RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 SCGB3A1Q96QR1 104 aa4.95□□□□□ -1.62
HDAC8-215ENST00000444609 SND1-IT1Q9HBX3 110 aa4.95□□□□□ -1.62
HDAC8-215ENST00000444609 PAPPA-AS1Q5QFB9 102 aa4.94□□□□□ -1.62
HDAC8-215ENST00000444609 C1orf195Q5TG92 126 aa4.94□□□□□ -1.62
HDAC8-215ENST00000444609 ERASQ7Z444 233 aa4.94□□□□□ -1.62
HDAC8-215ENST00000444609 CST9LQ9H4G1 147 aa4.94□□□□□ -1.62
HDAC8-215ENST00000444609 H3BRM9 83 aa4.93□□□□□ -1.62
HDAC8-215ENST00000444609 TAX1BP3O14907 124 aa4.93□□□□□ -1.62
HDAC8-215ENST00000444609 NMUP48645 174 aa4.93□□□□□ -1.62
HDAC8-215ENST00000444609 TAL2Q16559 108 aa4.93□□□□□ -1.62
HDAC8-215ENST00000444609 C2orf66Q6UXQ4 117 aa4.93□□□□□ -1.62
HDAC8-215ENST00000444609 SPANXCQ9NY87 97 aa4.93□□□□□ -1.62
HDAC8-215ENST00000444609 CYSLTR1Q9Y271 337 aa4.93□□□□□ -1.62
HDAC8-215ENST00000444609 ETDCA0A1B0GVM5 59 aa4.92□□□□□ -1.62
HDAC8-215ENST00000444609 PRYO14603 147 aa4.92□□□□□ -1.62
HDAC8-215ENST00000444609 HERVK_113P63121 156 aa4.92□□□□□ -1.62
HDAC8-215ENST00000444609 Q75L30 129 aa4.92□□□□□ -1.62
HDAC8-215ENST00000444609 Q8N9P0 234 aaPredicted RBP4.92□□□□□ -1.62
HDAC8-215ENST00000444609 COX7B2Q8TF08 81 aa4.92□□□□□ -1.62
HDAC8-215ENST00000444609 AMELXQ99217 191 aa4.92□□□□□ -1.62
HDAC8-215ENST00000444609 SIGMAR1Q99720 223 aa4.92□□□□□ -1.62
HDAC8-215ENST00000444609 FAM236DA0A1B0GTK5 79 aa4.91□□□□□ -1.62
HDAC8-215ENST00000444609 FAM236CP0DP71 79 aa4.91□□□□□ -1.62
HDAC8-215ENST00000444609 PFN2P35080 140 aa4.91□□□□□ -1.62
HDAC8-215ENST00000444609 PCP2Q8IVA1 136 aa4.91□□□□□ -1.62
HDAC8-215ENST00000444609 C9orf118A6NHY6 69 aa4.9□□□□□ -1.63
HDAC8-215ENST00000444609 IGIPA6NJ69 53 aa4.9□□□□□ -1.63
HDAC8-215ENST00000444609 SMIM1B2RUZ4 78 aa4.9□□□□□ -1.63
HDAC8-215ENST00000444609 E9PLD3 99 aa4.9□□□□□ -1.63
HDAC8-215ENST00000444609 HERVK_113P61574 105 aa4.9□□□□□ -1.63
HDAC8-215ENST00000444609 PMVKQ15126 192 aa4.9□□□□□ -1.63
HDAC8-215ENST00000444609 KCNQ1DNQ9H478 68 aa4.9□□□□□ -1.63
HDAC8-215ENST00000444609 SMIM13P0DJ93 91 aa4.89□□□□□ -1.63
HDAC8-215ENST00000444609 Q5XG85 94 aa4.89□□□□□ -1.63
HDAC8-215ENST00000444609 CEND1Q8N111 149 aa4.89□□□□□ -1.63
HDAC8-215ENST00000444609 MYMXA0A1B0GTQ4 84 aa4.88□□□□□ -1.63
HDAC8-215ENST00000444609 C11orf86A6NJI1 115 aa4.88□□□□□ -1.63
HDAC8-215ENST00000444609 B5MCH6 92 aa4.88□□□□□ -1.63
HDAC8-215ENST00000444609 GTF2H5Q6ZYL4 71 aa4.88□□□□□ -1.63
HDAC8-215ENST00000444609 J3QR89 54 aa4.87□□□□□ -1.63
HDAC8-215ENST00000444609 SEC61GP60059 68 aa4.87□□□□□ -1.63
HDAC8-215ENST00000444609 Q6ZVH6 145 aa4.87□□□□□ -1.63
HDAC8-215ENST00000444609 Q9BRP9 147 aa4.87□□□□□ -1.63
HDAC8-215ENST00000444609 H7C2G1 150 aa4.86□□□□□ -1.63
HDAC8-215ENST00000444609 CD164Q04900 197 aa4.86□□□□□ -1.63
HDAC8-215ENST00000444609 SMIM29Q86T20 159 aa4.86□□□□□ -1.63
HDAC8-215ENST00000444609 FXYD2P54710 66 aa4.85□□□□□ -1.63
HDAC8-215ENST00000444609 HIST1H4GQ99525 98 aa4.85□□□□□ -1.63
HDAC8-215ENST00000444609 TTTY13Q9BZ97 58 aa4.85□□□□□ -1.63
HDAC8-215ENST00000444609 A0A1B0GWB2 263 aa4.84□□□□□ -1.63
HDAC8-215ENST00000444609 A0A1W2PPM0 123 aa4.84□□□□□ -1.63
HDAC8-215ENST00000444609 ZNF815PA8K554 130 aa4.84□□□□□ -1.63
HDAC8-215ENST00000444609 H3BUT2 72 aa4.84□□□□□ -1.63
HDAC8-215ENST00000444609 K7EP34 96 aa4.84□□□□□ -1.63
HDAC8-215ENST00000444609 LEPROTO15243 131 aa4.84□□□□□ -1.63
HDAC8-215ENST00000444609 FABP2P12104 132 aa4.84□□□□□ -1.63
HDAC8-215ENST00000444609 Q1RN00 199 aa4.84□□□□□ -1.63
HDAC8-215ENST00000444609 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.63
HDAC8-215ENST00000444609 SPANXB1Q9NS25 103 aaPredicted RBP4.84□□□□□ -1.63
HDAC8-215ENST00000444609 ERG28Q9UKR5 140 aa4.84□□□□□ -1.63
HDAC8-215ENST00000444609 A0A0G2JQZ4 141 aa4.83□□□□□ -1.64
HDAC8-215ENST00000444609 TMEM223A0PJW6 202 aa4.83□□□□□ -1.64
HDAC8-215ENST00000444609 COX17Q14061 63 aa4.83□□□□□ -1.64
HDAC8-215ENST00000444609 TMEM170BQ5T4T1 132 aa4.83□□□□□ -1.64
HDAC8-215ENST00000444609 SCGB1D4Q6XE38 83 aa4.83□□□□□ -1.64
HDAC8-215ENST00000444609 SMIM20Q8N5G0 67 aa4.83□□□□□ -1.64
HDAC8-215ENST00000444609 NHP2Q9NX24 153 aaKnown RBP4.83□□□□□ -1.64
HDAC8-215ENST00000444609 J3QQQ9 107 aa4.82□□□□□ -1.64
HDAC8-215ENST00000444609 LCE1AQ5T7P2 110 aa4.82□□□□□ -1.64
HDAC8-215ENST00000444609 MPLKIPQ8TAP9 179 aa4.82□□□□□ -1.64
HDAC8-215ENST00000444609 RAB37Q96AX2 223 aa4.82□□□□□ -1.64
HDAC8-215ENST00000444609 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
HDAC8-215ENST00000444609 SPCS1Q9Y6A9 102 aa4.82□□□□□ -1.64
HDAC8-215ENST00000444609 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
HDAC8-215ENST00000444609 TINCRA0A1B0GVN0 87 aa4.81□□□□□ -1.64
HDAC8-215ENST00000444609 ZNF22P17026 224 aaPredicted RBP4.81□□□□□ -1.64
HDAC8-215ENST00000444609 ST20-AS1Q8NBB2 130 aa4.81□□□□□ -1.64
HDAC8-215ENST00000444609 OR13C6PQ8NH95 151 aa4.81□□□□□ -1.64
HDAC8-215ENST00000444609 IGLV5-45A0A087WSX0 123 aa4.8□□□□□ -1.64
HDAC8-215ENST00000444609 A8MWP4 228 aa4.8□□□□□ -1.64
HDAC8-215ENST00000444609 SPINK8P0C7L1 97 aa4.8□□□□□ -1.64
HDAC8-215ENST00000444609 SPRR2DP22532 72 aa4.8□□□□□ -1.64
HDAC8-215ENST00000444609 LYRM7Q5U5X0 104 aa4.8□□□□□ -1.64
HDAC8-215ENST00000444609 Q6ZRX8 168 aa4.8□□□□□ -1.64
HDAC8-215ENST00000444609 OBSCN-AS1Q96MR7 158 aa4.8□□□□□ -1.64
HDAC8-215ENST00000444609 SS18L2Q9UHA2 77 aa4.8□□□□□ -1.64
HDAC8-215ENST00000444609 LOC107984156A0A0G2JMH3 177 aa4.79□□□□□ -1.64
HDAC8-215ENST00000444609 ARL17AQ8IVW1 177 aa4.79□□□□□ -1.64
HDAC8-215ENST00000444609 RBM12B-AS1Q9P1G2 102 aa4.79□□□□□ -1.64
HDAC8-215ENST00000444609 TRBV10-3A0A0K0K1G6 114 aa4.78□□□□□ -1.64
HDAC8-215ENST00000444609 F8W1H4 67 aa4.78□□□□□ -1.64
HDAC8-215ENST00000444609 KRTAP10-5P60370 271 aa4.78□□□□□ -1.64
HDAC8-215ENST00000444609 K7ERJ3 54 aa4.77□□□□□ -1.65
HDAC8-215ENST00000444609 SPRR1BP22528 89 aa4.77□□□□□ -1.65
HDAC8-215ENST00000444609 TSPEAR-AS2P59090 65 aa4.77□□□□□ -1.65
HDAC8-215ENST00000444609 NAA38Q9BRA0 125 aaKnown RBP4.77□□□□□ -1.65
HDAC8-215ENST00000444609 SPANXDQ9BXN6 97 aa4.77□□□□□ -1.65
HDAC8-215ENST00000444609 A0A0B4J2C4 111 aa4.76□□□□□ -1.65
HDAC8-215ENST00000444609 NCR3O14931 201 aa4.76□□□□□ -1.65
HDAC8-215ENST00000444609 TIMM17BO60830 172 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms