RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 MDFIQ99750 246 aa13.58□□□□□ -0.24
SKIDA1-201ENST00000444772 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.57□□□□□ -0.24
SKIDA1-201ENST00000444772 HUWE1Q7Z6Z7 4374 aaKnown RBP13.57□□□□□ -0.24
SKIDA1-201ENST00000444772 UBE2DNLQ8IWF7 75 aa13.57□□□□□ -0.24
SKIDA1-201ENST00000444772 NBEAL1Q6ZS30 2694 aa13.57□□□□□ -0.24
SKIDA1-201ENST00000444772 A0A0G2JQZ4 141 aa13.57□□□□□ -0.24
SKIDA1-201ENST00000444772 MGAM2Q2M2H8 2515 aa13.55□□□□□ -0.24
SKIDA1-201ENST00000444772 FAM229BQ4G0N7 80 aa13.53□□□□□ -0.24
SKIDA1-201ENST00000444772 LINC00336Q6ZUF6 198 aa13.53□□□□□ -0.24
SKIDA1-201ENST00000444772 APLNQ9ULZ1 77 aa13.53□□□□□ -0.24
SKIDA1-201ENST00000444772 PRO0628Q9UI54 55 aa13.52□□□□□ -0.24
SKIDA1-201ENST00000444772 PHF5AQ7RTV0 110 aaKnown RBP13.52□□□□□ -0.25
SKIDA1-201ENST00000444772 NDUFB1O75438 58 aa13.51□□□□□ -0.25
SKIDA1-201ENST00000444772 DEFB116Q30KQ4 102 aa13.5□□□□□ -0.25
SKIDA1-201ENST00000444772 hDV103S1A0JD37 113 aa13.49□□□□□ -0.25
SKIDA1-201ENST00000444772 C9orf163Q8N9P6 203 aa13.49□□□□□ -0.25
SKIDA1-201ENST00000444772 MP68P56378 58 aa13.48□□□□□ -0.25
SKIDA1-201ENST00000444772 CHTF8P0CG12 524 aa13.47□□□□□ -0.25
SKIDA1-201ENST00000444772 KRTAP11-1Q8IUC1 163 aa13.47□□□□□ -0.25
SKIDA1-201ENST00000444772 WFDC13Q8IUB5 93 aa13.47□□□□□ -0.25
SKIDA1-201ENST00000444772 KRTAP29-1A8MX34 341 aaPredicted RBP13.47□□□□□ -0.25
SKIDA1-201ENST00000444772 B9D2Q9BPU9 175 aa13.47□□□□□ -0.25
SKIDA1-201ENST00000444772 CYP4F30PQ9H0H9 118 aa13.46□□□□□ -0.26
SKIDA1-201ENST00000444772 PRR15Q8IV56 129 aa13.45□□□□□ -0.26
SKIDA1-201ENST00000444772 MPLKIPQ8TAP9 179 aa13.44□□□□□ -0.26
SKIDA1-201ENST00000444772 A8MWP4 228 aa13.43□□□□□ -0.26
SKIDA1-201ENST00000444772 C1orf64Q8NEQ6 169 aa13.42□□□□□ -0.26
SKIDA1-201ENST00000444772 LINC00472Q9H8W2 130 aa13.42□□□□□ -0.26
SKIDA1-201ENST00000444772 LRCOL1A6NCL2 159 aa13.42□□□□□ -0.26
SKIDA1-201ENST00000444772 H3BPC8 53 aa13.41□□□□□ -0.26
SKIDA1-201ENST00000444772 RPL37AP61513 92 aaKnown RBP13.41□□□□□ -0.26
SKIDA1-201ENST00000444772 CASC2Q6XLA1 102 aa13.41□□□□□ -0.26
SKIDA1-201ENST00000444772 TRAV22A0A0B4J277 110 aa13.37□□□□□ -0.27
SKIDA1-201ENST00000444772 NBDYA0A0U1RRE5 68 aa13.36□□□□□ -0.27
SKIDA1-201ENST00000444772 KRTAP13-1Q8IUC0 172 aa13.36□□□□□ -0.27
SKIDA1-201ENST00000444772 DNAH10Q8IVF4 4471 aa13.36□□□□□ -0.27
SKIDA1-201ENST00000444772 Q1T7F1 81 aa13.34□□□□□ -0.27
SKIDA1-201ENST00000444772 LINC00208Q96KT6 92 aa13.34□□□□□ -0.27
SKIDA1-201ENST00000444772 STAB2Q8WWQ8 2551 aa13.32□□□□□ -0.28
SKIDA1-201ENST00000444772 H0Y9P7 68 aa13.32□□□□□ -0.28
SKIDA1-201ENST00000444772 SPANXA2-OT1Q8N9U9 137 aa13.31□□□□□ -0.28
SKIDA1-201ENST00000444772 Q6ZRN7 208 aaPredicted RBP13.31□□□□□ -0.28
SKIDA1-201ENST00000444772 DNAH9Q9NYC9 4486 aa13.29□□□□□ -0.28
SKIDA1-201ENST00000444772 BRK1Q8WUW1 75 aa13.29□□□□□ -0.28
SKIDA1-201ENST00000444772 NUPR2A6NF83 97 aa13.29□□□□□ -0.28
SKIDA1-201ENST00000444772 LYSTQ99698 3801 aa13.27□□□□□ -0.28
SKIDA1-201ENST00000444772 DYNC2H1Q8NCM8 4307 aaKnown RBP13.26□□□□□ -0.29
SKIDA1-201ENST00000444772 PANO1I0J062 215 aa13.26□□□□□ -0.29
SKIDA1-201ENST00000444772 SPACA4Q8TDM5 124 aa13.26□□□□□ -0.29
SKIDA1-201ENST00000444772 PRR4Q16378 134 aa13.25□□□□□ -0.29
SKIDA1-201ENST00000444772 MMP24-AS1A0A0U1RRL7 71 aa13.24□□□□□ -0.29
SKIDA1-201ENST00000444772 DNHD1Q96M86 4753 aa13.24□□□□□ -0.29
SKIDA1-201ENST00000444772 COL7A1Q02388 2944 aa13.23□□□□□ -0.29
SKIDA1-201ENST00000444772 LINC00483Q53H64 154 aa13.22□□□□□ -0.29
SKIDA1-201ENST00000444772 V9GYY9 64 aa13.21□□□□□ -0.3
SKIDA1-201ENST00000444772 ZNF706Q9Y5V0 76 aaPredicted RBP13.2□□□□□ -0.3
SKIDA1-201ENST00000444772 SRRM2Q9UQ35 2752 aaKnown RBP13.19□□□□□ -0.3
SKIDA1-201ENST00000444772 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.19□□□□□ -0.3
SKIDA1-201ENST00000444772 MOBPQ13875 183 aa13.17□□□□□ -0.3
SKIDA1-201ENST00000444772 IGLV9-49A0A0B4J1Y8 123 aa13.17□□□□□ -0.3
SKIDA1-201ENST00000444772 Q96NJ1 140 aa13.17□□□□□ -0.3
SKIDA1-201ENST00000444772 TP53AIP1Q9HCN2 124 aa13.17□□□□□ -0.3
SKIDA1-201ENST00000444772 ASB16-AS1Q495Z4 193 aa13.16□□□□□ -0.3
SKIDA1-201ENST00000444772 A0A087WTM6 91 aa13.12□□□□□ -0.31
SKIDA1-201ENST00000444772 C8orf17Q9NRJ1 99 aa13.09□□□□□ -0.31
SKIDA1-201ENST00000444772 DNAH7Q8WXX0 4024 aa13.09□□□□□ -0.31
SKIDA1-201ENST00000444772 WWC2-AS2Q96NR7 200 aa13.08□□□□□ -0.31
SKIDA1-201ENST00000444772 IGLV5-52A0A0A0MRZ9 124 aa13.07□□□□□ -0.32
SKIDA1-201ENST00000444772 CSMD3Q7Z407 3707 aa13.06□□□□□ -0.32
SKIDA1-201ENST00000444772 TENM2Q9NT68 2774 aa13.06□□□□□ -0.32
SKIDA1-201ENST00000444772 IGLV7-46A0A075B6I9 117 aa13.06□□□□□ -0.32
SKIDA1-201ENST00000444772 PSPHP1O15172 72 aa13.06□□□□□ -0.32
SKIDA1-201ENST00000444772 A0A1B0GVX0 72 aa13.05□□□□□ -0.32
SKIDA1-201ENST00000444772 C1orf195Q5TG92 126 aa13.05□□□□□ -0.32
SKIDA1-201ENST00000444772 PSORS1C2Q9UIG4 136 aa13.05□□□□□ -0.32
SKIDA1-201ENST00000444772 RTL8CO15255 209 aa13.04□□□□□ -0.32
SKIDA1-201ENST00000444772 Q6ZR54 194 aa13.04□□□□□ -0.32
SKIDA1-201ENST00000444772 PLAC8Q9NZF1 115 aa13.04□□□□□ -0.32
SKIDA1-201ENST00000444772 ZNF861PO60384 105 aa13.03□□□□□ -0.32
SKIDA1-201ENST00000444772 CDK2AP2O75956 126 aa13.03□□□□□ -0.32
SKIDA1-201ENST00000444772 PLECQ15149 4684 aaKnown RBP13.03□□□□□ -0.32
SKIDA1-201ENST00000444772 LIMD2Q9BT23 127 aa13.02□□□□□ -0.33
SKIDA1-201ENST00000444772 PRKDCP78527 4128 aaKnown RBP13□□□□□ -0.33
SKIDA1-201ENST00000444772 IGHV6-1A0A0B4J1U7 121 aa12.99□□□□□ -0.33
SKIDA1-201ENST00000444772 Q8N9P0 234 aaPredicted RBP12.98□□□□□ -0.33
SKIDA1-201ENST00000444772 A8MUN3 132 aa12.97□□□□□ -0.33
SKIDA1-201ENST00000444772 MRPL34Q9BQ48 92 aaKnown RBP12.96□□□□□ -0.33
SKIDA1-201ENST00000444772 MEGF8Q7Z7M0 2845 aa12.96□□□□□ -0.34
SKIDA1-201ENST00000444772 COA5Q86WW8 74 aa12.95□□□□□ -0.34
SKIDA1-201ENST00000444772 NDUFS5O43920 106 aa12.93□□□□□ -0.34
SKIDA1-201ENST00000444772 Q5VV11 94 aa12.93□□□□□ -0.34
SKIDA1-201ENST00000444772 VPS13DQ5THJ4 4388 aa12.92□□□□□ -0.34
SKIDA1-201ENST00000444772 CD164Q04900 197 aa12.92□□□□□ -0.34
SKIDA1-201ENST00000444772 PCOTHQ58A44 107 aa12.92□□□□□ -0.34
SKIDA1-201ENST00000444772 ANAPC11Q9NYG5 84 aa12.89□□□□□ -0.35
SKIDA1-201ENST00000444772 IGLV7-43P04211 117 aa12.85□□□□□ -0.35
SKIDA1-201ENST00000444772 HECTD4Q9Y4D8 3996 aa12.85□□□□□ -0.35
SKIDA1-201ENST00000444772 PRR15LQ9BU68 103 aa12.84□□□□□ -0.35
SKIDA1-201ENST00000444772 LOC101927531A0A1B0GV80 90 aa12.83□□□□□ -0.36
SKIDA1-201ENST00000444772 KRTAP21-3Q3LHN1 58 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms