RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 ORMDL1Q9P0S3 153 aa10.33□□□□□ -0.76
SGCE-206ENST00000445866 LAMTOR3Q9UHA4 124 aa10.33□□□□□ -0.76
SGCE-206ENST00000445866 SPCS1Q9Y6A9 102 aa10.33□□□□□ -0.76
SGCE-206ENST00000445866 OXTP01178 125 aa10.31□□□□□ -0.76
SGCE-206ENST00000445866 MYCBP2O75592 4640 aa10.31□□□□□ -0.76
SGCE-206ENST00000445866 UBE2V1Q13404 147 aa10.31□□□□□ -0.76
SGCE-206ENST00000445866 C3orf22Q8N5N4 141 aa10.31□□□□□ -0.76
SGCE-206ENST00000445866 PPDPFLQ8WWR9 84 aa10.31□□□□□ -0.76
SGCE-206ENST00000445866 LRP1Q07954 4544 aaKnown RBP10.3□□□□□ -0.76
SGCE-206ENST00000445866 IGLV9-49A0A0B4J1Y8 123 aa10.3□□□□□ -0.76
SGCE-206ENST00000445866 H3BMG7 143 aa10.3□□□□□ -0.76
SGCE-206ENST00000445866 BAALC-AS2P0C853 105 aa10.3□□□□□ -0.76
SGCE-206ENST00000445866 SMIM29Q86T20 159 aa10.3□□□□□ -0.76
SGCE-206ENST00000445866 H3BQ85 93 aa10.29□□□□□ -0.76
SGCE-206ENST00000445866 TMEM256-PLSCR3K7ERE1 68 aa10.28□□□□□ -0.76
SGCE-206ENST00000445866 KRTAP13-2Q52LG2 175 aa10.28□□□□□ -0.76
SGCE-206ENST00000445866 TYMSOSQ8TAI1 123 aa10.28□□□□□ -0.76
SGCE-206ENST00000445866 C9JAW5 83 aa10.27□□□□□ -0.77
SGCE-206ENST00000445866 KRTAP10-8P60410 259 aa10.27□□□□□ -0.77
SGCE-206ENST00000445866 FAT3Q8TDW7 4589 aa10.27□□□□□ -0.77
SGCE-206ENST00000445866 KRTAP29-1A8MX34 341 aaPredicted RBP10.26□□□□□ -0.77
SGCE-206ENST00000445866 K7EP34 96 aa10.25□□□□□ -0.77
SGCE-206ENST00000445866 MOBPQ13875 183 aa10.25□□□□□ -0.77
SGCE-206ENST00000445866 C9orf153Q5TBE3 101 aa10.25□□□□□ -0.77
SGCE-206ENST00000445866 F8WEM9 126 aa10.25□□□□□ -0.77
SGCE-206ENST00000445866 NDUFV3P56181 108 aaKnown RBP10.25□□□□□ -0.77
SGCE-206ENST00000445866 GTF2H5Q6ZYL4 71 aa10.24□□□□□ -0.77
SGCE-206ENST00000445866 SSBP3-AS1Q7Z2R9 100 aa10.22□□□□□ -0.77
SGCE-206ENST00000445866 J3QL48 77 aa10.22□□□□□ -0.77
SGCE-206ENST00000445866 MT1HL1P0DM35 61 aa10.21□□□□□ -0.78
SGCE-206ENST00000445866 MTURNQ8N3F0 131 aa10.21□□□□□ -0.78
SGCE-206ENST00000445866 ANKRD29Q8N6D5 301 aa10.2□□□□□ -0.78
SGCE-206ENST00000445866 Q8NBF4 154 aa10.2□□□□□ -0.78
SGCE-206ENST00000445866 A0A1B0GV72 72 aa10.18□□□□□ -0.78
SGCE-206ENST00000445866 PCLOQ9Y6V0 5065 aa10.18□□□□□ -0.78
SGCE-206ENST00000445866 TNXBP22105 4242 aa10.16□□□□□ -0.78
SGCE-206ENST00000445866 IGLV8-61A0A075B6I0 122 aa10.16□□□□□ -0.78
SGCE-206ENST00000445866 A0A0G2JQZ4 141 aa10.15□□□□□ -0.78
SGCE-206ENST00000445866 H3BT86 120 aa10.15□□□□□ -0.78
SGCE-206ENST00000445866 C4orf48Q5BLP8 95 aa10.15□□□□□ -0.78
SGCE-206ENST00000445866 Q6JHZ5 121 aa10.15□□□□□ -0.79
SGCE-206ENST00000445866 LINC00304Q8N9R0 145 aa10.14□□□□□ -0.79
SGCE-206ENST00000445866 RBM3P98179 157 aaKnown RBP10.13□□□□□ -0.79
SGCE-206ENST00000445866 SMCPP49901 116 aaPredicted RBP10.12□□□□□ -0.79
SGCE-206ENST00000445866 IGFL1Q6UW32 110 aa10.12□□□□□ -0.79
SGCE-206ENST00000445866 PRO0461Q9UI25 63 aa10.12□□□□□ -0.79
SGCE-206ENST00000445866 HRCT1Q6UXD1 115 aa10.11□□□□□ -0.79
SGCE-206ENST00000445866 F8W1H4 67 aa10.1□□□□□ -0.79
SGCE-206ENST00000445866 JMJD7-PLA2G4BH0Y9G9 81 aa10.1□□□□□ -0.79
SGCE-206ENST00000445866 SPAG11AQ6PDA7 123 aa10.1□□□□□ -0.79
SGCE-206ENST00000445866 DSCR8Q96T75 97 aa10.09□□□□□ -0.79
SGCE-206ENST00000445866 SPINK1P00995 79 aa10.06□□□□□ -0.8
SGCE-206ENST00000445866 CD164Q04900 197 aa10.06□□□□□ -0.8
SGCE-206ENST00000445866 OBSCN-AS1Q96MR7 158 aa10.05□□□□□ -0.8
SGCE-206ENST00000445866 DMBT1Q9UGM3 2413 aaPredicted RBP10.04□□□□□ -0.8
SGCE-206ENST00000445866 TRBV7-4A0A0J9YYF1 115 aa10.03□□□□□ -0.8
SGCE-206ENST00000445866 C14orf132Q9NPU4 83 aa10.03□□□□□ -0.8
SGCE-206ENST00000445866 TEN1Q86WV5 123 aa10.02□□□□□ -0.8
SGCE-206ENST00000445866 K7ERU9 68 aa10.02□□□□□ -0.81
SGCE-206ENST00000445866 A0A1W2PNM2 257 aa10.01□□□□□ -0.81
SGCE-206ENST00000445866 CCKP06307 115 aa10.01□□□□□ -0.81
SGCE-206ENST00000445866 VPS25Q9BRG1 176 aa10.01□□□□□ -0.81
SGCE-206ENST00000445866 PDE6GP18545 87 aa10□□□□□ -0.81
SGCE-206ENST00000445866 ETDBQ3ZM63 59 aa9.99□□□□□ -0.81
SGCE-206ENST00000445866 LOC110117498A0A087WWA1 95 aa9.99□□□□□ -0.81
SGCE-206ENST00000445866 Q6Q795 121 aa9.99□□□□□ -0.81
SGCE-206ENST00000445866 TRBV7-7A0A0K0K1E9 115 aa9.98□□□□□ -0.81
SGCE-206ENST00000445866 Q6ZQT0 140 aa9.98□□□□□ -0.81
SGCE-206ENST00000445866 RPS29P62273 56 aaKnown RBP9.96□□□□□ -0.81
SGCE-206ENST00000445866 LIMD2Q9BT23 127 aa9.96□□□□□ -0.82
SGCE-206ENST00000445866 A0A087WSZ3 146 aa9.94□□□□□ -0.82
SGCE-206ENST00000445866 Q5XG85 94 aa9.92□□□□□ -0.82
SGCE-206ENST00000445866 HERC1Q15751 4861 aa9.9□□□□□ -0.82
SGCE-206ENST00000445866 C21orf62-AS1Q17RA5 79 aa9.9□□□□□ -0.82
SGCE-206ENST00000445866 RETNLBQ9BQ08 111 aa9.9□□□□□ -0.82
SGCE-206ENST00000445866 SS18L2Q9UHA2 77 aa9.89□□□□□ -0.83
SGCE-206ENST00000445866 A0A1B0GW54 56 aa9.87□□□□□ -0.83
SGCE-206ENST00000445866 J3QR89 54 aa9.85□□□□□ -0.83
SGCE-206ENST00000445866 C1orf195Q5TG92 126 aa9.85□□□□□ -0.83
SGCE-206ENST00000445866 PRR4Q16378 134 aa9.84□□□□□ -0.83
SGCE-206ENST00000445866 ASB16-AS1Q495Z4 193 aa9.84□□□□□ -0.83
SGCE-206ENST00000445866 PCP4P48539 62 aa9.83□□□□□ -0.84
SGCE-206ENST00000445866 NREPQ16612 68 aa9.8□□□□□ -0.84
SGCE-206ENST00000445866 IGLV7-46A0A075B6I9 117 aa9.78□□□□□ -0.84
SGCE-206ENST00000445866 DEFB116Q30KQ4 102 aa9.77□□□□□ -0.84
SGCE-206ENST00000445866 FP248Q71RG6 208 aaPredicted RBP9.77□□□□□ -0.84
SGCE-206ENST00000445866 LINC00472Q9H8W2 130 aa9.77□□□□□ -0.85
SGCE-206ENST00000445866 Q96NJ1 140 aa9.76□□□□□ -0.85
SGCE-206ENST00000445866 LINC00846Q9NV44 126 aa9.74□□□□□ -0.85
SGCE-206ENST00000445866 IGKV4-1P06312 121 aa9.74□□□□□ -0.85
SGCE-206ENST00000445866 UBL5Q9BZL1 73 aa9.71□□□□□ -0.85
SGCE-206ENST00000445866 ACYP1P07311 99 aa9.71□□□□□ -0.86
SGCE-206ENST00000445866 Q6ZVQ6 151 aa9.7□□□□□ -0.86
SGCE-206ENST00000445866 SIGMAR1Q99720 223 aa9.7□□□□□ -0.86
SGCE-206ENST00000445866 J3KT08 172 aa9.68□□□□□ -0.86
SGCE-206ENST00000445866 SCGB1A1P11684 91 aa9.68□□□□□ -0.86
SGCE-206ENST00000445866 HMCN2Q8NDA2 5059 aa9.67□□□□□ -0.86
SGCE-206ENST00000445866 FAM240AA0A1B0GVK7 77 aa9.66□□□□□ -0.86
SGCE-206ENST00000445866 BPY2O14599 106 aa9.64□□□□□ -0.87
SGCE-206ENST00000445866 C9orf92A6NGG3 77 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms