RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 F8WEM9 126 aa4.22□□□□□ -1.73
VPS50-204ENST00000438395 NHP2Q9NX24 153 aaKnown RBP4.22□□□□□ -1.73
VPS50-204ENST00000438395 A4D1N5 150 aa4.21□□□□□ -1.74
VPS50-204ENST00000438395 COLCA2A8K830 154 aa4.21□□□□□ -1.74
VPS50-204ENST00000438395 M0R2T5 61 aa4.21□□□□□ -1.74
VPS50-204ENST00000438395 TCL1BO95988 128 aa4.21□□□□□ -1.74
VPS50-204ENST00000438395 KRTDAPP60985 99 aa4.21□□□□□ -1.74
VPS50-204ENST00000438395 HIST1H2BKO60814 126 aa4.2□□□□□ -1.74
VPS50-204ENST00000438395 HIST1H2BJP06899 126 aa4.2□□□□□ -1.74
VPS50-204ENST00000438395 IFITM1P13164 125 aa4.2□□□□□ -1.74
VPS50-204ENST00000438395 HIST1H2BOP23527 126 aa4.2□□□□□ -1.74
VPS50-204ENST00000438395 HIST1H2BBP33778 126 aa4.2□□□□□ -1.74
VPS50-204ENST00000438395 HIST1H2BDP58876 126 aa4.2□□□□□ -1.74
VPS50-204ENST00000438395 HIST1H2BCP62807 126 aa4.2□□□□□ -1.74
VPS50-204ENST00000438395 HIST2H2BEQ16778 126 aa4.2□□□□□ -1.74
VPS50-204ENST00000438395 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.2□□□□□ -1.74
VPS50-204ENST00000438395 HIST1H2BHQ93079 126 aa4.2□□□□□ -1.74
VPS50-204ENST00000438395 HIST1H2BNQ99877 126 aa4.2□□□□□ -1.74
VPS50-204ENST00000438395 HIST1H2BMQ99879 126 aa4.2□□□□□ -1.74
VPS50-204ENST00000438395 TTTY13Q9BZ97 58 aa4.2□□□□□ -1.74
VPS50-204ENST00000438395 CRCT1Q9UGL9 99 aa4.2□□□□□ -1.74
VPS50-204ENST00000438395 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
VPS50-204ENST00000438395 Q5XG85 94 aa4.19□□□□□ -1.74
VPS50-204ENST00000438395 Q6ZVH6 145 aa4.19□□□□□ -1.74
VPS50-204ENST00000438395 IGLV5-48A0A075B6I7 105 aa4.18□□□□□ -1.74
VPS50-204ENST00000438395 TRAV13-2A0A0B4J235 113 aa4.18□□□□□ -1.74
VPS50-204ENST00000438395 C3orf79P0CE67 100 aa4.18□□□□□ -1.74
VPS50-204ENST00000438395 MT1HP80294 61 aa4.18□□□□□ -1.74
VPS50-204ENST00000438395 VAMP3Q15836 100 aa4.18□□□□□ -1.74
VPS50-204ENST00000438395 C1orf195Q5TG92 126 aa4.18□□□□□ -1.74
VPS50-204ENST00000438395 SLC7A5P1Q8MH63 180 aa4.18□□□□□ -1.74
VPS50-204ENST00000438395 RPL37P61927 97 aaKnown RBP4.17□□□□□ -1.74
VPS50-204ENST00000438395 SMIM29Q86T20 159 aa4.17□□□□□ -1.74
VPS50-204ENST00000438395 A0A0G2JQZ4 141 aa4.15□□□□□ -1.75
VPS50-204ENST00000438395 Q6JHZ5 121 aa4.15□□□□□ -1.75
VPS50-204ENST00000438395 MUSTN1Q8IVN3 82 aa4.15□□□□□ -1.75
VPS50-204ENST00000438395 ATOH7Q8N100 152 aa4.15□□□□□ -1.75
VPS50-204ENST00000438395 SMIM11BQ8TCY0 68 aa4.15□□□□□ -1.75
VPS50-204ENST00000438395 KRTAP19-2Q3LHN2 52 aa4.14□□□□□ -1.75
VPS50-204ENST00000438395 PCP2Q8IVA1 136 aa4.14□□□□□ -1.75
VPS50-204ENST00000438395 HSBP1L1C9JCN9 74 aa4.13□□□□□ -1.75
VPS50-204ENST00000438395 SNRPEP62304 92 aaKnown RBP4.13□□□□□ -1.75
VPS50-204ENST00000438395 ATP11AUNQ6ZP68 121 aa4.13□□□□□ -1.75
VPS50-204ENST00000438395 CLEC2BQ92478 149 aa4.13□□□□□ -1.75
VPS50-204ENST00000438395 hADV29S1A0JD25 119 aa4.12□□□□□ -1.75
VPS50-204ENST00000438395 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
VPS50-204ENST00000438395 COA6Q5JTJ3 125 aaKnown RBP4.12□□□□□ -1.75
VPS50-204ENST00000438395 Q6Q795 121 aa4.12□□□□□ -1.75
VPS50-204ENST00000438395 Q6ZQY7 126 aa4.12□□□□□ -1.75
VPS50-204ENST00000438395 TRBV7-7A0A0K0K1E9 115 aa4.11□□□□□ -1.75
VPS50-204ENST00000438395 LINC00575Q6W349 94 aa4.11□□□□□ -1.75
VPS50-204ENST00000438395 OBSCN-AS1Q96MR7 158 aa4.11□□□□□ -1.75
VPS50-204ENST00000438395 SNHG12Q9BXW3 62 aa4.11□□□□□ -1.75
VPS50-204ENST00000438395 SNCGO76070 127 aa4.1□□□□□ -1.75
VPS50-204ENST00000438395 SCGB1D1O95968 90 aa4.1□□□□□ -1.75
VPS50-204ENST00000438395 LST1O00453 97 aa4.09□□□□□ -1.75
VPS50-204ENST00000438395 S100A2P29034 98 aa4.09□□□□□ -1.75
VPS50-204ENST00000438395 OCIAD2Q56VL3 154 aa4.09□□□□□ -1.75
VPS50-204ENST00000438395 BVES-AS1Q5T3Y7 98 aa4.09□□□□□ -1.75
VPS50-204ENST00000438395 IGFL1Q6UW32 110 aa4.09□□□□□ -1.75
VPS50-204ENST00000438395 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.09□□□□□ -1.75
VPS50-204ENST00000438395 PPDPFLQ8WWR9 84 aa4.09□□□□□ -1.75
VPS50-204ENST00000438395 SS18L2Q9UHA2 77 aa4.09□□□□□ -1.75
VPS50-204ENST00000438395 C12orf57Q99622 126 aa4.08□□□□□ -1.76
VPS50-204ENST00000438395 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
VPS50-204ENST00000438395 Q75L30 129 aa4.07□□□□□ -1.76
VPS50-204ENST00000438395 HIST1H4GQ99525 98 aa4.07□□□□□ -1.76
VPS50-204ENST00000438395 H3BUT2 72 aa4.06□□□□□ -1.76
VPS50-204ENST00000438395 Q96NJ1 140 aa4.06□□□□□ -1.76
VPS50-204ENST00000438395 TRBV20-1A0A075B6N2 111 aa4.05□□□□□ -1.76
VPS50-204ENST00000438395 IGKV2D-30A0A075B6S6 120 aa4.05□□□□□ -1.76
VPS50-204ENST00000438395 RAB37Q96AX2 223 aa4.04□□□□□ -1.76
VPS50-204ENST00000438395 S100A6P06703 90 aa4.03□□□□□ -1.76
VPS50-204ENST00000438395 HIST1H2BLQ99880 126 aa4.03□□□□□ -1.76
VPS50-204ENST00000438395 FLGP20930 4061 aaPredicted RBP4.02□□□□□ -1.77
VPS50-204ENST00000438395 CFC1P0CG37 223 aa4.02□□□□□ -1.77
VPS50-204ENST00000438395 TEN1Q86WV5 123 aa4.02□□□□□ -1.77
VPS50-204ENST00000438395 HIST3H2BBQ8N257 126 aa4.02□□□□□ -1.77
VPS50-204ENST00000438395 SIGMAR1Q99720 223 aa4.02□□□□□ -1.77
VPS50-204ENST00000438395 A0A087WSZ3 146 aa4.01□□□□□ -1.77
VPS50-204ENST00000438395 FAM236DA0A1B0GTK5 79 aa4.01□□□□□ -1.77
VPS50-204ENST00000438395 H0YGX0 51 aa4.01□□□□□ -1.77
VPS50-204ENST00000438395 FAM236CP0DP71 79 aa4.01□□□□□ -1.77
VPS50-204ENST00000438395 FABP2P12104 132 aa4□□□□□ -1.77
VPS50-204ENST00000438395 NDUFV3P56181 108 aaKnown RBP4□□□□□ -1.77
VPS50-204ENST00000438395 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
VPS50-204ENST00000438395 C20orf166-AS1Q96NR2 134 aa4□□□□□ -1.77
VPS50-204ENST00000438395 H3BMG7 143 aa3.99□□□□□ -1.77
VPS50-204ENST00000438395 COX8AP10176 69 aa3.99□□□□□ -1.77
VPS50-204ENST00000438395 A8MUU9 505 aa3.98□□□□□ -1.77
VPS50-204ENST00000438395 DSCR10P59022 87 aa3.98□□□□□ -1.77
VPS50-204ENST00000438395 A0A0B4J2C4 111 aa3.97□□□□□ -1.77
VPS50-204ENST00000438395 DNAL4O96015 105 aa3.97□□□□□ -1.77
VPS50-204ENST00000438395 S100A1P23297 94 aa3.97□□□□□ -1.77
VPS50-204ENST00000438395 A0A1B0GX51 115 aa3.96□□□□□ -1.78
VPS50-204ENST00000438395 DLEU1O43261 78 aa3.96□□□□□ -1.78
VPS50-204ENST00000438395 RBM12B-AS1Q9P1G2 102 aa3.96□□□□□ -1.78
VPS50-204ENST00000438395 A0A1B0GV72 72 aa3.95□□□□□ -1.78
VPS50-204ENST00000438395 IGKV4-1P06312 121 aa3.95□□□□□ -1.78
VPS50-204ENST00000438395 LINC00313P59037 77 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms