RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 ZNF706Q9Y5V0 76 aaPredicted RBP12.04□□□□□ -0.48
HIGD1A-204ENST00000452906 HERC1Q15751 4861 aa12.04□□□□□ -0.48
HIGD1A-204ENST00000452906 ERC2-IT1O76042 136 aa12.03□□□□□ -0.48
HIGD1A-204ENST00000452906 NDUFV3P56181 108 aaKnown RBP12.03□□□□□ -0.48
HIGD1A-204ENST00000452906 PLA2G1BP04054 148 aaKnown RBP12.02□□□□□ -0.49
HIGD1A-204ENST00000452906 PDE6GP18545 87 aa12.02□□□□□ -0.49
HIGD1A-204ENST00000452906 RBM3P98179 157 aaKnown RBP12.02□□□□□ -0.49
HIGD1A-204ENST00000452906 DEFB105AQ8NG35 78 aa12.02□□□□□ -0.49
HIGD1A-204ENST00000452906 MYCBP2O75592 4640 aa12.02□□□□□ -0.49
HIGD1A-204ENST00000452906 DNAH8Q96JB1 4490 aa12.02□□□□□ -0.49
HIGD1A-204ENST00000452906 ZNF861PO60384 105 aa12.01□□□□□ -0.49
HIGD1A-204ENST00000452906 Q8N377 158 aa12.01□□□□□ -0.49
HIGD1A-204ENST00000452906 LINC01547P58512 204 aaPredicted RBP12□□□□□ -0.49
HIGD1A-204ENST00000452906 IGLV7-43P04211 117 aa11.99□□□□□ -0.49
HIGD1A-204ENST00000452906 ST20-AS1Q8NBB2 130 aa11.99□□□□□ -0.49
HIGD1A-204ENST00000452906 F8WEM9 126 aa11.98□□□□□ -0.49
HIGD1A-204ENST00000452906 DSCR8Q96T75 97 aa11.98□□□□□ -0.49
HIGD1A-204ENST00000452906 FAM240AA0A1B0GVK7 77 aa11.97□□□□□ -0.49
HIGD1A-204ENST00000452906 ACYP1P07311 99 aa11.97□□□□□ -0.49
HIGD1A-204ENST00000452906 SPRR1BP22528 89 aa11.97□□□□□ -0.49
HIGD1A-204ENST00000452906 C14orf132Q9NPU4 83 aa11.97□□□□□ -0.49
HIGD1A-204ENST00000452906 LOC110117498A0A087WWA1 95 aa11.95□□□□□ -0.5
HIGD1A-204ENST00000452906 A0A1B0GV72 72 aa11.91□□□□□ -0.5
HIGD1A-204ENST00000452906 CCKP06307 115 aa11.91□□□□□ -0.5
HIGD1A-204ENST00000452906 GAGE2AQ6NT46 116 aa11.91□□□□□ -0.5
HIGD1A-204ENST00000452906 TRBV7-4A0A0J9YYF1 115 aa11.9□□□□□ -0.5
HIGD1A-204ENST00000452906 SPRR4Q96PI1 79 aa11.9□□□□□ -0.5
HIGD1A-204ENST00000452906 J3QL48 77 aa11.89□□□□□ -0.51
HIGD1A-204ENST00000452906 Q6ZQT0 140 aa11.88□□□□□ -0.51
HIGD1A-204ENST00000452906 KRTAP29-1A8MX34 341 aaPredicted RBP11.87□□□□□ -0.51
HIGD1A-204ENST00000452906 LINC00483Q53H64 154 aa11.87□□□□□ -0.51
HIGD1A-204ENST00000452906 RPL37AP61513 92 aaKnown RBP11.86□□□□□ -0.51
HIGD1A-204ENST00000452906 SMIM29Q86T20 159 aa11.86□□□□□ -0.51
HIGD1A-204ENST00000452906 IGLV8-61A0A075B6I0 122 aa11.85□□□□□ -0.51
HIGD1A-204ENST00000452906 Q6JHZ5 121 aa11.85□□□□□ -0.51
HIGD1A-204ENST00000452906 C3orf22Q8N5N4 141 aa11.85□□□□□ -0.51
HIGD1A-204ENST00000452906 A0A1B0GW54 56 aa11.84□□□□□ -0.51
HIGD1A-204ENST00000452906 KRTAP10-4P60372 401 aaPredicted RBP11.83□□□□□ -0.52
HIGD1A-204ENST00000452906 VPS25Q9BRG1 176 aa11.83□□□□□ -0.52
HIGD1A-204ENST00000452906 SPINK6Q6UWN8 80 aa11.77□□□□□ -0.53
HIGD1A-204ENST00000452906 OXTP01178 125 aa11.76□□□□□ -0.53
HIGD1A-204ENST00000452906 FAM229BQ4G0N7 80 aa11.75□□□□□ -0.53
HIGD1A-204ENST00000452906 Q8NBF4 154 aa11.75□□□□□ -0.53
HIGD1A-204ENST00000452906 C9orf153Q5TBE3 101 aa11.74□□□□□ -0.53
HIGD1A-204ENST00000452906 UBL5Q9BZL1 73 aa11.74□□□□□ -0.53
HIGD1A-204ENST00000452906 CDIP1Q9H305 208 aa11.74□□□□□ -0.53
HIGD1A-204ENST00000452906 IGFL1Q6UW32 110 aa11.73□□□□□ -0.53
HIGD1A-204ENST00000452906 IGLV9-49A0A0B4J1Y8 123 aa11.71□□□□□ -0.53
HIGD1A-204ENST00000452906 LINC00643Q86TS7 51 aa11.7□□□□□ -0.54
HIGD1A-204ENST00000452906 LINC00846Q9NV44 126 aa11.7□□□□□ -0.54
HIGD1A-204ENST00000452906 LRP1Q07954 4544 aaKnown RBP11.69□□□□□ -0.54
HIGD1A-204ENST00000452906 Q6Q795 121 aa11.69□□□□□ -0.54
HIGD1A-204ENST00000452906 A0A1W2PNM2 257 aa11.68□□□□□ -0.54
HIGD1A-204ENST00000452906 CRYGAP11844 174 aa11.68□□□□□ -0.54
HIGD1A-204ENST00000452906 PKHD1L1Q86WI1 4243 aa11.67□□□□□ -0.54
HIGD1A-204ENST00000452906 MOBPQ13875 183 aa11.66□□□□□ -0.54
HIGD1A-204ENST00000452906 ATP5EP2Q5VTU8 51 aa11.66□□□□□ -0.54
HIGD1A-204ENST00000452906 SSBP3-AS1Q7Z2R9 100 aa11.66□□□□□ -0.54
HIGD1A-204ENST00000452906 SIGMAR1Q99720 223 aa11.65□□□□□ -0.54
HIGD1A-204ENST00000452906 FAT3Q8TDW7 4589 aa11.64□□□□□ -0.55
HIGD1A-204ENST00000452906 TRBV7-7A0A0K0K1E9 115 aa11.62□□□□□ -0.55
HIGD1A-204ENST00000452906 ANAPC11Q9NYG5 84 aa11.62□□□□□ -0.55
HIGD1A-204ENST00000452906 NREPQ16612 68 aa11.61□□□□□ -0.55
HIGD1A-204ENST00000452906 Q6ZVQ6 151 aa11.6□□□□□ -0.55
HIGD1A-204ENST00000452906 KRTAP1-4P0C5Y4 121 aa11.59□□□□□ -0.55
HIGD1A-204ENST00000452906 CD164Q04900 197 aa11.59□□□□□ -0.55
HIGD1A-204ENST00000452906 SS18L2Q9UHA2 77 aa11.57□□□□□ -0.56
HIGD1A-204ENST00000452906 HMCN2Q8NDA2 5059 aa11.55□□□□□ -0.56
HIGD1A-204ENST00000452906 A0A087WSZ3 146 aa11.55□□□□□ -0.56
HIGD1A-204ENST00000452906 IMUPQ9GZP8 106 aa11.55□□□□□ -0.56
HIGD1A-204ENST00000452906 A0A0G2JQZ4 141 aa11.54□□□□□ -0.56
HIGD1A-204ENST00000452906 MT-ATP8P03928 68 aa11.54□□□□□ -0.56
HIGD1A-204ENST00000452906 CXCL6P80162 114 aa11.54□□□□□ -0.56
HIGD1A-204ENST00000452906 A0A087X002 238 aa11.53□□□□□ -0.56
HIGD1A-204ENST00000452906 MT1HL1P0DM35 61 aa11.51□□□□□ -0.57
HIGD1A-204ENST00000452906 KRTAP13-2Q52LG2 175 aa11.51□□□□□ -0.57
HIGD1A-204ENST00000452906 TYMSOSQ8TAI1 123 aa11.5□□□□□ -0.57
HIGD1A-204ENST00000452906 BPY2O14599 106 aa11.49□□□□□ -0.57
HIGD1A-204ENST00000452906 IGKV3D-7A0A0C4DH55 119 aa11.46□□□□□ -0.57
HIGD1A-204ENST00000452906 C4orf48Q5BLP8 95 aa11.46□□□□□ -0.57
HIGD1A-204ENST00000452906 HRCT1Q6UXD1 115 aa11.45□□□□□ -0.58
HIGD1A-204ENST00000452906 J3KT08 172 aa11.44□□□□□ -0.58
HIGD1A-204ENST00000452906 SCGB1A1P11684 91 aa11.43□□□□□ -0.58
HIGD1A-204ENST00000452906 LIMD2Q9BT23 127 aa11.43□□□□□ -0.58
HIGD1A-204ENST00000452906 SPAG11AQ6PDA7 123 aa11.42□□□□□ -0.58
HIGD1A-204ENST00000452906 PRR26Q8N8Z3 221 aa11.41□□□□□ -0.58
HIGD1A-204ENST00000452906 HIST1H4AP62805 103 aaKnown RBP11.4□□□□□ -0.58
HIGD1A-204ENST00000452906 Q5XG85 94 aa11.4□□□□□ -0.58
HIGD1A-204ENST00000452906 SPINK1P00995 79 aa11.39□□□□□ -0.59
HIGD1A-204ENST00000452906 ASB16-AS1Q495Z4 193 aa11.39□□□□□ -0.59
HIGD1A-204ENST00000452906 RPS29P62273 56 aaKnown RBP11.38□□□□□ -0.59
HIGD1A-204ENST00000452906 LINC00472Q9H8W2 130 aa11.38□□□□□ -0.59
HIGD1A-204ENST00000452906 UBR4Q5T4S7 5183 aa11.38□□□□□ -0.59
HIGD1A-204ENST00000452906 LINC00304Q8N9R0 145 aa11.37□□□□□ -0.59
HIGD1A-204ENST00000452906 TNXBP22105 4242 aa11.35□□□□□ -0.59
HIGD1A-204ENST00000452906 NDUFB1O75438 58 aa11.32□□□□□ -0.6
HIGD1A-204ENST00000452906 A8MWP4 228 aa11.3□□□□□ -0.6
HIGD1A-204ENST00000452906 DSCR10P59022 87 aa11.3□□□□□ -0.6
HIGD1A-204ENST00000452906 IGKV4-1P06312 121 aa11.29□□□□□ -0.6
HIGD1A-204ENST00000452906 KRTAP10-8P60410 259 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms