RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 CDC42SE2Q9NRR3 84 aa3.7□□□□□ -1.82
HDAC9-215ENST00000441986 IGKV2D-30A0A075B6S6 120 aa3.69□□□□□ -1.82
HDAC9-215ENST00000441986 TSPEAR-AS2P59090 65 aa3.69□□□□□ -1.82
HDAC9-215ENST00000441986 MRPS36P82909 103 aaKnown RBP3.69□□□□□ -1.82
HDAC9-215ENST00000441986 ORMDL2Q53FV1 153 aa3.69□□□□□ -1.82
HDAC9-215ENST00000441986 Q6JHZ5 121 aa3.69□□□□□ -1.82
HDAC9-215ENST00000441986 FAM19A1Q7Z5A9 133 aa3.69□□□□□ -1.82
HDAC9-215ENST00000441986 OPRPNQ99935 248 aaPredicted RBP3.69□□□□□ -1.82
HDAC9-215ENST00000441986 SMIM2Q9BVW6 85 aa3.69□□□□□ -1.82
HDAC9-215ENST00000441986 SMIM26A0A096LP01 95 aa3.68□□□□□ -1.82
HDAC9-215ENST00000441986 TRBV6-5A0A0K0K1A5 114 aa3.68□□□□□ -1.82
HDAC9-215ENST00000441986 FAM236DA0A1B0GTK5 79 aa3.68□□□□□ -1.82
HDAC9-215ENST00000441986 FAM236CP0DP71 79 aa3.68□□□□□ -1.82
HDAC9-215ENST00000441986 RPL39LQ96EH5 51 aaKnown RBP3.68□□□□□ -1.82
HDAC9-215ENST00000441986 TIMM21Q9BVV7 248 aa3.68□□□□□ -1.82
HDAC9-215ENST00000441986 KRTAP1-4P0C5Y4 121 aa3.67□□□□□ -1.82
HDAC9-215ENST00000441986 FP248Q71RG6 208 aaPredicted RBP3.67□□□□□ -1.82
HDAC9-215ENST00000441986 SCGB3A1Q96QR1 104 aa3.67□□□□□ -1.82
HDAC9-215ENST00000441986 A0A0U1RRA0 63 aa3.66□□□□□ -1.82
HDAC9-215ENST00000441986 LEPROTO15243 131 aa3.66□□□□□ -1.82
HDAC9-215ENST00000441986 BCE1O60756 84 aa3.66□□□□□ -1.82
HDAC9-215ENST00000441986 TSHBP01222 138 aa3.66□□□□□ -1.82
HDAC9-215ENST00000441986 COX6CP09669 75 aa3.66□□□□□ -1.82
HDAC9-215ENST00000441986 UBE2BP63146 152 aa3.66□□□□□ -1.82
HDAC9-215ENST00000441986 LINC01561Q8N1V8 128 aa3.66□□□□□ -1.82
HDAC9-215ENST00000441986 COPS9Q8WXC6 57 aa3.66□□□□□ -1.82
HDAC9-215ENST00000441986 TRBV27A0A0K0K1C4 114 aa3.65□□□□□ -1.83
HDAC9-215ENST00000441986 FAM168BA1KXE4 195 aa3.65□□□□□ -1.83
HDAC9-215ENST00000441986 IGIPA6NJ69 53 aa3.65□□□□□ -1.83
HDAC9-215ENST00000441986 NDUFA1O15239 70 aa3.65□□□□□ -1.83
HDAC9-215ENST00000441986 TLX1NBP0CAT3 122 aa3.65□□□□□ -1.83
HDAC9-215ENST00000441986 POLR2KP53803 58 aaKnown RBP3.65□□□□□ -1.83
HDAC9-215ENST00000441986 SPAG11BQ08648 103 aa3.65□□□□□ -1.83
HDAC9-215ENST00000441986 Q1RN00 199 aa3.65□□□□□ -1.83
HDAC9-215ENST00000441986 SMIM29Q86T20 159 aa3.65□□□□□ -1.83
HDAC9-215ENST00000441986 MUSTN1Q8IVN3 82 aa3.65□□□□□ -1.83
HDAC9-215ENST00000441986 TMEM141Q96I45 108 aa3.65□□□□□ -1.83
HDAC9-215ENST00000441986 LITAFQ99732 161 aa3.65□□□□□ -1.83
HDAC9-215ENST00000441986 IGLV9-49A0A0B4J1Y8 123 aa3.64□□□□□ -1.83
HDAC9-215ENST00000441986 ZNF861PO60384 105 aa3.64□□□□□ -1.83
HDAC9-215ENST00000441986 PPP1R17O96001 155 aa3.64□□□□□ -1.83
HDAC9-215ENST00000441986 LGALS3P17931 250 aaKnown RBP3.64□□□□□ -1.83
HDAC9-215ENST00000441986 ATP5EP56381 51 aaPredicted RBP3.64□□□□□ -1.83
HDAC9-215ENST00000441986 ATP5EP2Q5VTU8 51 aa3.64□□□□□ -1.83
HDAC9-215ENST00000441986 C2orf66Q6UXQ4 117 aa3.64□□□□□ -1.83
HDAC9-215ENST00000441986 KRTAP11-1Q8IUC1 163 aa3.64□□□□□ -1.83
HDAC9-215ENST00000441986 TIMM17AQ99595 171 aa3.64□□□□□ -1.83
HDAC9-215ENST00000441986 UBE2D4Q9Y2X8 147 aa3.64□□□□□ -1.83
HDAC9-215ENST00000441986 C22orf24Q9Y442 160 aa3.64□□□□□ -1.83
HDAC9-215ENST00000441986 FSIP2Q5CZC0 6907 aa3.63□□□□□ -1.83
HDAC9-215ENST00000441986 H7BZZ5 65 aa3.63□□□□□ -1.83
HDAC9-215ENST00000441986 TIMM17BO60830 172 aa3.63□□□□□ -1.83
HDAC9-215ENST00000441986 CD164Q04900 197 aa3.63□□□□□ -1.83
HDAC9-215ENST00000441986 KLKP1Q107X0 134 aa3.63□□□□□ -1.83
HDAC9-215ENST00000441986 UNQ6190/PRO20217Q6UXQ8 127 aa3.63□□□□□ -1.83
HDAC9-215ENST00000441986 TYMSOSQ8TAI1 123 aa3.63□□□□□ -1.83
HDAC9-215ENST00000441986 CLEC2BQ92478 149 aa3.63□□□□□ -1.83
HDAC9-215ENST00000441986 OBSCN-AS1Q96MR7 158 aa3.63□□□□□ -1.83
HDAC9-215ENST00000441986 A0A0J9YXY3 114 aa3.62□□□□□ -1.83
HDAC9-215ENST00000441986 H7C2G1 150 aa3.62□□□□□ -1.83
HDAC9-215ENST00000441986 RNASE13Q5GAN3 156 aaKnown RBP3.62□□□□□ -1.83
HDAC9-215ENST00000441986 PRR15Q8IV56 129 aa3.62□□□□□ -1.83
HDAC9-215ENST00000441986 IGHV3OR16-9A0A0B4J2B5 98 aa3.61□□□□□ -1.83
HDAC9-215ENST00000441986 TRBV7-6A0A0J9YX20 115 aa3.61□□□□□ -1.83
HDAC9-215ENST00000441986 C6orf48Q9UBA6 75 aa3.61□□□□□ -1.83
HDAC9-215ENST00000441986 LAMTOR3Q9UHA4 124 aa3.61□□□□□ -1.83
HDAC9-215ENST00000441986 TRBV10-3A0A0K0K1G6 114 aa3.6□□□□□ -1.83
HDAC9-215ENST00000441986 SMIM1B2RUZ4 78 aa3.6□□□□□ -1.83
HDAC9-215ENST00000441986 RPL28P46779 137 aaKnown RBP3.6□□□□□ -1.83
HDAC9-215ENST00000441986 PMAIP1Q13794 54 aa3.6□□□□□ -1.83
HDAC9-215ENST00000441986 TPRXLQ17RH7 258 aa3.6□□□□□ -1.83
HDAC9-215ENST00000441986 KRTAP7-1Q8IUC3 87 aa3.6□□□□□ -1.83
HDAC9-215ENST00000441986 BRK1Q8WUW1 75 aa3.6□□□□□ -1.83
HDAC9-215ENST00000441986 IGLV7-46A0A075B6I9 117 aa3.59□□□□□ -1.83
HDAC9-215ENST00000441986 A0A087X002 238 aa3.59□□□□□ -1.83
HDAC9-215ENST00000441986 NDUFC1O43677 76 aa3.59□□□□□ -1.83
HDAC9-215ENST00000441986 CCKP06307 115 aa3.59□□□□□ -1.83
HDAC9-215ENST00000441986 LINC01547P58512 204 aaPredicted RBP3.59□□□□□ -1.83
HDAC9-215ENST00000441986 KIAA0087Q14695 138 aa3.59□□□□□ -1.83
HDAC9-215ENST00000441986 C9orf129Q5T035 196 aaKnown RBP3.59□□□□□ -1.83
HDAC9-215ENST00000441986 CRCT1Q9UGL9 99 aa3.59□□□□□ -1.83
HDAC9-215ENST00000441986 TRAV7A0A075B6U4 112 aa3.58□□□□□ -1.84
HDAC9-215ENST00000441986 DNAL4O96015 105 aa3.58□□□□□ -1.84
HDAC9-215ENST00000441986 S100A7L2Q5SY68 101 aa3.58□□□□□ -1.84
HDAC9-215ENST00000441986 A0A087WVE0 104 aa3.57□□□□□ -1.84
HDAC9-215ENST00000441986 BAALC-AS2P0C853 105 aa3.57□□□□□ -1.84
HDAC9-215ENST00000441986 RPL39P62891 51 aaKnown RBP3.57□□□□□ -1.84
HDAC9-215ENST00000441986 ADAMTSL4-AS1Q5T5F5 129 aa3.57□□□□□ -1.84
HDAC9-215ENST00000441986 C20orf197Q8N268 126 aa3.57□□□□□ -1.84
HDAC9-215ENST00000441986 LINC00304Q8N9R0 145 aa3.57□□□□□ -1.84
HDAC9-215ENST00000441986 RETNLBQ9BQ08 111 aa3.57□□□□□ -1.84
HDAC9-215ENST00000441986 LINC00846Q9NV44 126 aa3.57□□□□□ -1.84
HDAC9-215ENST00000441986 MUC17Q685J3 4493 aa3.56□□□□□ -1.84
HDAC9-215ENST00000441986 TRAV13-2A0A0B4J235 113 aa3.56□□□□□ -1.84
HDAC9-215ENST00000441986 IGKV3D-7A0A0C4DH55 119 aa3.56□□□□□ -1.84
HDAC9-215ENST00000441986 FAM229BQ4G0N7 80 aa3.56□□□□□ -1.84
HDAC9-215ENST00000441986 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
HDAC9-215ENST00000441986 MRPL55Q7Z7F7 128 aaKnown RBP3.56□□□□□ -1.84
HDAC9-215ENST00000441986 LINC00337Q8N6G1 96 aa3.56□□□□□ -1.84
HDAC9-215ENST00000441986 FAM104AQ969W3 186 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms