00000456174 ASB16-AS1Q495Z4 193 aa4.92□□□□□ -1.62
HDAC9-218ENST00000456174 LINC01556Q5JQF7 62 aa4.92□□□□□ -1.62
HDAC9-218ENST00000456174 MP68P56378 58 aa4.92□□□□□ -1.62
HDAC9-218ENST00000456174 DSCR10P59022 87 aa4.91□□□□□ -1.62
HDAC9-218ENST00000456174 IGLV5-48A0A075B6I7 105 aa4.91□□□□□ -1.62
HDAC9-218ENST00000456174 COL7A1Q02388 2944 aa4.91□□□□□ -1.62
HDAC9-218ENST00000456174 DNAH9Q9NYC9 4486 aa4.9□□□□□ -1.62
HDAC9-218ENST00000456174 A0A087X002 238 aa4.9□□□□□ -1.62
HDAC9-218ENST00000456174 PLA2G1BP04054 148 aaKnown RBP4.9□□□□□ -1.62
HDAC9-218ENST00000456174 DNAH10OSP0CZ25 163 aa4.9□□□□□ -1.62
HDAC9-218ENST00000456174 SPAG11BQ08648 103 aa4.9□□□□□ -1.62
HDAC9-218ENST00000456174 CASC2Q6XLA1 102 aa4.9□□□□□ -1.62
HDAC9-218ENST00000456174 KRTAP26-1Q6PEX3 210 aa4.9□□□□□ -1.63
HDAC9-218ENST00000456174 COA5Q86WW8 74 aa4.89□□□□□ -1.63
HDAC9-218ENST00000456174 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
HDAC9-218ENST00000456174 CNBPP62633 177 aaKnown RBP4.89□□□□□ -1.63
HDAC9-218ENST00000456174 C9orf163Q8N9P6 203 aa4.89□□□□□ -1.63
HDAC9-218ENST00000456174 IGKV2D-24A0A075B6R9 120 aa4.88□□□□□ -1.63
HDAC9-218ENST00000456174 K7EQZ3 153 aa4.88□□□□□ -1.63
HDAC9-218ENST00000456174 UNQ6190/PRO20217Q6UXQ8 127 aa4.88□□□□□ -1.63
HDAC9-218ENST00000456174 A0A1W2PNM2 257 aa4.88□□□□□ -1.63
HDAC9-218ENST00000456174 SPINK7P58062 85 aa4.86□□□□□ -1.63
HDAC9-218ENST00000456174 SPRR4Q96PI1 79 aa4.86□□□□□ -1.63
HDAC9-218ENST00000456174 STAB2Q8WWQ8 2551 aa4.86□□□□□ -1.63
HDAC9-218ENST00000456174 GVQW2A0A096LPI5 108 aaPredicted RBP4.86□□□□□ -1.63
HDAC9-218ENST00000456174 C15orf56Q8N910 161 aa4.86□□□□□ -1.63
HDAC9-218ENST00000456174 Q8NBF4 154 aa4.85□□□□□ -1.63
HDAC9-218ENST00000456174 APLNQ9ULZ1 77 aa4.85□□□□□ -1.63
HDAC9-218ENST00000456174 IGLV7-46A0A075B6I9 117 aa4.85□□□□□ -1.63
HDAC9-218ENST00000456174 CAMK2N2Q96S95 79 aa4.85□□□□□ -1.63
HDAC9-218ENST00000456174 C6orf48Q9UBA6 75 aa4.85□□□□□ -1.63
HDAC9-218ENST00000456174 H0Y9P7 68 aa4.84□□□□□ -1.63
HDAC9-218ENST00000456174 UBE2DNLQ8IWF7 75 aa4.84□□□□□ -1.64
HDAC9-218ENST00000456174 Q8N377 158 aa4.84□□□□□ -1.64
HDAC9-218ENST00000456174 NUPR2A6NF83 97 aa4.83□□□□□ -1.64
HDAC9-218ENST00000456174 KRTAP29-1A8MX34 341 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-218ENST00000456174 ADM2Q7Z4H4 148 aa4.83□□□□□ -1.64
HDAC9-218ENST00000456174 DNHD1Q96M86 4753 aa4.82□□□□□ -1.64
HDAC9-218ENST00000456174 KRTAP21-3Q3LHN1 58 aa4.82□□□□□ -1.64
HDAC9-218ENST00000456174 CASC10Q5T4H9 136 aa4.81□□□□□ -1.64
HDAC9-218ENST00000456174 RTL8CO15255 209 aa4.81□□□□□ -1.64
HDAC9-218ENST00000456174 CSMD3Q7Z407 3707 aa4.81□□□□□ -1.64
HDAC9-218ENST00000456174 PRKDCP78527 4128 aaKnown RBP4.81□□□□□ -1.64
HDAC9-218ENST00000456174 C1orf137Q5JT78 98 aa4.8□□□□□ -1.64
HDAC9-218ENST00000456174 KRTAP1-5Q9BYS1 174 aa4.8□□□□□ -1.64
HDAC9-218ENST00000456174 XAGE1AQ9HD64 81 aa4.8□□□□□ -1.64
HDAC9-218ENST00000456174 DYNC2H1Q8NCM8 4307 aaKnown RBP4.8□□□□□ -1.64
HDAC9-218ENST00000456174 DNAH1Q9P2D7 4330 aa4.8□□□□□ -1.64
HDAC9-218ENST00000456174 LYSTQ99698 3801 aa4.8□□□□□ -1.64
HDAC9-218ENST00000456174 SPAG11AQ6PDA7 123 aa4.8□□□□□ -1.64
HDAC9-218ENST00000456174 MEGF8Q7Z7M0 2845 aa4.8□□□□□ -1.64
HDAC9-218ENST00000456174 WFDC13Q8IUB5 93 aa4.79□□□□□ -1.64
HDAC9-218ENST00000456174 H0Y9J4 135 aa4.78□□□□□ -1.64
HDAC9-218ENST00000456174 LINC00476Q8WZB0 136 aa4.78□□□□□ -1.64
HDAC9-218ENST00000456174 IGLV5-37A0A075B6J1 123 aa4.77□□□□□ -1.65
HDAC9-218ENST00000456174 C7orf33Q8WU49 177 aa4.77□□□□□ -1.65
HDAC9-218ENST00000456174 PLECQ15149 4684 aaKnown RBP4.76□□□□□ -1.65
HDAC9-218ENST00000456174 DNAH7Q8WXX0 4024 aa4.76□□□□□ -1.65
HDAC9-218ENST00000456174 IGLV1-50A0A075B6I6 118 aa4.76□□□□□ -1.65
HDAC9-218ENST00000456174 DEFB116Q30KQ4 102 aa4.76□□□□□ -1.65
HDAC9-218ENST00000456174 DEFB105AQ8NG35 78 aa4.76□□□□□ -1.65
HDAC9-218ENST00000456174 RETNLBQ9BQ08 111 aa4.76□□□□□ -1.65
HDAC9-218ENST00000456174 NBDYA0A0U1RRE5 68 aa4.75□□□□□ -1.65
HDAC9-218ENST00000456174 TLX1NBP0CAT3 122 aa4.75□□□□□ -1.65
HDAC9-218ENST00000456174 TENM2Q9NT68 2774 aa4.75□□□□□ -1.65
HDAC9-218ENST00000456174 DHRS4-AS1Q9P1J3 65 aa4.75□□□□□ -1.65
HDAC9-218ENST00000456174 STARD9Q9P2P6 4700 aa4.75□□□□□ -1.65
HDAC9-218ENST00000456174 DNAH10Q8IVF4 4471 aa4.73□□□□□ -1.65
HDAC9-218ENST00000456174 HRES1P13985 223 aa4.72□□□□□ -1.65
HDAC9-218ENST00000456174 C14orf177Q52M58 125 aa4.72□□□□□ -1.65
HDAC9-218ENST00000456174 SPATA8Q6RVD6 105 aa4.71□□□□□ -1.66
HDAC9-218ENST00000456174 FAM168BA1KXE4 195 aa4.71□□□□□ -1.66
HDAC9-218ENST00000456174 Q6ZR54 194 aa4.71□□□□□ -1.66
HDAC9-218ENST00000456174 Q6ZRN7 208 aaPredicted RBP4.71□□□□□ -1.66
HDAC9-218ENST00000456174 Q6ZRX8 168 aa4.71□□□□□ -1.66
HDAC9-218ENST00000456174 KRTAP4-16G5E9R7 235 aaPredicted RBP4.7□□□□□ -1.66
HDAC9-218ENST00000456174 SEC61BP60468 96 aaKnown RBP4.7□□□□□ -1.66
HDAC9-218ENST00000456174 CSAG1Q6PB30 78 aa4.7□□□□□ -1.66
HDAC9-218ENST00000456174 ZNF706Q9Y5V0 76 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms