RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 IFITM1P13164 125 aa10.39□□□□□ -0.75
TRIM39-210ENST00000440271 SCGB1D4Q6XE38 83 aa10.39□□□□□ -0.75
TRIM39-210ENST00000440271 KRTAP9-3Q9BYQ3 159 aa10.39□□□□□ -0.75
TRIM39-210ENST00000440271 C20orf166-AS1Q96NR2 134 aa10.38□□□□□ -0.75
TRIM39-210ENST00000440271 OCIAD2Q56VL3 154 aa10.36□□□□□ -0.75
TRIM39-210ENST00000440271 MUSTN1Q8IVN3 82 aa10.36□□□□□ -0.75
TRIM39-210ENST00000440271 SLC7A5P1Q8MH63 180 aa10.36□□□□□ -0.75
TRIM39-210ENST00000440271 TRAV13-2A0A0B4J235 113 aa10.35□□□□□ -0.75
TRIM39-210ENST00000440271 A8MUU9 505 aa10.35□□□□□ -0.75
TRIM39-210ENST00000440271 LST1O00453 97 aa10.35□□□□□ -0.75
TRIM39-210ENST00000440271 PET117Q6UWS5 81 aa10.35□□□□□ -0.75
TRIM39-210ENST00000440271 KRTAP10-10P60014 251 aa10.33□□□□□ -0.76
TRIM39-210ENST00000440271 LINC00575Q6W349 94 aa10.33□□□□□ -0.76
TRIM39-210ENST00000440271 Q6ZQY7 126 aa10.33□□□□□ -0.76
TRIM39-210ENST00000440271 Q6ZVH6 145 aa10.33□□□□□ -0.76
TRIM39-210ENST00000440271 VAMP3Q15836 100 aa10.32□□□□□ -0.76
TRIM39-210ENST00000440271 hADV29S1A0JD25 119 aa10.3□□□□□ -0.76
TRIM39-210ENST00000440271 FAM236DA0A1B0GTK5 79 aa10.28□□□□□ -0.76
TRIM39-210ENST00000440271 COLCA2A8K830 154 aa10.28□□□□□ -0.76
TRIM39-210ENST00000440271 FAM236CP0DP71 79 aa10.28□□□□□ -0.76
TRIM39-210ENST00000440271 C3orf79P0CE67 100 aa10.25□□□□□ -0.77
TRIM39-210ENST00000440271 ANKRD39Q53RE8 183 aa10.24□□□□□ -0.77
TRIM39-210ENST00000440271 LINC00846Q9NV44 126 aa10.24□□□□□ -0.77
TRIM39-210ENST00000440271 KRTAP16-1A8MUX0 517 aa10.23□□□□□ -0.77
TRIM39-210ENST00000440271 H3BUT2 72 aa10.22□□□□□ -0.77
TRIM39-210ENST00000440271 SNHG12Q9BXW3 62 aa10.22□□□□□ -0.77
TRIM39-210ENST00000440271 SS18L2Q9UHA2 77 aa10.22□□□□□ -0.77
TRIM39-210ENST00000440271 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.21□□□□□ -0.77
TRIM39-210ENST00000440271 HIST1H2BKO60814 126 aa10.2□□□□□ -0.78
TRIM39-210ENST00000440271 HIST1H2BJP06899 126 aa10.2□□□□□ -0.78
TRIM39-210ENST00000440271 HIST1H2BOP23527 126 aa10.2□□□□□ -0.78
TRIM39-210ENST00000440271 HIST1H2BBP33778 126 aa10.2□□□□□ -0.78
TRIM39-210ENST00000440271 HIST1H2BDP58876 126 aa10.2□□□□□ -0.78
TRIM39-210ENST00000440271 HIST1H2BCP62807 126 aa10.2□□□□□ -0.78
TRIM39-210ENST00000440271 HIST2H2BEQ16778 126 aa10.2□□□□□ -0.78
TRIM39-210ENST00000440271 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.2□□□□□ -0.78
TRIM39-210ENST00000440271 HIST1H2BHQ93079 126 aa10.2□□□□□ -0.78
TRIM39-210ENST00000440271 HIST1H2BNQ99877 126 aa10.2□□□□□ -0.78
TRIM39-210ENST00000440271 HIST1H2BMQ99879 126 aa10.2□□□□□ -0.78
TRIM39-210ENST00000440271 KRTAP19-6Q3LI70 58 aa10.19□□□□□ -0.78
TRIM39-210ENST00000440271 MPLKIPQ8TAP9 179 aa10.19□□□□□ -0.78
TRIM39-210ENST00000440271 PPDPFLQ8WWR9 84 aa10.19□□□□□ -0.78
TRIM39-210ENST00000440271 SCGB1D1O95968 90 aa10.18□□□□□ -0.78
TRIM39-210ENST00000440271 DSCR10P59022 87 aa10.18□□□□□ -0.78
TRIM39-210ENST00000440271 KRTDAPP60985 99 aa10.18□□□□□ -0.78
TRIM39-210ENST00000440271 RBM12B-AS1Q9P1G2 102 aa10.18□□□□□ -0.78
TRIM39-210ENST00000440271 HRES1P13985 223 aa10.15□□□□□ -0.78
TRIM39-210ENST00000440271 ATOH7Q8N100 152 aa10.14□□□□□ -0.79
TRIM39-210ENST00000440271 TEN1Q86WV5 123 aa10.13□□□□□ -0.79
TRIM39-210ENST00000440271 A0A087WSZ3 146 aa10.1□□□□□ -0.79
TRIM39-210ENST00000440271 KRTAP6-3Q3LI67 103 aa10.08□□□□□ -0.8
TRIM39-210ENST00000440271 LINC00313P59037 77 aa10.07□□□□□ -0.8
TRIM39-210ENST00000440271 BVES-AS1Q5T3Y7 98 aa10.07□□□□□ -0.8
TRIM39-210ENST00000440271 NOTCH2NLQ7Z3S9 236 aa10.07□□□□□ -0.8
TRIM39-210ENST00000440271 SIGMAR1Q99720 223 aa10.04□□□□□ -0.8
TRIM39-210ENST00000440271 NDUFV3P56181 108 aaKnown RBP10.02□□□□□ -0.81
TRIM39-210ENST00000440271 C12orf57Q99622 126 aa10.02□□□□□ -0.81
TRIM39-210ENST00000440271 COA6Q5JTJ3 125 aaKnown RBP10.01□□□□□ -0.81
TRIM39-210ENST00000440271 SNRPEP62304 92 aaKnown RBP9.99□□□□□ -0.81
TRIM39-210ENST00000440271 MTURNQ8N3F0 131 aa9.97□□□□□ -0.81
TRIM39-210ENST00000440271 IGKV4-1P06312 121 aa9.96□□□□□ -0.82
TRIM39-210ENST00000440271 H3BMG7 143 aa9.95□□□□□ -0.82
TRIM39-210ENST00000440271 A0A1W2PNM2 257 aa9.93□□□□□ -0.82
TRIM39-210ENST00000440271 SNCGO76070 127 aa9.93□□□□□ -0.82
TRIM39-210ENST00000440271 FAM218AQ96MZ4 157 aa9.9□□□□□ -0.82
TRIM39-210ENST00000440271 A8MWP4 228 aa9.89□□□□□ -0.83
TRIM39-210ENST00000440271 H0YGX0 51 aa9.87□□□□□ -0.83
TRIM39-210ENST00000440271 HIST1H4GQ99525 98 aa9.87□□□□□ -0.83
TRIM39-210ENST00000440271 FABP2P12104 132 aa9.86□□□□□ -0.83
TRIM39-210ENST00000440271 DEFB116Q30KQ4 102 aa9.86□□□□□ -0.83
TRIM39-210ENST00000440271 Q8N9P0 234 aaPredicted RBP9.86□□□□□ -0.83
TRIM39-210ENST00000440271 IGHV6-1A0A0B4J1U7 121 aa9.85□□□□□ -0.83
TRIM39-210ENST00000440271 HSBP1L1C9JCN9 74 aa9.84□□□□□ -0.83
TRIM39-210ENST00000440271 SPINK7P58062 85 aa9.83□□□□□ -0.84
TRIM39-210ENST00000440271 NEBP20929 6669 aa9.83□□□□□ -0.84
TRIM39-210ENST00000440271 TRBV7-4A0A0J9YYF1 115 aa9.82□□□□□ -0.84
TRIM39-210ENST00000440271 GHRHP01286 108 aa9.82□□□□□ -0.84
TRIM39-210ENST00000440271 LINC00472Q9H8W2 130 aa9.82□□□□□ -0.84
TRIM39-210ENST00000440271 ANKRD29Q8N6D5 301 aa9.79□□□□□ -0.84
TRIM39-210ENST00000440271 ZCCHC13Q8WW36 166 aaKnown RBP9.79□□□□□ -0.84
TRIM39-210ENST00000440271 RAB37Q96AX2 223 aa9.78□□□□□ -0.84
TRIM39-210ENST00000440271 A0A1B0GX51 115 aa9.76□□□□□ -0.85
TRIM39-210ENST00000440271 C8orf87E5RJ46 101 aa9.74□□□□□ -0.85
TRIM39-210ENST00000440271 A0A0B4J2C4 111 aa9.71□□□□□ -0.86
TRIM39-210ENST00000440271 A0A1B0GV72 72 aa9.71□□□□□ -0.86
TRIM39-210ENST00000440271 A0A1B0GVX0 72 aa9.71□□□□□ -0.86
TRIM39-210ENST00000440271 WFDC13Q8IUB5 93 aa9.7□□□□□ -0.86
TRIM39-210ENST00000440271 HIST1H2BLQ99880 126 aa9.69□□□□□ -0.86
TRIM39-210ENST00000440271 TRACP01848 142 aa9.68□□□□□ -0.86
TRIM39-210ENST00000440271 CCKP06307 115 aa9.68□□□□□ -0.86
TRIM39-210ENST00000440271 COX8AP10176 69 aa9.68□□□□□ -0.86
TRIM39-210ENST00000440271 HIST3H2BBQ8N257 126 aa9.67□□□□□ -0.86
TRIM39-210ENST00000440271 S100A2P29034 98 aa9.65□□□□□ -0.86
TRIM39-210ENST00000440271 MUC12Q9UKN1 5478 aa9.65□□□□□ -0.86
TRIM39-210ENST00000440271 DLEU1O43261 78 aa9.64□□□□□ -0.87
TRIM39-210ENST00000440271 ORMDL1Q9P0S3 153 aa9.63□□□□□ -0.87
TRIM39-210ENST00000440271 KRTAP20-1Q3LI63 56 aa9.61□□□□□ -0.87
TRIM39-210ENST00000440271 PRO1854Q9UHT4 67 aa9.61□□□□□ -0.87
TRIM39-210ENST00000440271 H3BQ85 93 aa9.6□□□□□ -0.87
TRIM39-210ENST00000440271 TRIAP1O43715 76 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms