RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 COPS9Q8WXC6 57 aa7.67□□□□□ -1.18
TNFRSF1A-203ENST00000437813 KRTAP10-6P60371 365 aaPredicted RBP7.66□□□□□ -1.18
TNFRSF1A-203ENST00000437813 CFC1BP0CG36 223 aa7.65□□□□□ -1.18
TNFRSF1A-203ENST00000437813 C20orf202A1L168 122 aa7.64□□□□□ -1.19
TNFRSF1A-203ENST00000437813 TRAV13-2A0A0B4J235 113 aa7.63□□□□□ -1.19
TNFRSF1A-203ENST00000437813 FLGP20930 4061 aaPredicted RBP7.62□□□□□ -1.19
TNFRSF1A-203ENST00000437813 LINC00575Q6W349 94 aa7.62□□□□□ -1.19
TNFRSF1A-203ENST00000437813 NHP2Q9NX24 153 aaKnown RBP7.62□□□□□ -1.19
TNFRSF1A-203ENST00000437813 SNRPEP62304 92 aaKnown RBP7.59□□□□□ -1.19
TNFRSF1A-203ENST00000437813 TCL1BO95988 128 aa7.57□□□□□ -1.2
TNFRSF1A-203ENST00000437813 Q6ZQY7 126 aa7.57□□□□□ -1.2
TNFRSF1A-203ENST00000437813 IGFL1Q6UW32 110 aa7.56□□□□□ -1.2
TNFRSF1A-203ENST00000437813 TRBV7-7A0A0K0K1E9 115 aa7.55□□□□□ -1.2
TNFRSF1A-203ENST00000437813 Q6JHZ5 121 aa7.55□□□□□ -1.2
TNFRSF1A-203ENST00000437813 HIST3H2BBQ8N257 126 aa7.55□□□□□ -1.2
TNFRSF1A-203ENST00000437813 CLEC2BQ92478 149 aa7.55□□□□□ -1.2
TNFRSF1A-203ENST00000437813 HIST1H2BLQ99880 126 aa7.55□□□□□ -1.2
TNFRSF1A-203ENST00000437813 hADV29S1A0JD25 119 aa7.54□□□□□ -1.2
TNFRSF1A-203ENST00000437813 F8WEM9 126 aa7.53□□□□□ -1.2
TNFRSF1A-203ENST00000437813 VAMP3Q15836 100 aa7.53□□□□□ -1.2
TNFRSF1A-203ENST00000437813 OCIAD2Q56VL3 154 aa7.53□□□□□ -1.2
TNFRSF1A-203ENST00000437813 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.5□□□□□ -1.21
TNFRSF1A-203ENST00000437813 Q75L30 129 aa7.5□□□□□ -1.21
TNFRSF1A-203ENST00000437813 PPDPFLQ8WWR9 84 aa7.49□□□□□ -1.21
TNFRSF1A-203ENST00000437813 COX6B2Q6YFQ2 88 aa7.48□□□□□ -1.21
TNFRSF1A-203ENST00000437813 M0R2T5 61 aa7.47□□□□□ -1.21
TNFRSF1A-203ENST00000437813 OBSCN-AS1Q96MR7 158 aa7.47□□□□□ -1.21
TNFRSF1A-203ENST00000437813 BVES-AS1Q5T3Y7 98 aa7.45□□□□□ -1.22
TNFRSF1A-203ENST00000437813 C12orf57Q99622 126 aa7.45□□□□□ -1.22
TNFRSF1A-203ENST00000437813 HSBP1L1C9JCN9 74 aa7.44□□□□□ -1.22
TNFRSF1A-203ENST00000437813 H3BUT2 72 aa7.44□□□□□ -1.22
TNFRSF1A-203ENST00000437813 Q6Q795 121 aa7.44□□□□□ -1.22
TNFRSF1A-203ENST00000437813 COX8AP10176 69 aa7.42□□□□□ -1.22
TNFRSF1A-203ENST00000437813 S100A2P29034 98 aa7.42□□□□□ -1.22
TNFRSF1A-203ENST00000437813 C20orf166-AS1Q96NR2 134 aa7.42□□□□□ -1.22
TNFRSF1A-203ENST00000437813 DLEU1O43261 78 aa7.41□□□□□ -1.22
TNFRSF1A-203ENST00000437813 SCGB1D1O95968 90 aa7.41□□□□□ -1.22
TNFRSF1A-203ENST00000437813 CFC1P0CG37 223 aa7.41□□□□□ -1.22
TNFRSF1A-203ENST00000437813 ATP11AUNQ6ZP68 121 aa7.41□□□□□ -1.22
TNFRSF1A-203ENST00000437813 HIST1H4GQ99525 98 aa7.41□□□□□ -1.22
TNFRSF1A-203ENST00000437813 SNHG12Q9BXW3 62 aa7.41□□□□□ -1.22
TNFRSF1A-203ENST00000437813 LST1O00453 97 aa7.4□□□□□ -1.22
TNFRSF1A-203ENST00000437813 FAM218AQ96MZ4 157 aa7.4□□□□□ -1.22
TNFRSF1A-203ENST00000437813 Q96NJ1 140 aa7.4□□□□□ -1.22
TNFRSF1A-203ENST00000437813 A8MUU9 505 aa7.39□□□□□ -1.23
TNFRSF1A-203ENST00000437813 KRTAP9-8Q9BYQ0 159 aa7.38□□□□□ -1.23
TNFRSF1A-203ENST00000437813 TEN1Q86WV5 123 aa7.37□□□□□ -1.23
TNFRSF1A-203ENST00000437813 NDUFV3P56181 108 aaKnown RBP7.36□□□□□ -1.23
TNFRSF1A-203ENST00000437813 HIGD1BQ9P298 99 aa7.36□□□□□ -1.23
TNFRSF1A-203ENST00000437813 SS18L2Q9UHA2 77 aa7.36□□□□□ -1.23
TNFRSF1A-203ENST00000437813 A0A0B4J2C4 111 aa7.35□□□□□ -1.23
TNFRSF1A-203ENST00000437813 H0YGX0 51 aa7.34□□□□□ -1.23
TNFRSF1A-203ENST00000437813 C2orf91Q6ZV80 131 aa7.34□□□□□ -1.23
TNFRSF1A-203ENST00000437813 S100A6P06703 90 aa7.33□□□□□ -1.24
TNFRSF1A-203ENST00000437813 A0A087WSZ3 146 aa7.32□□□□□ -1.24
TNFRSF1A-203ENST00000437813 KRTAP16-1A8MUX0 517 aa7.32□□□□□ -1.24
TNFRSF1A-203ENST00000437813 C14orf144Q96I85 54 aa7.32□□□□□ -1.24
TNFRSF1A-203ENST00000437813 A0A1W2PNM2 257 aa7.31□□□□□ -1.24
TNFRSF1A-203ENST00000437813 KRTAP4-8Q9BYQ9 185 aa7.31□□□□□ -1.24
TNFRSF1A-203ENST00000437813 A0A1B0GX51 115 aa7.3□□□□□ -1.24
TNFRSF1A-203ENST00000437813 H3BS24 57 aa7.3□□□□□ -1.24
TNFRSF1A-203ENST00000437813 RAB37Q96AX2 223 aa7.3□□□□□ -1.24
TNFRSF1A-203ENST00000437813 TMA7Q9Y2S6 64 aaKnown RBP7.3□□□□□ -1.24
TNFRSF1A-203ENST00000437813 H3BMG7 143 aa7.29□□□□□ -1.24
TNFRSF1A-203ENST00000437813 USH2AO75445 5202 aa7.27□□□□□ -1.24
TNFRSF1A-203ENST00000437813 DSCR10P59022 87 aa7.27□□□□□ -1.25
TNFRSF1A-203ENST00000437813 SPATA45Q537H7 98 aa7.26□□□□□ -1.25
TNFRSF1A-203ENST00000437813 CEND1Q8N111 149 aa7.26□□□□□ -1.25
TNFRSF1A-203ENST00000437813 MPLKIPQ8TAP9 179 aa7.26□□□□□ -1.25
TNFRSF1A-203ENST00000437813 PAM16Q9Y3D7 125 aa7.26□□□□□ -1.25
TNFRSF1A-203ENST00000437813 LOC105371267A0A1B0GV96 52 aa7.25□□□□□ -1.25
TNFRSF1A-203ENST00000437813 SNCGO76070 127 aa7.25□□□□□ -1.25
TNFRSF1A-203ENST00000437813 FXYD2P54710 66 aa7.25□□□□□ -1.25
TNFRSF1A-203ENST00000437813 PRO1854Q9UHT4 67 aa7.25□□□□□ -1.25
TNFRSF1A-203ENST00000437813 SSPOA2VEC9 5147 aa7.24□□□□□ -1.25
TNFRSF1A-203ENST00000437813 TRIAP1O43715 76 aa7.24□□□□□ -1.25
TNFRSF1A-203ENST00000437813 MT2AP02795 61 aa7.23□□□□□ -1.25
TNFRSF1A-203ENST00000437813 NOTCH2NLQ7Z3S9 236 aa7.23□□□□□ -1.25
TNFRSF1A-203ENST00000437813 TRBV7-4A0A0J9YYF1 115 aa7.22□□□□□ -1.25
TNFRSF1A-203ENST00000437813 FABP2P12104 132 aa7.22□□□□□ -1.25
TNFRSF1A-203ENST00000437813 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.21□□□□□ -1.26
TNFRSF1A-203ENST00000437813 HRES1P13985 223 aa7.21□□□□□ -1.26
TNFRSF1A-203ENST00000437813 VAMP8Q9BV40 100 aa7.21□□□□□ -1.26
TNFRSF1A-203ENST00000437813 LINC00472Q9H8W2 130 aa7.21□□□□□ -1.26
TNFRSF1A-203ENST00000437813 TRBV20-1A0A075B6N2 111 aa7.2□□□□□ -1.26
TNFRSF1A-203ENST00000437813 LINC00313P59037 77 aa7.2□□□□□ -1.26
TNFRSF1A-203ENST00000437813 SIGMAR1Q99720 223 aa7.2□□□□□ -1.26
TNFRSF1A-203ENST00000437813 MT1FP04733 61 aa7.18□□□□□ -1.26
TNFRSF1A-203ENST00000437813 IGKV4-1P06312 121 aa7.18□□□□□ -1.26
TNFRSF1A-203ENST00000437813 ANKRD29Q8N6D5 301 aa7.17□□□□□ -1.26
TNFRSF1A-203ENST00000437813 KRTAP9-3Q9BYQ3 159 aa7.16□□□□□ -1.26
TNFRSF1A-203ENST00000437813 KRTAP9-7A8MTY7 169 aa7.15□□□□□ -1.26
TNFRSF1A-203ENST00000437813 ORMDL1Q9P0S3 153 aa7.15□□□□□ -1.26
TNFRSF1A-203ENST00000437813 DEFB116Q30KQ4 102 aa7.14□□□□□ -1.27
TNFRSF1A-203ENST00000437813 FCGBPQ9Y6R7 5405 aaPredicted RBP7.13□□□□□ -1.27
TNFRSF1A-203ENST00000437813 H3BQ85 93 aa7.13□□□□□ -1.27
TNFRSF1A-203ENST00000437813 K7ERJ3 54 aa7.13□□□□□ -1.27
TNFRSF1A-203ENST00000437813 TMEM256-PLSCR3K7ERE1 68 aa7.12□□□□□ -1.27
TNFRSF1A-203ENST00000437813 CCKP06307 115 aa7.12□□□□□ -1.27
TNFRSF1A-203ENST00000437813 A0A1B0GV72 72 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms