RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 TRBV7-4A0A0J9YYF1 115 aa12.22□□□□□ -0.45
VRK2-207ENST00000440705 CCKP06307 115 aa12.22□□□□□ -0.45
VRK2-207ENST00000440705 RPL37AP61513 92 aaKnown RBP12.22□□□□□ -0.45
VRK2-207ENST00000440705 SRRM2Q9UQ35 2752 aaKnown RBP12.22□□□□□ -0.45
VRK2-207ENST00000440705 LINC00483Q53H64 154 aa12.22□□□□□ -0.45
VRK2-207ENST00000440705 Q6ZQT0 140 aa12.22□□□□□ -0.45
VRK2-207ENST00000440705 FAM240AA0A1B0GVK7 77 aa12.21□□□□□ -0.45
VRK2-207ENST00000440705 C21orf62-AS1Q17RA5 79 aa12.21□□□□□ -0.45
VRK2-207ENST00000440705 SMR3BP02814 79 aaPredicted RBP12.2□□□□□ -0.46
VRK2-207ENST00000440705 ACYP1P07311 99 aa12.19□□□□□ -0.46
VRK2-207ENST00000440705 IGLV8-61A0A075B6I0 122 aa12.17□□□□□ -0.46
VRK2-207ENST00000440705 CDK2AP2O75956 126 aa12.16□□□□□ -0.46
VRK2-207ENST00000440705 APOBP04114 4563 aaKnown RBP12.14□□□□□ -0.47
VRK2-207ENST00000440705 Q6JHZ5 121 aa12.12□□□□□ -0.47
VRK2-207ENST00000440705 VPS25Q9BRG1 176 aa12.12□□□□□ -0.47
VRK2-207ENST00000440705 SPINK6Q6UWN8 80 aa12.11□□□□□ -0.47
VRK2-207ENST00000440705 VPS13BQ7Z7G8 4022 aa12.11□□□□□ -0.47
VRK2-207ENST00000440705 IGFL1Q6UW32 110 aa12.1□□□□□ -0.47
VRK2-207ENST00000440705 ANAPC11Q9NYG5 84 aa12.1□□□□□ -0.47
VRK2-207ENST00000440705 IGLV9-49A0A0B4J1Y8 123 aa12.09□□□□□ -0.47
VRK2-207ENST00000440705 C9orf153Q5TBE3 101 aa12.07□□□□□ -0.48
VRK2-207ENST00000440705 CDIP1Q9H305 208 aa12.07□□□□□ -0.48
VRK2-207ENST00000440705 FAM229AH3BQW9 127 aa12.06□□□□□ -0.48
VRK2-207ENST00000440705 A0A1B0GW54 56 aa12.06□□□□□ -0.48
VRK2-207ENST00000440705 A0A1W2PNM2 257 aa12.06□□□□□ -0.48
VRK2-207ENST00000440705 KRTAP10-4P60372 401 aaPredicted RBP12.06□□□□□ -0.48
VRK2-207ENST00000440705 Q8NBF4 154 aa12.06□□□□□ -0.48
VRK2-207ENST00000440705 PLA2G1BP04054 148 aaKnown RBP12.05□□□□□ -0.48
VRK2-207ENST00000440705 LINC00846Q9NV44 126 aa12.05□□□□□ -0.48
VRK2-207ENST00000440705 FAM229BQ4G0N7 80 aa12.04□□□□□ -0.48
VRK2-207ENST00000440705 MOBPQ13875 183 aa12.03□□□□□ -0.48
VRK2-207ENST00000440705 A0A0G2JQZ4 141 aa12.02□□□□□ -0.49
VRK2-207ENST00000440705 KRTAP1-4P0C5Y4 121 aa12□□□□□ -0.49
VRK2-207ENST00000440705 CRYGAP11844 174 aa12□□□□□ -0.49
VRK2-207ENST00000440705 UBL5Q9BZL1 73 aa12□□□□□ -0.49
VRK2-207ENST00000440705 Q6Q795 121 aa11.98□□□□□ -0.49
VRK2-207ENST00000440705 SSBP3-AS1Q7Z2R9 100 aa11.97□□□□□ -0.49
VRK2-207ENST00000440705 LINC00643Q86TS7 51 aa11.97□□□□□ -0.49
VRK2-207ENST00000440705 A0A087X002 238 aa11.96□□□□□ -0.5
VRK2-207ENST00000440705 Q5VSD8 79 aa11.94□□□□□ -0.5
VRK2-207ENST00000440705 FAT1Q14517 4588 aa11.94□□□□□ -0.5
VRK2-207ENST00000440705 Q6ZVQ6 151 aa11.93□□□□□ -0.5
VRK2-207ENST00000440705 KRTAP13-2Q52LG2 175 aa11.92□□□□□ -0.5
VRK2-207ENST00000440705 NREPQ16612 68 aa11.91□□□□□ -0.5
VRK2-207ENST00000440705 SIGMAR1Q99720 223 aa11.91□□□□□ -0.5
VRK2-207ENST00000440705 HSPG2P98160 4391 aa11.9□□□□□ -0.5
VRK2-207ENST00000440705 A0A087WSZ3 146 aa11.9□□□□□ -0.5
VRK2-207ENST00000440705 TRBV7-7A0A0K0K1E9 115 aa11.9□□□□□ -0.5
VRK2-207ENST00000440705 EPPK1P58107 5090 aaKnown RBP11.88□□□□□ -0.51
VRK2-207ENST00000440705 MT-ATP8P03928 68 aa11.87□□□□□ -0.51
VRK2-207ENST00000440705 CD164Q04900 197 aa11.87□□□□□ -0.51
VRK2-207ENST00000440705 RYR1P21817 5038 aa11.86□□□□□ -0.51
VRK2-207ENST00000440705 HRCT1Q6UXD1 115 aa11.86□□□□□ -0.51
VRK2-207ENST00000440705 Q8N1X5 172 aa11.86□□□□□ -0.51
VRK2-207ENST00000440705 ATP5EP2Q5VTU8 51 aa11.85□□□□□ -0.51
VRK2-207ENST00000440705 TYMSOSQ8TAI1 123 aa11.85□□□□□ -0.51
VRK2-207ENST00000440705 PRR26Q8N8Z3 221 aa11.82□□□□□ -0.52
VRK2-207ENST00000440705 IGKV3D-7A0A0C4DH55 119 aa11.81□□□□□ -0.52
VRK2-207ENST00000440705 SS18L2Q9UHA2 77 aa11.81□□□□□ -0.52
VRK2-207ENST00000440705 CXCL6P80162 114 aa11.8□□□□□ -0.52
VRK2-207ENST00000440705 KIAA1109Q2LD37 5005 aa11.79□□□□□ -0.52
VRK2-207ENST00000440705 KRTAP17-1Q9BYP8 105 aa11.78□□□□□ -0.52
VRK2-207ENST00000440705 BPY2O14599 106 aa11.78□□□□□ -0.52
VRK2-207ENST00000440705 IMUPQ9GZP8 106 aa11.78□□□□□ -0.52
VRK2-207ENST00000440705 C4orf48Q5BLP8 95 aa11.76□□□□□ -0.53
VRK2-207ENST00000440705 PKHD1L1Q86WI1 4243 aa11.75□□□□□ -0.53
VRK2-207ENST00000440705 LINC00472Q9H8W2 130 aa11.72□□□□□ -0.53
VRK2-207ENST00000440705 SPAG11AQ6PDA7 123 aa11.71□□□□□ -0.54
VRK2-207ENST00000440705 LINC00304Q8N9R0 145 aa11.71□□□□□ -0.54
VRK2-207ENST00000440705 SPINK1P00995 79 aa11.7□□□□□ -0.54
VRK2-207ENST00000440705 HIST1H4AP62805 103 aaKnown RBP11.69□□□□□ -0.54
VRK2-207ENST00000440705 Q5XG85 94 aa11.69□□□□□ -0.54
VRK2-207ENST00000440705 DEFB116Q30KQ4 102 aa11.68□□□□□ -0.54
VRK2-207ENST00000440705 J3KT08 172 aa11.68□□□□□ -0.54
VRK2-207ENST00000440705 ASB16-AS1Q495Z4 193 aa11.68□□□□□ -0.54
VRK2-207ENST00000440705 LIMD2Q9BT23 127 aa11.68□□□□□ -0.54
VRK2-207ENST00000440705 Q96NJ1 140 aa11.66□□□□□ -0.54
VRK2-207ENST00000440705 DSCR10P59022 87 aa11.65□□□□□ -0.55
VRK2-207ENST00000440705 RPS29P62273 56 aaKnown RBP11.64□□□□□ -0.55
VRK2-207ENST00000440705 IGKV4-1P06312 121 aa11.62□□□□□ -0.55
VRK2-207ENST00000440705 SCGB1A1P11684 91 aa11.61□□□□□ -0.55
VRK2-207ENST00000440705 KRTAP10-8P60410 259 aa11.61□□□□□ -0.55
VRK2-207ENST00000440705 Q8N9L7 120 aa11.61□□□□□ -0.55
VRK2-207ENST00000440705 A0A087WVE0 104 aa11.6□□□□□ -0.55
VRK2-207ENST00000440705 A8MWP4 228 aa11.59□□□□□ -0.55
VRK2-207ENST00000440705 K7EQZ3 153 aa11.58□□□□□ -0.56
VRK2-207ENST00000440705 NDUFB1O75438 58 aa11.57□□□□□ -0.56
VRK2-207ENST00000440705 C1orf195Q5TG92 126 aa11.55□□□□□ -0.56
VRK2-207ENST00000440705 PRR15Q8IV56 129 aa11.55□□□□□ -0.56
VRK2-207ENST00000440705 FAM236AA0A1B0GUQ0 79 aa11.53□□□□□ -0.56
VRK2-207ENST00000440705 FAM236BA0A1B0GV22 79 aa11.53□□□□□ -0.56
VRK2-207ENST00000440705 KRTAP4-5Q9BYR2 181 aa11.53□□□□□ -0.56
VRK2-207ENST00000440705 OXTP01178 125 aa11.5□□□□□ -0.57
VRK2-207ENST00000440705 BIRC6Q9NR09 4857 aa11.5□□□□□ -0.57
VRK2-207ENST00000440705 FLG2Q5D862 2391 aaPredicted RBP11.5□□□□□ -0.57
VRK2-207ENST00000440705 LRP1Q07954 4544 aaKnown RBP11.48□□□□□ -0.57
VRK2-207ENST00000440705 A0A1B0GVX0 72 aa11.48□□□□□ -0.57
VRK2-207ENST00000440705 HCG22E2RYF7 251 aa11.45□□□□□ -0.58
VRK2-207ENST00000440705 MT1HL1P0DM35 61 aa11.45□□□□□ -0.58
VRK2-207ENST00000440705 FAT3Q8TDW7 4589 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms