RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 SNRPEP62304 92 aaKnown RBP11.18□□□□□ -0.62
TNFRSF25-208ENST00000453341 LCE2BO14633 110 aa11.17□□□□□ -0.62
TNFRSF25-208ENST00000453341 IFITM1P13164 125 aa11.17□□□□□ -0.62
TNFRSF25-208ENST00000453341 C6orf99Q4VX62 202 aa11.17□□□□□ -0.62
TNFRSF25-208ENST00000453341 TEX49A0A1B0GTD5 131 aa11.15□□□□□ -0.62
TNFRSF25-208ENST00000453341 ELOF1P60002 83 aaKnown RBP11.15□□□□□ -0.62
TNFRSF25-208ENST00000453341 Q6ZVH6 145 aa11.15□□□□□ -0.62
TNFRSF25-208ENST00000453341 COPS9Q8WXC6 57 aa11.15□□□□□ -0.62
TNFRSF25-208ENST00000453341 MT2AP02795 61 aa11.14□□□□□ -0.63
TNFRSF25-208ENST00000453341 COX7BP24311 80 aa11.14□□□□□ -0.63
TNFRSF25-208ENST00000453341 A6NDN8 102 aa11.13□□□□□ -0.63
TNFRSF25-208ENST00000453341 HSBP1L1C9JCN9 74 aa11.13□□□□□ -0.63
TNFRSF25-208ENST00000453341 ATP11AUNQ6ZP68 121 aa11.11□□□□□ -0.63
TNFRSF25-208ENST00000453341 SCGB1D1O95968 90 aa11.1□□□□□ -0.63
TNFRSF25-208ENST00000453341 Q75L30 129 aa11.08□□□□□ -0.64
TNFRSF25-208ENST00000453341 TCL1BO95988 128 aa11.07□□□□□ -0.64
TNFRSF25-208ENST00000453341 MT1FP04733 61 aa11.06□□□□□ -0.64
TNFRSF25-208ENST00000453341 IGLV5-48A0A075B6I7 105 aa11.05□□□□□ -0.64
TNFRSF25-208ENST00000453341 TRBV7-6A0A0J9YX20 115 aa11.05□□□□□ -0.64
TNFRSF25-208ENST00000453341 OBSCN-AS1Q96MR7 158 aa11.05□□□□□ -0.64
TNFRSF25-208ENST00000453341 TRAV13-2A0A0B4J235 113 aa11.04□□□□□ -0.64
TNFRSF25-208ENST00000453341 A0A1B0GWB2 263 aa11.04□□□□□ -0.64
TNFRSF25-208ENST00000453341 SMIM11BQ8TCY0 68 aa11.04□□□□□ -0.64
TNFRSF25-208ENST00000453341 KRTAP9-3Q9BYQ3 159 aa11.04□□□□□ -0.64
TNFRSF25-208ENST00000453341 A4D1N5 150 aa11.02□□□□□ -0.65
TNFRSF25-208ENST00000453341 COX8AP10176 69 aa10.99□□□□□ -0.65
TNFRSF25-208ENST00000453341 C12orf57Q99622 126 aa10.97□□□□□ -0.65
TNFRSF25-208ENST00000453341 HIST1H4GQ99525 98 aa10.96□□□□□ -0.65
TNFRSF25-208ENST00000453341 C14orf144Q96I85 54 aa10.95□□□□□ -0.66
TNFRSF25-208ENST00000453341 PAM16Q9Y3D7 125 aa10.94□□□□□ -0.66
TNFRSF25-208ENST00000453341 KRTAP10-10P60014 251 aa10.93□□□□□ -0.66
TNFRSF25-208ENST00000453341 DLEU1O43261 78 aa10.92□□□□□ -0.66
TNFRSF25-208ENST00000453341 SPATA45Q537H7 98 aa10.92□□□□□ -0.66
TNFRSF25-208ENST00000453341 VAMP3Q15836 100 aa10.91□□□□□ -0.66
TNFRSF25-208ENST00000453341 NHP2Q9NX24 153 aaKnown RBP10.91□□□□□ -0.66
TNFRSF25-208ENST00000453341 TRBV20-1A0A075B6N2 111 aa10.9□□□□□ -0.66
TNFRSF25-208ENST00000453341 LINC00575Q6W349 94 aa10.9□□□□□ -0.66
TNFRSF25-208ENST00000453341 Q96NJ1 140 aa10.89□□□□□ -0.67
TNFRSF25-208ENST00000453341 VAMP8Q9BV40 100 aa10.88□□□□□ -0.67
TNFRSF25-208ENST00000453341 TRBV7-7A0A0K0K1E9 115 aa10.87□□□□□ -0.67
TNFRSF25-208ENST00000453341 KRTAP19-6Q3LI70 58 aa10.86□□□□□ -0.67
TNFRSF25-208ENST00000453341 hADV29S1A0JD25 119 aa10.85□□□□□ -0.67
TNFRSF25-208ENST00000453341 C20orf166-AS1Q96NR2 134 aa10.85□□□□□ -0.67
TNFRSF25-208ENST00000453341 Q6ZQY7 126 aa10.84□□□□□ -0.67
TNFRSF25-208ENST00000453341 C2orf91Q6ZV80 131 aa10.84□□□□□ -0.67
TNFRSF25-208ENST00000453341 HIGD1BQ9P298 99 aa10.84□□□□□ -0.67
TNFRSF25-208ENST00000453341 F8WEM9 126 aa10.83□□□□□ -0.68
TNFRSF25-208ENST00000453341 A8MUU9 505 aa10.82□□□□□ -0.68
TNFRSF25-208ENST00000453341 IGFL1Q6UW32 110 aa10.82□□□□□ -0.68
TNFRSF25-208ENST00000453341 CLEC2BQ92478 149 aa10.81□□□□□ -0.68
TNFRSF25-208ENST00000453341 LINC00846Q9NV44 126 aa10.81□□□□□ -0.68
TNFRSF25-208ENST00000453341 KRTAP6-3Q3LI67 103 aa10.8□□□□□ -0.68
TNFRSF25-208ENST00000453341 RAB37Q96AX2 223 aa10.8□□□□□ -0.68
TNFRSF25-208ENST00000453341 BVES-AS1Q5T3Y7 98 aa10.79□□□□□ -0.68
TNFRSF25-208ENST00000453341 Q6JHZ5 121 aa10.79□□□□□ -0.68
TNFRSF25-208ENST00000453341 FAM236DA0A1B0GTK5 79 aa10.77□□□□□ -0.69
TNFRSF25-208ENST00000453341 FAM236CP0DP71 79 aa10.77□□□□□ -0.69
TNFRSF25-208ENST00000453341 PYY3Q5JQD4 70 aa10.77□□□□□ -0.69
TNFRSF25-208ENST00000453341 TMA7Q9Y2S6 64 aaKnown RBP10.77□□□□□ -0.69
TNFRSF25-208ENST00000453341 CEND1Q8N111 149 aa10.76□□□□□ -0.69
TNFRSF25-208ENST00000453341 A0A0B4J2C4 111 aa10.75□□□□□ -0.69
TNFRSF25-208ENST00000453341 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF25-208ENST00000453341 KRTAP16-1A8MUX0 517 aa10.74□□□□□ -0.69
TNFRSF25-208ENST00000453341 LST1O00453 97 aa10.73□□□□□ -0.69
TNFRSF25-208ENST00000453341 NEBP20929 6669 aa10.73□□□□□ -0.69
TNFRSF25-208ENST00000453341 FXYD2P54710 66 aa10.72□□□□□ -0.69
TNFRSF25-208ENST00000453341 MPLKIPQ8TAP9 179 aa10.72□□□□□ -0.69
TNFRSF25-208ENST00000453341 FAM218AQ96MZ4 157 aa10.71□□□□□ -0.69
TNFRSF25-208ENST00000453341 OCIAD2Q56VL3 154 aa10.7□□□□□ -0.7
TNFRSF25-208ENST00000453341 SNHG12Q9BXW3 62 aa10.68□□□□□ -0.7
TNFRSF25-208ENST00000453341 PRO1854Q9UHT4 67 aa10.68□□□□□ -0.7
TNFRSF25-208ENST00000453341 H0YGX0 51 aa10.67□□□□□ -0.7
TNFRSF25-208ENST00000453341 HRES1P13985 223 aa10.67□□□□□ -0.7
TNFRSF25-208ENST00000453341 TMEM238LA0A1B0GVL6 79 aa10.66□□□□□ -0.7
TNFRSF25-208ENST00000453341 A6NJY4 79 aa10.66□□□□□ -0.7
TNFRSF25-208ENST00000453341 PPDPFLQ8WWR9 84 aa10.66□□□□□ -0.7
TNFRSF25-208ENST00000453341 H3BUT2 72 aa10.65□□□□□ -0.7
TNFRSF25-208ENST00000453341 RBM12B-AS1Q9P1G2 102 aa10.63□□□□□ -0.71
TNFRSF25-208ENST00000453341 DSCR10P59022 87 aa10.62□□□□□ -0.71
TNFRSF25-208ENST00000453341 HSD52Q0P140 79 aa10.62□□□□□ -0.71
TNFRSF25-208ENST00000453341 TRIAP1O43715 76 aa10.61□□□□□ -0.71
TNFRSF25-208ENST00000453341 SNCGO76070 127 aa10.61□□□□□ -0.71
TNFRSF25-208ENST00000453341 K7ERJ3 54 aa10.6□□□□□ -0.71
TNFRSF25-208ENST00000453341 NDUFV3P56181 108 aaKnown RBP10.58□□□□□ -0.72
TNFRSF25-208ENST00000453341 UQCR10Q9UDW1 63 aa10.57□□□□□ -0.72
TNFRSF25-208ENST00000453341 SS18L2Q9UHA2 77 aa10.56□□□□□ -0.72
TNFRSF25-208ENST00000453341 A0A1B0GX51 115 aa10.55□□□□□ -0.72
TNFRSF25-208ENST00000453341 NOTCH2NLQ7Z3S9 236 aa10.55□□□□□ -0.72
TNFRSF25-208ENST00000453341 FABP2P12104 132 aa10.54□□□□□ -0.72
TNFRSF25-208ENST00000453341 PSMB2P49721 201 aa10.53□□□□□ -0.72
TNFRSF25-208ENST00000453341 H3BMG7 143 aa10.51□□□□□ -0.73
TNFRSF25-208ENST00000453341 MUC12Q9UKN1 5478 aa10.5□□□□□ -0.73
TNFRSF25-208ENST00000453341 TEN1Q86WV5 123 aa10.48□□□□□ -0.73
TNFRSF25-208ENST00000453341 A0A087WSZ3 146 aa10.47□□□□□ -0.73
TNFRSF25-208ENST00000453341 GHRHP01286 108 aa10.47□□□□□ -0.73
TNFRSF25-208ENST00000453341 A0A1B0GV72 72 aa10.45□□□□□ -0.74
TNFRSF25-208ENST00000453341 DNAL4O96015 105 aa10.45□□□□□ -0.74
TNFRSF25-208ENST00000453341 COX6CP09669 75 aa10.45□□□□□ -0.74
TNFRSF25-208ENST00000453341 ORMDL1Q9P0S3 153 aa10.45□□□□□ -0.74
TNFRSF25-208ENST00000453341 LINC00313P59037 77 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms