RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 ATP5EP2Q5VTU8 51 aa5.38□□□□□ -1.55
COL8A1-203ENST00000452013 FAM19A1Q7Z5A9 133 aa5.38□□□□□ -1.55
COL8A1-203ENST00000452013 TRBV7-6A0A0J9YX20 115 aa5.37□□□□□ -1.55
COL8A1-203ENST00000452013 PRYO14603 147 aa5.37□□□□□ -1.55
COL8A1-203ENST00000452013 KRTAP10-8P60410 259 aa5.37□□□□□ -1.55
COL8A1-203ENST00000452013 KCNQ1DNQ9H478 68 aa5.37□□□□□ -1.55
COL8A1-203ENST00000452013 MT1HL1P0DM35 61 aa5.36□□□□□ -1.55
COL8A1-203ENST00000452013 Q6JHZ5 121 aa5.36□□□□□ -1.55
COL8A1-203ENST00000452013 TRBV10-3A0A0K0K1G6 114 aa5.35□□□□□ -1.55
COL8A1-203ENST00000452013 CCKP06307 115 aa5.35□□□□□ -1.55
COL8A1-203ENST00000452013 GAGE2AQ6NT46 116 aa5.35□□□□□ -1.55
COL8A1-203ENST00000452013 KRTAP13-1Q8IUC0 172 aa5.35□□□□□ -1.55
COL8A1-203ENST00000452013 ETDCA0A1B0GVM5 59 aa5.34□□□□□ -1.55
COL8A1-203ENST00000452013 ATOX1O00244 68 aa5.34□□□□□ -1.55
COL8A1-203ENST00000452013 IGLV6-57P01721 117 aa5.33□□□□□ -1.56
COL8A1-203ENST00000452013 SPRR1AP35321 89 aa5.33□□□□□ -1.56
COL8A1-203ENST00000452013 PRLHP81277 87 aa5.33□□□□□ -1.56
COL8A1-203ENST00000452013 LINC00575Q6W349 94 aa5.33□□□□□ -1.56
COL8A1-203ENST00000452013 PRR26Q8N8Z3 221 aa5.33□□□□□ -1.56
COL8A1-203ENST00000452013 PKHD1L1Q86WI1 4243 aa5.33□□□□□ -1.56
COL8A1-203ENST00000452013 MYCBP2O75592 4640 aa5.32□□□□□ -1.56
COL8A1-203ENST00000452013 LOC110117498A0A087WWA1 95 aa5.32□□□□□ -1.56
COL8A1-203ENST00000452013 hADV29S1A0JD25 119 aa5.32□□□□□ -1.56
COL8A1-203ENST00000452013 UQCRQO14949 82 aa5.32□□□□□ -1.56
COL8A1-203ENST00000452013 KRTAP1-4P0C5Y4 121 aa5.32□□□□□ -1.56
COL8A1-203ENST00000452013 SMCR5Q8TEV8 140 aa5.32□□□□□ -1.56
COL8A1-203ENST00000452013 HIGD2AQ9BW72 106 aa5.32□□□□□ -1.56
COL8A1-203ENST00000452013 FLG2Q5D862 2391 aaPredicted RBP5.31□□□□□ -1.56
COL8A1-203ENST00000452013 TRAV23DV6A0A075B6W5 121 aa5.31□□□□□ -1.56
COL8A1-203ENST00000452013 FAM236AA0A1B0GUQ0 79 aa5.31□□□□□ -1.56
COL8A1-203ENST00000452013 FAM236BA0A1B0GV22 79 aa5.31□□□□□ -1.56
COL8A1-203ENST00000452013 CRYGAP11844 174 aa5.31□□□□□ -1.56
COL8A1-203ENST00000452013 HIST1H4AP62805 103 aaKnown RBP5.31□□□□□ -1.56
COL8A1-203ENST00000452013 C6orf99Q4VX62 202 aa5.31□□□□□ -1.56
COL8A1-203ENST00000452013 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.31□□□□□ -1.56
COL8A1-203ENST00000452013 C14orf132Q9NPU4 83 aa5.31□□□□□ -1.56
COL8A1-203ENST00000452013 ZNF706Q9Y5V0 76 aaPredicted RBP5.31□□□□□ -1.56
COL8A1-203ENST00000452013 B5MCH6 92 aa5.3□□□□□ -1.56
COL8A1-203ENST00000452013 KRTAP4-16G5E9R7 235 aaPredicted RBP5.3□□□□□ -1.56
COL8A1-203ENST00000452013 RBM3P98179 157 aaKnown RBP5.3□□□□□ -1.56
COL8A1-203ENST00000452013 C3orf22Q8N5N4 141 aa5.3□□□□□ -1.56
COL8A1-203ENST00000452013 UBL5Q9BZL1 73 aa5.3□□□□□ -1.56
COL8A1-203ENST00000452013 FAT3Q8TDW7 4589 aa5.3□□□□□ -1.56
COL8A1-203ENST00000452013 ZNF73O43830 326 aaPredicted RBP5.29□□□□□ -1.56
COL8A1-203ENST00000452013 FAM229BQ4G0N7 80 aa5.29□□□□□ -1.56
COL8A1-203ENST00000452013 LRP1Q07954 4544 aaKnown RBP5.29□□□□□ -1.56
COL8A1-203ENST00000452013 COX7CP15954 63 aa5.28□□□□□ -1.56
COL8A1-203ENST00000452013 TYMSOSQ8TAI1 123 aa5.28□□□□□ -1.56
COL8A1-203ENST00000452013 LINC00846Q9NV44 126 aa5.28□□□□□ -1.56
COL8A1-203ENST00000452013 A0A1B0GW54 56 aa5.27□□□□□ -1.57
COL8A1-203ENST00000452013 CCDC179H3BU77 68 aa5.27□□□□□ -1.57
COL8A1-203ENST00000452013 COX7BP24311 80 aa5.27□□□□□ -1.57
COL8A1-203ENST00000452013 Q6ZRX8 168 aa5.27□□□□□ -1.57
COL8A1-203ENST00000452013 SPRR4Q96PI1 79 aa5.27□□□□□ -1.57
COL8A1-203ENST00000452013 DSCR8Q96T75 97 aa5.27□□□□□ -1.57
COL8A1-203ENST00000452013 ANAPC11Q9NYG5 84 aa5.27□□□□□ -1.57
COL8A1-203ENST00000452013 ELOF1P60002 83 aaKnown RBP5.26□□□□□ -1.57
COL8A1-203ENST00000452013 SMIM20Q8N5G0 67 aa5.26□□□□□ -1.57
COL8A1-203ENST00000452013 A0A087X002 238 aa5.25□□□□□ -1.57
COL8A1-203ENST00000452013 C9orf153Q5TBE3 101 aa5.25□□□□□ -1.57
COL8A1-203ENST00000452013 Q6ZQT0 140 aa5.25□□□□□ -1.57
COL8A1-203ENST00000452013 SERP2Q8N6R1 65 aa5.25□□□□□ -1.57
COL8A1-203ENST00000452013 DHRS4-AS1Q9P1J3 65 aa5.25□□□□□ -1.57
COL8A1-203ENST00000452013 LAMTOR3Q9UHA4 124 aa5.25□□□□□ -1.57
COL8A1-203ENST00000452013 DMBT1Q9UGM3 2413 aaPredicted RBP5.25□□□□□ -1.57
COL8A1-203ENST00000452013 CXCL6P80162 114 aa5.24□□□□□ -1.57
COL8A1-203ENST00000452013 Q9BRP9 147 aa5.24□□□□□ -1.57
COL8A1-203ENST00000452013 ERC2-IT1O76042 136 aa5.23□□□□□ -1.57
COL8A1-203ENST00000452013 KRTAP13-2Q52LG2 175 aa5.23□□□□□ -1.57
COL8A1-203ENST00000452013 HERC1Q15751 4861 aa5.22□□□□□ -1.57
COL8A1-203ENST00000452013 LINC00483Q53H64 154 aa5.22□□□□□ -1.57
COL8A1-203ENST00000452013 Q6ZQY7 126 aa5.22□□□□□ -1.57
COL8A1-203ENST00000452013 TRBV7-4A0A0J9YYF1 115 aa5.21□□□□□ -1.58
COL8A1-203ENST00000452013 C4orf48Q5BLP8 95 aa5.21□□□□□ -1.58
COL8A1-203ENST00000452013 SS18L2Q9UHA2 77 aa5.21□□□□□ -1.58
COL8A1-203ENST00000452013 IGKV3D-7A0A0C4DH55 119 aa5.2□□□□□ -1.58
COL8A1-203ENST00000452013 TMEM258P61165 79 aa5.2□□□□□ -1.58
COL8A1-203ENST00000452013 SPAG11AQ6PDA7 123 aa5.2□□□□□ -1.58
COL8A1-203ENST00000452013 SSBP3-AS1Q7Z2R9 100 aa5.2□□□□□ -1.58
COL8A1-203ENST00000452013 LINC00304Q8N9R0 145 aa5.2□□□□□ -1.58
COL8A1-203ENST00000452013 RPS28P62857 69 aaKnown RBP5.19□□□□□ -1.58
COL8A1-203ENST00000452013 ST20-AS1Q8NBB2 130 aa5.19□□□□□ -1.58
COL8A1-203ENST00000452013 TNXBP22105 4242 aa5.19□□□□□ -1.58
COL8A1-203ENST00000452013 IGLV9-49A0A0B4J1Y8 123 aa5.17□□□□□ -1.58
COL8A1-203ENST00000452013 SPRR1BP22528 89 aa5.17□□□□□ -1.58
COL8A1-203ENST00000452013 Q6ZVQ6 151 aa5.17□□□□□ -1.58
COL8A1-203ENST00000452013 DEFB105AQ8NG35 78 aa5.17□□□□□ -1.58
COL8A1-203ENST00000452013 TRAV7A0A075B6U4 112 aa5.16□□□□□ -1.58
COL8A1-203ENST00000452013 LINC01547P58512 204 aaPredicted RBP5.16□□□□□ -1.58
COL8A1-203ENST00000452013 SPINK1P00995 79 aa5.15□□□□□ -1.59
COL8A1-203ENST00000452013 MOBPQ13875 183 aa5.15□□□□□ -1.59
COL8A1-203ENST00000452013 PRR4Q16378 134 aa5.15□□□□□ -1.59
COL8A1-203ENST00000452013 Q8NBF4 154 aa5.15□□□□□ -1.59
COL8A1-203ENST00000452013 IGLV5-48A0A075B6I7 105 aa5.14□□□□□ -1.59
COL8A1-203ENST00000452013 J3KT08 172 aa5.14□□□□□ -1.59
COL8A1-203ENST00000452013 NDUFC1O43677 76 aa5.14□□□□□ -1.59
COL8A1-203ENST00000452013 A0A087WVE0 104 aa5.13□□□□□ -1.59
COL8A1-203ENST00000452013 SVIPQ8NHG7 77 aa5.13□□□□□ -1.59
COL8A1-203ENST00000452013 NREPQ16612 68 aa5.11□□□□□ -1.59
COL8A1-203ENST00000452013 ATP5EP56381 51 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms