RNA–Protein interactions for RNA: ENST00000444268.1

COL28A1-204, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 1,755 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-204ENST00000444268 DNAH6Q9C0G6 4158 aa8.02□□□□□ -1.13
COL28A1-204ENST00000444268 IGLV8-61A0A075B6I0 122 aa8.02□□□□□ -1.13
COL28A1-204ENST00000444268 PHF5AQ7RTV0 110 aaKnown RBP8.02□□□□□ -1.13
COL28A1-204ENST00000444268 DNAH2Q9P225 4427 aa8.01□□□□□ -1.13
COL28A1-204ENST00000444268 LCE6AA0A183 80 aa7.99□□□□□ -1.13
COL28A1-204ENST00000444268 SPRR1BP22528 89 aa7.99□□□□□ -1.13
COL28A1-204ENST00000444268 UBE2AP49459 152 aa7.99□□□□□ -1.13
COL28A1-204ENST00000444268 TMEM258P61165 79 aa7.99□□□□□ -1.13
COL28A1-204ENST00000444268 A0A087WTM6 91 aa7.99□□□□□ -1.13
COL28A1-204ENST00000444268 EPM2AB3EWF7 344 aa7.99□□□□□ -1.13
COL28A1-204ENST00000444268 IGKV4-1P06312 121 aa7.99□□□□□ -1.13
COL28A1-204ENST00000444268 C1orf134Q5TEV5 83 aa7.99□□□□□ -1.13
COL28A1-204ENST00000444268 SACSQ9NZJ4 4579 aa7.99□□□□□ -1.13
COL28A1-204ENST00000444268 SPACA4Q8TDM5 124 aa7.98□□□□□ -1.13
COL28A1-204ENST00000444268 DPH3Q96FX2 82 aa7.97□□□□□ -1.13
COL28A1-204ENST00000444268 IGFL1Q6UW32 110 aa7.96□□□□□ -1.14
COL28A1-204ENST00000444268 RTL8CO15255 209 aa7.95□□□□□ -1.14
COL28A1-204ENST00000444268 KRTAP11-1Q8IUC1 163 aa7.94□□□□□ -1.14
COL28A1-204ENST00000444268 C20orf197Q8N268 126 aa7.94□□□□□ -1.14
COL28A1-204ENST00000444268 KMT2CQ8NEZ4 4911 aaKnown RBP7.93□□□□□ -1.14
COL28A1-204ENST00000444268 KLKP1Q107X0 134 aa7.92□□□□□ -1.14
COL28A1-204ENST00000444268 KRTAP13-1Q8IUC0 172 aa7.92□□□□□ -1.14
COL28A1-204ENST00000444268 Q8N9L7 120 aa7.92□□□□□ -1.14
COL28A1-204ENST00000444268 FRAS1Q86XX4 4008 aa7.92□□□□□ -1.14
COL28A1-204ENST00000444268 DNAH17Q9UFH2 4485 aa7.91□□□□□ -1.14
COL28A1-204ENST00000444268 PANO1I0J062 215 aa7.91□□□□□ -1.14
COL28A1-204ENST00000444268 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.91□□□□□ -1.14
COL28A1-204ENST00000444268 NDUFC1O43677 76 aa7.9□□□□□ -1.14
COL28A1-204ENST00000444268 CYSTM1Q9H1C7 97 aa7.9□□□□□ -1.14
COL28A1-204ENST00000444268 ZNF706Q9Y5V0 76 aaPredicted RBP7.89□□□□□ -1.15
COL28A1-204ENST00000444268 RYR2Q92736 4967 aa7.89□□□□□ -1.15
COL28A1-204ENST00000444268 RPS28P62857 69 aaKnown RBP7.89□□□□□ -1.15
COL28A1-204ENST00000444268 J3KT08 172 aa7.88□□□□□ -1.15
COL28A1-204ENST00000444268 DSCR10P59022 87 aa7.88□□□□□ -1.15
COL28A1-204ENST00000444268 A0A087WSZ3 146 aa7.87□□□□□ -1.15
COL28A1-204ENST00000444268 OCR1Q9BZK8 76 aa7.87□□□□□ -1.15
COL28A1-204ENST00000444268 PLAC8Q9NZF1 115 aa7.87□□□□□ -1.15
COL28A1-204ENST00000444268 IGLV5-52A0A0A0MRZ9 124 aa7.87□□□□□ -1.15
COL28A1-204ENST00000444268 RPL37AP61513 92 aaKnown RBP7.87□□□□□ -1.15
COL28A1-204ENST00000444268 FAT2Q9NYQ8 4349 aa7.86□□□□□ -1.15
COL28A1-204ENST00000444268 K7EQZ3 153 aa7.84□□□□□ -1.15
COL28A1-204ENST00000444268 KRTAP10-2P60368 255 aa7.84□□□□□ -1.15
COL28A1-204ENST00000444268 TMEM254Q8TBM7 123 aa7.84□□□□□ -1.15
COL28A1-204ENST00000444268 H7BZZ5 65 aa7.84□□□□□ -1.15
COL28A1-204ENST00000444268 LINC00483Q53H64 154 aa7.84□□□□□ -1.15
COL28A1-204ENST00000444268 HCG22E2RYF7 251 aa7.83□□□□□ -1.16
COL28A1-204ENST00000444268 FAM236DA0A1B0GTK5 79 aa7.82□□□□□ -1.16
COL28A1-204ENST00000444268 FAM236CP0DP71 79 aa7.82□□□□□ -1.16
COL28A1-204ENST00000444268 DNAH11Q96DT5 4516 aa7.82□□□□□ -1.16
COL28A1-204ENST00000444268 A0A0G2JQZ4 141 aa7.82□□□□□ -1.16
COL28A1-204ENST00000444268 HECTD4Q9Y4D8 3996 aa7.81□□□□□ -1.16
COL28A1-204ENST00000444268 ATP5EP56381 51 aaPredicted RBP7.81□□□□□ -1.16
COL28A1-204ENST00000444268 PSORS1C2Q9UIG4 136 aa7.81□□□□□ -1.16
COL28A1-204ENST00000444268 SNURFQ9Y675 71 aa7.81□□□□□ -1.16
COL28A1-204ENST00000444268 ZNF861PO60384 105 aa7.79□□□□□ -1.16
COL28A1-204ENST00000444268 RYR3Q15413 4870 aa7.79□□□□□ -1.16
COL28A1-204ENST00000444268 PKD1P98161 4303 aa7.79□□□□□ -1.16
COL28A1-204ENST00000444268 A0A0U1RQV1 116 aa7.78□□□□□ -1.16
COL28A1-204ENST00000444268 A8MWP4 228 aa7.77□□□□□ -1.17
COL28A1-204ENST00000444268 LINC00472Q9H8W2 130 aa7.77□□□□□ -1.17
COL28A1-204ENST00000444268 DNAH5Q8TE73 4624 aa7.76□□□□□ -1.17
COL28A1-204ENST00000444268 IGLV9-49A0A0B4J1Y8 123 aa7.76□□□□□ -1.17
COL28A1-204ENST00000444268 C5orf47Q569G3 176 aa7.76□□□□□ -1.17
COL28A1-204ENST00000444268 LINC00336Q6ZUF6 198 aa7.76□□□□□ -1.17
COL28A1-204ENST00000444268 FAM30AQ9NZY2 134 aa7.76□□□□□ -1.17
COL28A1-204ENST00000444268 SRRM2Q9UQ35 2752 aaKnown RBP7.75□□□□□ -1.17
COL28A1-204ENST00000444268 PRR15Q8IV56 129 aa7.75□□□□□ -1.17
COL28A1-204ENST00000444268 A0A1B0GVY2 172 aa7.74□□□□□ -1.17
COL28A1-204ENST00000444268 DEFB116Q30KQ4 102 aa7.74□□□□□ -1.17
COL28A1-204ENST00000444268 NDUFB1O75438 58 aa7.74□□□□□ -1.17
COL28A1-204ENST00000444268 SERP1Q9Y6X1 66 aa7.74□□□□□ -1.17
COL28A1-204ENST00000444268 KRTAP10-1P60331 282 aa7.72□□□□□ -1.17
COL28A1-204ENST00000444268 IGLV7-43P04211 117 aa7.71□□□□□ -1.17
COL28A1-204ENST00000444268 CASC2Q6XLA1 102 aa7.71□□□□□ -1.18
COL28A1-204ENST00000444268 KRTAP29-1A8MX34 341 aaPredicted RBP7.7□□□□□ -1.18
COL28A1-204ENST00000444268 WFDC13Q8IUB5 93 aa7.7□□□□□ -1.18
COL28A1-204ENST00000444268 PKHD1P08F94 4074 aa7.69□□□□□ -1.18
COL28A1-204ENST00000444268 MOBPQ13875 183 aa7.69□□□□□ -1.18
COL28A1-204ENST00000444268 MP68P56378 58 aa7.68□□□□□ -1.18
COL28A1-204ENST00000444268 H3BPC8 53 aa7.66□□□□□ -1.18
COL28A1-204ENST00000444268 CIRBP-AS1Q8TBR5 109 aa7.66□□□□□ -1.18
COL28A1-204ENST00000444268 ZCCHC13Q8WW36 166 aaKnown RBP7.66□□□□□ -1.18
COL28A1-204ENST00000444268 Q6ZSA8 131 aa7.65□□□□□ -1.18
COL28A1-204ENST00000444268 CDK2AP2O75956 126 aa7.64□□□□□ -1.19
COL28A1-204ENST00000444268 CD164Q04900 197 aa7.64□□□□□ -1.19
COL28A1-204ENST00000444268 Q96NJ1 140 aa7.64□□□□□ -1.19
COL28A1-204ENST00000444268 DNAH8Q96JB1 4490 aa7.64□□□□□ -1.19
COL28A1-204ENST00000444268 MMP24-AS1A0A0U1RRL7 71 aa7.63□□□□□ -1.19
COL28A1-204ENST00000444268 OXTP01178 125 aa7.63□□□□□ -1.19
COL28A1-204ENST00000444268 SSBP3-AS1Q7Z2R9 100 aa7.63□□□□□ -1.19
COL28A1-204ENST00000444268 hDV103S1A0JD37 113 aa7.62□□□□□ -1.19
COL28A1-204ENST00000444268 HRCT1Q6UXD1 115 aa7.62□□□□□ -1.19
COL28A1-204ENST00000444268 LRP1BQ9NZR2 4599 aa7.62□□□□□ -1.19
COL28A1-204ENST00000444268 DYNC1H1Q14204 4646 aaKnown RBP7.62□□□□□ -1.19
COL28A1-204ENST00000444268 TP53AIP1Q9HCN2 124 aa7.61□□□□□ -1.19
COL28A1-204ENST00000444268 A0A1B0GVX0 72 aa7.6□□□□□ -1.19
COL28A1-204ENST00000444268 ANAPC11Q9NYG5 84 aa7.6□□□□□ -1.19
COL28A1-204ENST00000444268 SMIM26A0A096LP01 95 aa7.59□□□□□ -1.19
COL28A1-204ENST00000444268 H0Y9P7 68 aa7.59□□□□□ -1.2
COL28A1-204ENST00000444268 ASB16-AS1Q495Z4 193 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms