RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 C10orf113Q5VZT2 155 aa2.16□□□□□ -2.06
CDC42BPA-207ENST00000441725 SPATA8Q6RVD6 105 aa2.16□□□□□ -2.06
CDC42BPA-207ENST00000441725 TMEM14CQ9P0S9 112 aa2.16□□□□□ -2.06
CDC42BPA-207ENST00000441725 PCLOQ9Y6V0 5065 aa2.16□□□□□ -2.06
CDC42BPA-207ENST00000441725 TLN2Q9Y4G6 2542 aa2.16□□□□□ -2.06
CDC42BPA-207ENST00000441725 TRBV6-1A0A0K0K1D8 114 aa2.16□□□□□ -2.06
CDC42BPA-207ENST00000441725 UQCR11O14957 56 aa2.16□□□□□ -2.06
CDC42BPA-207ENST00000441725 IGLV3-19P01714 112 aa2.16□□□□□ -2.06
CDC42BPA-207ENST00000441725 A0A0G2JQZ4 141 aa2.15□□□□□ -2.07
CDC42BPA-207ENST00000441725 NBDYA0A0U1RRE5 68 aa2.15□□□□□ -2.07
CDC42BPA-207ENST00000441725 LINC00959A0A1B0GUT2 108 aa2.15□□□□□ -2.07
CDC42BPA-207ENST00000441725 MGPP08493 103 aa2.15□□□□□ -2.07
CDC42BPA-207ENST00000441725 WFDC10AQ9H1F0 79 aa2.15□□□□□ -2.07
CDC42BPA-207ENST00000441725 TACC2O95359 2948 aa2.15□□□□□ -2.07
CDC42BPA-207ENST00000441725 ACANP16112 2415 aa2.15□□□□□ -2.07
CDC42BPA-207ENST00000441725 BIRC6Q9NR09 4857 aa2.15□□□□□ -2.07
CDC42BPA-207ENST00000441725 DCHS2Q6V1P9 2916 aa2.15□□□□□ -2.07
CDC42BPA-207ENST00000441725 BSNQ9UPA5 3926 aa2.15□□□□□ -2.07
CDC42BPA-207ENST00000441725 IGLV6-57P01721 117 aa2.15□□□□□ -2.07
CDC42BPA-207ENST00000441725 KMT2CQ8NEZ4 4911 aaKnown RBP2.14□□□□□ -2.07
CDC42BPA-207ENST00000441725 NDUFA3O95167 84 aa2.14□□□□□ -2.07
CDC42BPA-207ENST00000441725 TPRXLQ17RH7 258 aa2.14□□□□□ -2.07
CDC42BPA-207ENST00000441725 Q6ZTI0 123 aa2.14□□□□□ -2.07
CDC42BPA-207ENST00000441725 LINC00472Q9H8W2 130 aa2.14□□□□□ -2.07
CDC42BPA-207ENST00000441725 CCL26Q9Y258 94 aa2.14□□□□□ -2.07
CDC42BPA-207ENST00000441725 CACNA1CQ13936 2221 aa2.14□□□□□ -2.07
CDC42BPA-207ENST00000441725 CUBNO60494 3623 aa2.13□□□□□ -2.07
CDC42BPA-207ENST00000441725 SPACA4Q8TDM5 124 aa2.13□□□□□ -2.07
CDC42BPA-207ENST00000441725 GAFA1Q96PS6 74 aa2.13□□□□□ -2.07
CDC42BPA-207ENST00000441725 JMJD7-PLA2G4BH0Y9G9 81 aa2.13□□□□□ -2.07
CDC42BPA-207ENST00000441725 ZNF625Q96I27 306 aaPredicted RBP2.13□□□□□ -2.07
CDC42BPA-207ENST00000441725 PSORS1C2Q9UIG4 136 aa2.13□□□□□ -2.07
CDC42BPA-207ENST00000441725 F5P12259 2224 aa2.12□□□□□ -2.07
CDC42BPA-207ENST00000441725 TRBV6-4A0A1B0GX49 114 aa2.12□□□□□ -2.07
CDC42BPA-207ENST00000441725 DEFB112Q30KQ8 113 aa2.12□□□□□ -2.07
CDC42BPA-207ENST00000441725 LINC00304Q8N9R0 145 aa2.12□□□□□ -2.07
CDC42BPA-207ENST00000441725 Q96NJ1 140 aa2.12□□□□□ -2.07
CDC42BPA-207ENST00000441725 TRGV4A0A0C4DH28 118 aa2.12□□□□□ -2.07
CDC42BPA-207ENST00000441725 SPRR5A0A1B0GTR4 108 aa2.12□□□□□ -2.07
CDC42BPA-207ENST00000441725 IGKV2-29A2NJV5 120 aaPredicted RBP2.12□□□□□ -2.07
CDC42BPA-207ENST00000441725 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
CDC42BPA-207ENST00000441725 ABCA1O95477 2261 aa2.12□□□□□ -2.07
CDC42BPA-207ENST00000441725 MXRA5Q9NR99 2828 aa2.11□□□□□ -2.07
CDC42BPA-207ENST00000441725 EPPK1P58107 5090 aaKnown RBP2.11□□□□□ -2.07
CDC42BPA-207ENST00000441725 IGKV2-40A0A087WW87 121 aaPredicted RBP2.11□□□□□ -2.07
CDC42BPA-207ENST00000441725 IGKV2-24A0A0C4DH68 120 aa2.11□□□□□ -2.07
CDC42BPA-207ENST00000441725 NDUFA4O00483 81 aa2.11□□□□□ -2.07
CDC42BPA-207ENST00000441725 IGKV2D-40P01614 121 aaPredicted RBP2.11□□□□□ -2.07
CDC42BPA-207ENST00000441725 CD52P31358 61 aa2.1□□□□□ -2.07
CDC42BPA-207ENST00000441725 COA5Q86WW8 74 aa2.1□□□□□ -2.07
CDC42BPA-207ENST00000441725 Q9Y3F1 56 aa2.1□□□□□ -2.07
CDC42BPA-207ENST00000441725 PRRC2CQ9Y520 2896 aaKnown RBP2.1□□□□□ -2.07
CDC42BPA-207ENST00000441725 TRGV1A0A0A0MS02 117 aa2.1□□□□□ -2.07
CDC42BPA-207ENST00000441725 IGKV4-1P06312 121 aa2.1□□□□□ -2.07
CDC42BPA-207ENST00000441725 RYR1P21817 5038 aa2.1□□□□□ -2.07
CDC42BPA-207ENST00000441725 HYDINQ4G0P3 5121 aa2.1□□□□□ -2.07
CDC42BPA-207ENST00000441725 MAP1AP78559 2803 aaPredicted RBP2.1□□□□□ -2.07
CDC42BPA-207ENST00000441725 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.09□□□□□ -2.07
CDC42BPA-207ENST00000441725 RPL37AP61513 92 aaKnown RBP2.09□□□□□ -2.07
CDC42BPA-207ENST00000441725 C5orf56Q8N8D9 126 aa2.09□□□□□ -2.07
CDC42BPA-207ENST00000441725 C4orf3Q8WVX3 66 aa2.09□□□□□ -2.07
CDC42BPA-207ENST00000441725 NSD1Q96L73 2696 aaPredicted RBP2.09□□□□□ -2.07
CDC42BPA-207ENST00000441725 HAMPP81172 84 aa2.09□□□□□ -2.08
CDC42BPA-207ENST00000441725 KNTC1P50748 2209 aa2.09□□□□□ -2.08
CDC42BPA-207ENST00000441725 CADP27708 2225 aa2.08□□□□□ -2.08
CDC42BPA-207ENST00000441725 NCR3O14931 201 aa2.08□□□□□ -2.08
CDC42BPA-207ENST00000441725 KNL1Q8NG31 2342 aa2.08□□□□□ -2.08
CDC42BPA-207ENST00000441725 COL4A2P08572 1712 aa2.08□□□□□ -2.08
CDC42BPA-207ENST00000441725 ZNF469Q96JG9 3925 aaPredicted RBP2.08□□□□□ -2.08
CDC42BPA-207ENST00000441725 TRGV2A0A075B6R0 118 aa2.08□□□□□ -2.08
CDC42BPA-207ENST00000441725 UBR4Q5T4S7 5183 aa2.07□□□□□ -2.08
CDC42BPA-207ENST00000441725 RPS27LQ71UM5 84 aaKnown RBP2.07□□□□□ -2.08
CDC42BPA-207ENST00000441725 FXYD4P59646 89 aa2.06□□□□□ -2.08
CDC42BPA-207ENST00000441725 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
CDC42BPA-207ENST00000441725 TMEM167BQ9NRX6 74 aa2.06□□□□□ -2.08
CDC42BPA-207ENST00000441725 MGAM2Q2M2H8 2515 aa2.06□□□□□ -2.08
CDC42BPA-207ENST00000441725 VPS13CQ709C8 3753 aa2.06□□□□□ -2.08
CDC42BPA-207ENST00000441725 ANK2Q01484 3957 aa2.06□□□□□ -2.08
CDC42BPA-207ENST00000441725 LOC110117498A0A087WWA1 95 aa2.05□□□□□ -2.08
CDC42BPA-207ENST00000441725 KRTAP10-8P60410 259 aa2.05□□□□□ -2.08
CDC42BPA-207ENST00000441725 KCNQ1DNQ9H478 68 aa2.05□□□□□ -2.08
CDC42BPA-207ENST00000441725 VWFP04275 2813 aa2.05□□□□□ -2.08
CDC42BPA-207ENST00000441725 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.05□□□□□ -2.083e-11■■■□□ 16.9
CDC42BPA-207ENST00000441725 A0A1B0GU69 56 aa2.05□□□□□ -2.08
CDC42BPA-207ENST00000441725 COX7BP24311 80 aa2.05□□□□□ -2.08
CDC42BPA-207ENST00000441725 TFF3Q07654 80 aa2.05□□□□□ -2.08
CDC42BPA-207ENST00000441725 DEFB114Q30KQ6 69 aa2.05□□□□□ -2.08
CDC42BPA-207ENST00000441725 ETDCA0A1B0GVM5 59 aa2.04□□□□□ -2.08
CDC42BPA-207ENST00000441725 TENM1Q9UKZ4 2725 aa2.04□□□□□ -2.08
CDC42BPA-207ENST00000441725 H0YGX0 51 aa2.03□□□□□ -2.08
CDC42BPA-207ENST00000441725 COX17Q14061 63 aa2.03□□□□□ -2.08
CDC42BPA-207ENST00000441725 WNK1Q9H4A3 2382 aa2.03□□□□□ -2.08
CDC42BPA-207ENST00000441725 SORL1Q92673 2214 aa2.03□□□□□ -2.08
CDC42BPA-207ENST00000441725 KRTAP13-3Q3SY46 172 aa2.03□□□□□ -2.08
CDC42BPA-207ENST00000441725 ACYP2P14621 99 aa2.02□□□□□ -2.09
CDC42BPA-207ENST00000441725 C10orf55Q5SWW7 151 aa2.02□□□□□ -2.09
CDC42BPA-207ENST00000441725 H3BRN7 92 aa2.02□□□□□ -2.09
CDC42BPA-207ENST00000441725 IAPPP10997 89 aa2.02□□□□□ -2.09
CDC42BPA-207ENST00000441725 CRIP1P50238 77 aa2.02□□□□□ -2.09
CDC42BPA-207ENST00000441725 RYR2Q92736 4967 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms