RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 C16orf90A8MZG2 172 aa5.17□□□□□ -1.58
CCDC39-201ENST00000442201 Q5VV11 94 aa5.17□□□□□ -1.58
CCDC39-201ENST00000442201 NKAPP1Q8N9T2 125 aa5.17□□□□□ -1.58
CCDC39-201ENST00000442201 PLA2G2DQ9UNK4 145 aa5.17□□□□□ -1.58
CCDC39-201ENST00000442201 A0A096LNI7 61 aa5.17□□□□□ -1.58
CCDC39-201ENST00000442201 IGKV2-24A0A0C4DH68 120 aa5.17□□□□□ -1.58
CCDC39-201ENST00000442201 A8MU10 97 aa5.17□□□□□ -1.58
CCDC39-201ENST00000442201 IGLV6-57P01721 117 aa5.17□□□□□ -1.58
CCDC39-201ENST00000442201 SERTAD4-AS1Q5TG53 156 aa5.17□□□□□ -1.58
CCDC39-201ENST00000442201 DIRC1Q969H9 104 aa5.17□□□□□ -1.58
CCDC39-201ENST00000442201 DNAH10Q8IVF4 4471 aa5.16□□□□□ -1.58
CCDC39-201ENST00000442201 C1orf64Q8NEQ6 169 aa5.16□□□□□ -1.58
CCDC39-201ENST00000442201 CYP4F30PQ9H0H9 118 aa5.16□□□□□ -1.58
CCDC39-201ENST00000442201 UBE2AP49459 152 aa5.16□□□□□ -1.58
CCDC39-201ENST00000442201 LCA10Q71F78 164 aa5.16□□□□□ -1.58
CCDC39-201ENST00000442201 C7orf65Q6ZTY9 151 aa5.15□□□□□ -1.58
CCDC39-201ENST00000442201 PRR26Q8N8Z3 221 aa5.15□□□□□ -1.58
CCDC39-201ENST00000442201 IGLV5-37A0A075B6J1 123 aa5.15□□□□□ -1.58
CCDC39-201ENST00000442201 FAM168BA1KXE4 195 aa5.15□□□□□ -1.58
CCDC39-201ENST00000442201 BPY2O14599 106 aa5.15□□□□□ -1.58
CCDC39-201ENST00000442201 PSPHP1O15172 72 aa5.15□□□□□ -1.58
CCDC39-201ENST00000442201 TNP2Q05952 138 aa5.15□□□□□ -1.58
CCDC39-201ENST00000442201 RTL8CO15255 209 aa5.14□□□□□ -1.59
CCDC39-201ENST00000442201 C6orf99Q4VX62 202 aa5.14□□□□□ -1.59
CCDC39-201ENST00000442201 ALMS1Q8TCU4 4167 aa5.14□□□□□ -1.59
CCDC39-201ENST00000442201 C7orf33Q8WU49 177 aa5.14□□□□□ -1.59
CCDC39-201ENST00000442201 IGLV5-52A0A0A0MRZ9 124 aa5.13□□□□□ -1.59
CCDC39-201ENST00000442201 CHTF8P0CG12 524 aa5.13□□□□□ -1.59
CCDC39-201ENST00000442201 KMT2AQ03164 3969 aa5.13□□□□□ -1.59
CCDC39-201ENST00000442201 A8MUN3 132 aa5.13□□□□□ -1.59
CCDC39-201ENST00000442201 KRTAP7-1Q8IUC3 87 aa5.13□□□□□ -1.59
CCDC39-201ENST00000442201 ZCCHC13Q8WW36 166 aaKnown RBP5.12□□□□□ -1.59
CCDC39-201ENST00000442201 PDE6GP18545 87 aa5.12□□□□□ -1.59
CCDC39-201ENST00000442201 A0A1W2PNN7 141 aa5.12□□□□□ -1.59
CCDC39-201ENST00000442201 HAMPP81172 84 aa5.11□□□□□ -1.59
CCDC39-201ENST00000442201 KCNQ1DNQ9H478 68 aa5.11□□□□□ -1.59
CCDC39-201ENST00000442201 IGLV1-50A0A075B6I6 118 aa5.1□□□□□ -1.59
CCDC39-201ENST00000442201 RPL37AP8A6NKH3 93 aa5.1□□□□□ -1.59
CCDC39-201ENST00000442201 HIGD2AQ9BW72 106 aa5.1□□□□□ -1.59
CCDC39-201ENST00000442201 DNAH2Q9P225 4427 aa5.1□□□□□ -1.59
CCDC39-201ENST00000442201 DNAH6Q9C0G6 4158 aa5.09□□□□□ -1.59
CCDC39-201ENST00000442201 PANO1I0J062 215 aa5.09□□□□□ -1.59
CCDC39-201ENST00000442201 COX7BP24311 80 aa5.09□□□□□ -1.59
CCDC39-201ENST00000442201 SPACA4Q8TDM5 124 aa5.09□□□□□ -1.59
CCDC39-201ENST00000442201 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-201ENST00000442201 HCG22E2RYF7 251 aa5.09□□□□□ -1.59
CCDC39-201ENST00000442201 LINC00575Q6W349 94 aa5.08□□□□□ -1.6
CCDC39-201ENST00000442201 IGKV4-1P06312 121 aa5.08□□□□□ -1.6
CCDC39-201ENST00000442201 ELOF1P60002 83 aaKnown RBP5.08□□□□□ -1.6
CCDC39-201ENST00000442201 KRTAP10-2P60368 255 aa5.08□□□□□ -1.6
CCDC39-201ENST00000442201 Q75L30 129 aa5.08□□□□□ -1.6
CCDC39-201ENST00000442201 LIMD2Q9BT23 127 aa5.08□□□□□ -1.6
CCDC39-201ENST00000442201 ETDCA0A1B0GVM5 59 aa5.07□□□□□ -1.6
CCDC39-201ENST00000442201 H3BQ85 93 aa5.06□□□□□ -1.6
CCDC39-201ENST00000442201 SPRR1AP35321 89 aa5.06□□□□□ -1.6
CCDC39-201ENST00000442201 DNAH17Q9UFH2 4485 aa5.06□□□□□ -1.6
CCDC39-201ENST00000442201 REG3GQ6UW15 175 aa5.06□□□□□ -1.6
CCDC39-201ENST00000442201 LINC00528Q8N1L1 170 aa5.06□□□□□ -1.6
CCDC39-201ENST00000442201 CDC42SE1Q9NRR8 79 aa5.06□□□□□ -1.6
CCDC39-201ENST00000442201 LOC101927531A0A1B0GV80 90 aa5.06□□□□□ -1.6
CCDC39-201ENST00000442201 Q8N9P0 234 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-201ENST00000442201 KRTAP4-16G5E9R7 235 aaPredicted RBP5.05□□□□□ -1.6
CCDC39-201ENST00000442201 Q6ZRX8 168 aa5.05□□□□□ -1.6
CCDC39-201ENST00000442201 PLAC8Q9NZF1 115 aa5.05□□□□□ -1.6
CCDC39-201ENST00000442201 CHKB-CPT1BH3BT56 60 aa5.04□□□□□ -1.6
CCDC39-201ENST00000442201 HYDINQ4G0P3 5121 aa5.04□□□□□ -1.6
CCDC39-201ENST00000442201 SACSQ9NZJ4 4579 aa5.04□□□□□ -1.6
CCDC39-201ENST00000442201 Q6ZQY7 126 aa5.03□□□□□ -1.6
CCDC39-201ENST00000442201 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.03□□□□□ -1.6
CCDC39-201ENST00000442201 SPTSSBQ8NFR3 76 aa5.03□□□□□ -1.6
CCDC39-201ENST00000442201 DHRS4-AS1Q9P1J3 65 aa5.03□□□□□ -1.6
CCDC39-201ENST00000442201 KRTAP11-1Q8IUC1 163 aa5.02□□□□□ -1.61
CCDC39-201ENST00000442201 KRTAP10-1P60331 282 aa5.02□□□□□ -1.61
CCDC39-201ENST00000442201 MOBPQ13875 183 aa5.01□□□□□ -1.61
CCDC39-201ENST00000442201 Q9BRP9 147 aa5.01□□□□□ -1.61
CCDC39-201ENST00000442201 FAM30AQ9NZY2 134 aa5.01□□□□□ -1.61
CCDC39-201ENST00000442201 LINC01554Q52M75 96 aa5.01□□□□□ -1.61
CCDC39-201ENST00000442201 SCXQ7RTU7 201 aa5.01□□□□□ -1.61
CCDC39-201ENST00000442201 PRLHP81277 87 aa5□□□□□ -1.61
CCDC39-201ENST00000442201 Q6ZSA8 131 aa5□□□□□ -1.61
CCDC39-201ENST00000442201 CIRBP-AS1Q8TBR5 109 aa5□□□□□ -1.61
CCDC39-201ENST00000442201 LINC00313P59037 77 aa4.99□□□□□ -1.61
CCDC39-201ENST00000442201 H0Y9J4 135 aa4.99□□□□□ -1.61
CCDC39-201ENST00000442201 FRAS1Q86XX4 4008 aa4.99□□□□□ -1.61
CCDC39-201ENST00000442201 HECTD4Q9Y4D8 3996 aa4.99□□□□□ -1.61
CCDC39-201ENST00000442201 FAT2Q9NYQ8 4349 aa4.99□□□□□ -1.61
CCDC39-201ENST00000442201 NDUFB1O75438 58 aa4.98□□□□□ -1.61
CCDC39-201ENST00000442201 DNAH11Q96DT5 4516 aa4.98□□□□□ -1.61
CCDC39-201ENST00000442201 A0A087X002 238 aa4.98□□□□□ -1.61
CCDC39-201ENST00000442201 A0A1B0GVY2 172 aa4.98□□□□□ -1.61
CCDC39-201ENST00000442201 ASB16-AS1Q495Z4 193 aa4.98□□□□□ -1.61
CCDC39-201ENST00000442201 PRR15LQ9BU68 103 aa4.98□□□□□ -1.61
CCDC39-201ENST00000442201 PSORS1C2Q9UIG4 136 aa4.98□□□□□ -1.61
CCDC39-201ENST00000442201 SPANXA2-OT1Q8N9U9 137 aa4.97□□□□□ -1.61
CCDC39-201ENST00000442201 DEFB105AQ8NG35 78 aa4.97□□□□□ -1.61
CCDC39-201ENST00000442201 KMT2CQ8NEZ4 4911 aaKnown RBP4.96□□□□□ -1.61
CCDC39-201ENST00000442201 RYR2Q92736 4967 aa4.96□□□□□ -1.61
CCDC39-201ENST00000442201 C1orf137Q5JT78 98 aa4.96□□□□□ -1.62
CCDC39-201ENST00000442201 Q8N9L7 120 aa4.96□□□□□ -1.62
CCDC39-201ENST00000442201 ST20-AS1Q8NBB2 130 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms