RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SPRR1AP35321 89 aa9.35□□□□□ -0.91
SF1-211ENST00000448404 REG3GQ6UW15 175 aa9.35□□□□□ -0.91
SF1-211ENST00000448404 CXCL6P80162 114 aa9.34□□□□□ -0.91
SF1-211ENST00000448404 PRYO14603 147 aa9.33□□□□□ -0.92
SF1-211ENST00000448404 NREPQ16612 68 aa9.33□□□□□ -0.92
SF1-211ENST00000448404 PLA2G2DQ9UNK4 145 aa9.33□□□□□ -0.92
SF1-211ENST00000448404 A0A1W2PNM2 257 aa9.33□□□□□ -0.92
SF1-211ENST00000448404 FBN3Q75N90 2809 aa9.33□□□□□ -0.92
SF1-211ENST00000448404 IGLV5-37A0A075B6J1 123 aa9.32□□□□□ -0.92
SF1-211ENST00000448404 TMEM254Q8TBM7 123 aa9.32□□□□□ -0.92
SF1-211ENST00000448404 NDUFC1O43677 76 aa9.31□□□□□ -0.92
SF1-211ENST00000448404 C16orf90A8MZG2 172 aa9.31□□□□□ -0.92
SF1-211ENST00000448404 DEFB116Q30KQ4 102 aa9.3□□□□□ -0.92
SF1-211ENST00000448404 C1orf195Q5TG92 126 aa9.3□□□□□ -0.92
SF1-211ENST00000448404 DHRS4-AS1Q9P1J3 65 aa9.3□□□□□ -0.92
SF1-211ENST00000448404 NBDYA0A0U1RRE5 68 aa9.29□□□□□ -0.92
SF1-211ENST00000448404 PDE6GP18545 87 aa9.29□□□□□ -0.92
SF1-211ENST00000448404 C1orf137Q5JT78 98 aa9.29□□□□□ -0.92
SF1-211ENST00000448404 V9GYY9 64 aa9.29□□□□□ -0.92
SF1-211ENST00000448404 LRCOL1A6NCL2 159 aa9.29□□□□□ -0.92
SF1-211ENST00000448404 CNBPP62633 177 aaKnown RBP9.28□□□□□ -0.92
SF1-211ENST00000448404 SEC61GP60059 68 aa9.27□□□□□ -0.93
SF1-211ENST00000448404 SMIM29Q86T20 159 aa9.27□□□□□ -0.93
SF1-211ENST00000448404 IGLV5-48A0A075B6I7 105 aa9.27□□□□□ -0.93
SF1-211ENST00000448404 HECTD4Q9Y4D8 3996 aa9.26□□□□□ -0.93
SF1-211ENST00000448404 TNP2Q05952 138 aa9.25□□□□□ -0.93
SF1-211ENST00000448404 H3BQ85 93 aa9.25□□□□□ -0.93
SF1-211ENST00000448404 ATP5EP56381 51 aaPredicted RBP9.25□□□□□ -0.93
SF1-211ENST00000448404 Q6ZRN7 208 aaPredicted RBP9.25□□□□□ -0.93
SF1-211ENST00000448404 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.25□□□□□ -0.93
SF1-211ENST00000448404 LINC00476Q8WZB0 136 aa9.24□□□□□ -0.93
SF1-211ENST00000448404 DNAH6Q9C0G6 4158 aa9.23□□□□□ -0.93
SF1-211ENST00000448404 IGKV4-1P06312 121 aa9.22□□□□□ -0.93
SF1-211ENST00000448404 C9orf163Q8N9P6 203 aa9.22□□□□□ -0.93
SF1-211ENST00000448404 NUPR2A6NF83 97 aa9.2□□□□□ -0.94
SF1-211ENST00000448404 IGFL1Q6UW32 110 aa9.2□□□□□ -0.94
SF1-211ENST00000448404 DNAH17Q9UFH2 4485 aa9.19□□□□□ -0.94
SF1-211ENST00000448404 Q8NBF4 154 aa9.19□□□□□ -0.94
SF1-211ENST00000448404 OCR1Q9BZK8 76 aa9.19□□□□□ -0.94
SF1-211ENST00000448404 DNAH8Q96JB1 4490 aa9.18□□□□□ -0.94
SF1-211ENST00000448404 HYDINQ4G0P3 5121 aa9.18□□□□□ -0.94
SF1-211ENST00000448404 UBE2AP49459 152 aa9.16□□□□□ -0.94
SF1-211ENST00000448404 A0A087WSZ3 146 aa9.16□□□□□ -0.94
SF1-211ENST00000448404 FAM30AQ9NZY2 134 aa9.15□□□□□ -0.94
SF1-211ENST00000448404 K7EQZ3 153 aa9.15□□□□□ -0.95
SF1-211ENST00000448404 RPL37AP61513 92 aaKnown RBP9.15□□□□□ -0.95
SF1-211ENST00000448404 ANAPC11Q9NYG5 84 aa9.15□□□□□ -0.95
SF1-211ENST00000448404 C14orf177Q52M58 125 aa9.14□□□□□ -0.95
SF1-211ENST00000448404 A0A087WTM6 91 aa9.13□□□□□ -0.95
SF1-211ENST00000448404 DSCR10P59022 87 aa9.13□□□□□ -0.95
SF1-211ENST00000448404 DNAH11Q96DT5 4516 aa9.12□□□□□ -0.95
SF1-211ENST00000448404 LY6G6CO95867 125 aa9.1□□□□□ -0.95
SF1-211ENST00000448404 SPRR4Q96PI1 79 aa9.1□□□□□ -0.95
SF1-211ENST00000448404 IGLV9-49A0A0B4J1Y8 123 aa9.08□□□□□ -0.96
SF1-211ENST00000448404 PSPHP1O15172 72 aa9.08□□□□□ -0.96
SF1-211ENST00000448404 RTL8CO15255 209 aa9.08□□□□□ -0.96
SF1-211ENST00000448404 PRR4Q16378 134 aa9.08□□□□□ -0.96
SF1-211ENST00000448404 hDV103S1A0JD37 113 aa9.07□□□□□ -0.96
SF1-211ENST00000448404 SPACA4Q8TDM5 124 aa9.07□□□□□ -0.96
SF1-211ENST00000448404 C1orf64Q8NEQ6 169 aa9.07□□□□□ -0.96
SF1-211ENST00000448404 DNAH5Q8TE73 4624 aa9.06□□□□□ -0.96
SF1-211ENST00000448404 WFDC13Q8IUB5 93 aa9.06□□□□□ -0.96
SF1-211ENST00000448404 PMAIP1Q13794 54 aa9.04□□□□□ -0.96
SF1-211ENST00000448404 Q6ZR54 194 aa9.03□□□□□ -0.96
SF1-211ENST00000448404 PSORS1C2Q9UIG4 136 aa9.02□□□□□ -0.96
SF1-211ENST00000448404 KRTAP13-1Q8IUC0 172 aa9.01□□□□□ -0.97
SF1-211ENST00000448404 PRR15Q8IV56 129 aa9.01□□□□□ -0.97
SF1-211ENST00000448404 IGLV5-52A0A0A0MRZ9 124 aa9□□□□□ -0.97
SF1-211ENST00000448404 Q1T7F1 81 aa8.99□□□□□ -0.97
SF1-211ENST00000448404 LRP1BQ9NZR2 4599 aa8.99□□□□□ -0.97
SF1-211ENST00000448404 TRAV22A0A0B4J277 110 aa8.98□□□□□ -0.97
SF1-211ENST00000448404 KRTAP10-2P60368 255 aa8.98□□□□□ -0.97
SF1-211ENST00000448404 ALMS1Q8TCU4 4167 aa8.98□□□□□ -0.97
SF1-211ENST00000448404 C1orf134Q5TEV5 83 aa8.98□□□□□ -0.97
SF1-211ENST00000448404 IGLV8-61A0A075B6I0 122 aa8.97□□□□□ -0.97
SF1-211ENST00000448404 A8MU10 97 aa8.96□□□□□ -0.97
SF1-211ENST00000448404 H0Y9J4 135 aa8.95□□□□□ -0.98
SF1-211ENST00000448404 A8MUN3 132 aa8.94□□□□□ -0.98
SF1-211ENST00000448404 SPRR1BP22528 89 aa8.94□□□□□ -0.98
SF1-211ENST00000448404 LCE6AA0A183 80 aa8.94□□□□□ -0.98
SF1-211ENST00000448404 HCG22E2RYF7 251 aa8.94□□□□□ -0.98
SF1-211ENST00000448404 ZCCHC13Q8WW36 166 aaKnown RBP8.94□□□□□ -0.98
SF1-211ENST00000448404 MOBPQ13875 183 aa8.93□□□□□ -0.98
SF1-211ENST00000448404 FAT2Q9NYQ8 4349 aa8.93□□□□□ -0.98
SF1-211ENST00000448404 PKHD1P08F94 4074 aa8.92□□□□□ -0.98
SF1-211ENST00000448404 A0A1B0GW54 56 aa8.9□□□□□ -0.98
SF1-211ENST00000448404 LINC00472Q9H8W2 130 aa8.9□□□□□ -0.99
SF1-211ENST00000448404 PKD1P98161 4303 aa8.88□□□□□ -0.99
SF1-211ENST00000448404 PLAC8Q9NZF1 115 aa8.88□□□□□ -0.99
SF1-211ENST00000448404 WWC2-AS2Q96NR7 200 aa8.87□□□□□ -0.99
SF1-211ENST00000448404 CIRBP-AS1Q8TBR5 109 aa8.87□□□□□ -0.99
SF1-211ENST00000448404 ZNF861PO60384 105 aa8.85□□□□□ -0.99
SF1-211ENST00000448404 CYP4F30PQ9H0H9 118 aa8.85□□□□□ -0.99
SF1-211ENST00000448404 VPS13BQ7Z7G8 4022 aa8.84□□□□□ -0.99
SF1-211ENST00000448404 CASC2Q6XLA1 102 aa8.84□□□□□ -1
SF1-211ENST00000448404 Q5VV11 94 aa8.83□□□□□ -1
SF1-211ENST00000448404 Q96NJ1 140 aa8.83□□□□□ -1
SF1-211ENST00000448404 LINC00208Q96KT6 92 aa8.83□□□□□ -1
SF1-211ENST00000448404 CD164Q04900 197 aa8.82□□□□□ -1
SF1-211ENST00000448404 SPINK6Q6UWN8 80 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms