RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 LAMTOR3Q9UHA4 124 aa3.06□□□□□ -1.92
EDEM3-203ENST00000439962 HERC1Q15751 4861 aa3.06□□□□□ -1.92
EDEM3-203ENST00000439962 LOC107984640A0A0U1RRK4 108 aa3.06□□□□□ -1.92
EDEM3-203ENST00000439962 USP17L23D6RBM5 183 aa3.06□□□□□ -1.92
EDEM3-203ENST00000439962 SPRR1AP35321 89 aa3.06□□□□□ -1.92
EDEM3-203ENST00000439962 TMEM258P61165 79 aa3.06□□□□□ -1.92
EDEM3-203ENST00000439962 Q6ZQY7 126 aa3.06□□□□□ -1.92
EDEM3-203ENST00000439962 LRCOL1A6NCL2 159 aa3.05□□□□□ -1.92
EDEM3-203ENST00000439962 CHTF8P0CG12 524 aa3.05□□□□□ -1.92
EDEM3-203ENST00000439962 NKAPP1Q8N9T2 125 aa3.05□□□□□ -1.92
EDEM3-203ENST00000439962 IGLV5-48A0A075B6I7 105 aa3.05□□□□□ -1.92
EDEM3-203ENST00000439962 ERC2-IT1O76042 136 aa3.05□□□□□ -1.92
EDEM3-203ENST00000439962 TRAV7A0A075B6U4 112 aa3.04□□□□□ -1.92
EDEM3-203ENST00000439962 Q6ZVQ6 151 aa3.04□□□□□ -1.92
EDEM3-203ENST00000439962 RPL37AP8A6NKH3 93 aa3.04□□□□□ -1.92
EDEM3-203ENST00000439962 KRTAP4-16G5E9R7 235 aaPredicted RBP3.04□□□□□ -1.92
EDEM3-203ENST00000439962 LINC01547P58512 204 aaPredicted RBP3.04□□□□□ -1.92
EDEM3-203ENST00000439962 C14orf177Q52M58 125 aa3.04□□□□□ -1.92
EDEM3-203ENST00000439962 Q6ZRP5 223 aa3.04□□□□□ -1.92
EDEM3-203ENST00000439962 LRP1Q07954 4544 aaKnown RBP3.04□□□□□ -1.92
EDEM3-203ENST00000439962 IGKV3D-7A0A0C4DH55 119 aa3.03□□□□□ -1.92
EDEM3-203ENST00000439962 Q6ZRX8 168 aa3.03□□□□□ -1.92
EDEM3-203ENST00000439962 XAGE1AQ9HD64 81 aa3.03□□□□□ -1.92
EDEM3-203ENST00000439962 SS18L2Q9UHA2 77 aa3.03□□□□□ -1.92
EDEM3-203ENST00000439962 IGLV1-50A0A075B6I6 118 aa3.03□□□□□ -1.92
EDEM3-203ENST00000439962 NDUFC1O43677 76 aa3.03□□□□□ -1.92
EDEM3-203ENST00000439962 CNBPP62633 177 aaKnown RBP3.03□□□□□ -1.92
EDEM3-203ENST00000439962 PANO1I0J062 215 aa3.02□□□□□ -1.93
EDEM3-203ENST00000439962 KRTAP4-8Q9BYQ9 185 aa3.02□□□□□ -1.93
EDEM3-203ENST00000439962 J3KT08 172 aa3.02□□□□□ -1.93
EDEM3-203ENST00000439962 ATP5EP56381 51 aaPredicted RBP3.02□□□□□ -1.93
EDEM3-203ENST00000439962 Q5VSD8 79 aa3.02□□□□□ -1.93
EDEM3-203ENST00000439962 SCXQ7RTU7 201 aa3.02□□□□□ -1.93
EDEM3-203ENST00000439962 C7orf33Q8WU49 177 aa3.02□□□□□ -1.93
EDEM3-203ENST00000439962 DNAH8Q96JB1 4490 aa3.02□□□□□ -1.93
EDEM3-203ENST00000439962 EPM2AB3EWF7 344 aa3.02□□□□□ -1.93
EDEM3-203ENST00000439962 KLKP1Q107X0 134 aa3.02□□□□□ -1.93
EDEM3-203ENST00000439962 H0Y9J4 135 aa3.01□□□□□ -1.93
EDEM3-203ENST00000439962 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.01□□□□□ -1.93
EDEM3-203ENST00000439962 IGLV8-61A0A075B6I0 122 aa3.01□□□□□ -1.93
EDEM3-203ENST00000439962 CIRBP-AS1Q8TBR5 109 aa3.01□□□□□ -1.93
EDEM3-203ENST00000439962 SPRR4Q96PI1 79 aa3.01□□□□□ -1.93
EDEM3-203ENST00000439962 ETDCA0A1B0GVM5 59 aa3□□□□□ -1.93
EDEM3-203ENST00000439962 MRPL55Q7Z7F7 128 aaKnown RBP3□□□□□ -1.93
EDEM3-203ENST00000439962 Q8N377 158 aa3□□□□□ -1.93
EDEM3-203ENST00000439962 A0A087WVE0 104 aa2.99□□□□□ -1.93
EDEM3-203ENST00000439962 SERTAD4-AS1Q5TG53 156 aa2.99□□□□□ -1.93
EDEM3-203ENST00000439962 FAT3Q8TDW7 4589 aa2.99□□□□□ -1.93
EDEM3-203ENST00000439962 NREPQ16612 68 aa2.99□□□□□ -1.93
EDEM3-203ENST00000439962 REG3GQ6UW15 175 aa2.99□□□□□ -1.93
EDEM3-203ENST00000439962 FAM19A1Q7Z5A9 133 aa2.99□□□□□ -1.93
EDEM3-203ENST00000439962 Q8NBF4 154 aa2.99□□□□□ -1.93
EDEM3-203ENST00000439962 FAM229AH3BQW9 127 aa2.98□□□□□ -1.93
EDEM3-203ENST00000439962 SPRR1BP22528 89 aa2.98□□□□□ -1.93
EDEM3-203ENST00000439962 LINC00474Q9P2X8 69 aa2.98□□□□□ -1.93
EDEM3-203ENST00000439962 CDK2AP2O75956 126 aa2.98□□□□□ -1.93
EDEM3-203ENST00000439962 Q8N1X5 172 aa2.98□□□□□ -1.93
EDEM3-203ENST00000439962 Q9BRP9 147 aa2.98□□□□□ -1.93
EDEM3-203ENST00000439962 A0A096LNI7 61 aa2.97□□□□□ -1.93
EDEM3-203ENST00000439962 BPY2O14599 106 aa2.97□□□□□ -1.93
EDEM3-203ENST00000439962 IGKV4-1P06312 121 aa2.97□□□□□ -1.93
EDEM3-203ENST00000439962 FAM168BA1KXE4 195 aa2.97□□□□□ -1.93
EDEM3-203ENST00000439962 F8WEM9 126 aa2.97□□□□□ -1.93
EDEM3-203ENST00000439962 RPL37AP61513 92 aaKnown RBP2.97□□□□□ -1.93
EDEM3-203ENST00000439962 C1orf137Q5JT78 98 aa2.96□□□□□ -1.94
EDEM3-203ENST00000439962 FAM19A5Q7Z5A7 132 aaPredicted RBP2.96□□□□□ -1.94
EDEM3-203ENST00000439962 KRTAP7-1Q8IUC3 87 aa2.96□□□□□ -1.94
EDEM3-203ENST00000439962 C9orf163Q8N9P6 203 aa2.96□□□□□ -1.94
EDEM3-203ENST00000439962 SERP1Q9Y6X1 66 aa2.96□□□□□ -1.94
EDEM3-203ENST00000439962 FAM236DA0A1B0GTK5 79 aa2.95□□□□□ -1.94
EDEM3-203ENST00000439962 J3QL48 77 aa2.95□□□□□ -1.94
EDEM3-203ENST00000439962 FAM236CP0DP71 79 aa2.95□□□□□ -1.94
EDEM3-203ENST00000439962 A0A1W2PNM2 257 aa2.95□□□□□ -1.94
EDEM3-203ENST00000439962 H7BZZ5 65 aa2.95□□□□□ -1.94
EDEM3-203ENST00000439962 OCR1Q9BZK8 76 aa2.95□□□□□ -1.94
EDEM3-203ENST00000439962 SMIM29Q86T20 159 aa2.94□□□□□ -1.94
EDEM3-203ENST00000439962 UBE2BP63146 152 aa2.94□□□□□ -1.94
EDEM3-203ENST00000439962 PHF5AQ7RTV0 110 aaKnown RBP2.94□□□□□ -1.94
EDEM3-203ENST00000439962 C20orf197Q8N268 126 aa2.94□□□□□ -1.94
EDEM3-203ENST00000439962 A0A1W2PNN7 141 aa2.94□□□□□ -1.94
EDEM3-203ENST00000439962 A0A0U1RQV1 116 aa2.93□□□□□ -1.94
EDEM3-203ENST00000439962 H3BPC8 53 aa2.93□□□□□ -1.94
EDEM3-203ENST00000439962 TMEM254Q8TBM7 123 aa2.93□□□□□ -1.94
EDEM3-203ENST00000439962 UBR4Q5T4S7 5183 aa2.92□□□□□ -1.94
EDEM3-203ENST00000439962 PLA2G1BP04054 148 aaKnown RBP2.92□□□□□ -1.94
EDEM3-203ENST00000439962 C5orf47Q569G3 176 aa2.92□□□□□ -1.94
EDEM3-203ENST00000439962 DEFB105AQ8NG35 78 aa2.92□□□□□ -1.94
EDEM3-203ENST00000439962 CYSTM1Q9H1C7 97 aa2.92□□□□□ -1.94
EDEM3-203ENST00000439962 Q6ZSA8 131 aa2.92□□□□□ -1.94
EDEM3-203ENST00000439962 SPACA4Q8TDM5 124 aa2.92□□□□□ -1.94
EDEM3-203ENST00000439962 ZNF706Q9Y5V0 76 aaPredicted RBP2.91□□□□□ -1.94
EDEM3-203ENST00000439962 NDUFB1O75438 58 aa2.91□□□□□ -1.94
EDEM3-203ENST00000439962 DSCR10P59022 87 aa2.91□□□□□ -1.94
EDEM3-203ENST00000439962 IGFL1Q6UW32 110 aa2.91□□□□□ -1.94
EDEM3-203ENST00000439962 KRTAP13-1Q8IUC0 172 aa2.91□□□□□ -1.94
EDEM3-203ENST00000439962 ST20-AS1Q8NBB2 130 aa2.91□□□□□ -1.94
EDEM3-203ENST00000439962 SMIM26A0A096LP01 95 aa2.9□□□□□ -1.94
EDEM3-203ENST00000439962 HCG22E2RYF7 251 aa2.9□□□□□ -1.94
EDEM3-203ENST00000439962 UBE2AP49459 152 aa2.9□□□□□ -1.95
EDEM3-203ENST00000439962 LINC00483Q53H64 154 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms