RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 Q6JHZ5 121 aa7.42□□□□□ -1.22
HDAC8-213ENST00000436675 SMIM11BQ8TCY0 68 aa7.42□□□□□ -1.22
HDAC8-213ENST00000436675 SYS1-DBNDD2H3BUS1 97 aa7.41□□□□□ -1.22
HDAC8-213ENST00000436675 LST1O00453 97 aa7.4□□□□□ -1.22
HDAC8-213ENST00000436675 SCGB1D4Q6XE38 83 aa7.4□□□□□ -1.22
HDAC8-213ENST00000436675 C20orf166-AS1Q96NR2 134 aa7.4□□□□□ -1.22
HDAC8-213ENST00000436675 A8MUU9 505 aa7.39□□□□□ -1.23
HDAC8-213ENST00000436675 MUSTN1Q8IVN3 82 aa7.39□□□□□ -1.23
HDAC8-213ENST00000436675 OCIAD2Q56VL3 154 aa7.38□□□□□ -1.23
HDAC8-213ENST00000436675 Q6ZQY7 126 aa7.38□□□□□ -1.23
HDAC8-213ENST00000436675 TRAV13-2A0A0B4J235 113 aa7.37□□□□□ -1.23
HDAC8-213ENST00000436675 COPS9Q8WXC6 57 aa7.37□□□□□ -1.23
HDAC8-213ENST00000436675 LINC00846Q9NV44 126 aa7.37□□□□□ -1.23
HDAC8-213ENST00000436675 IFITM1P13164 125 aa7.36□□□□□ -1.23
HDAC8-213ENST00000436675 LINC01545Q5VT33 79 aa7.36□□□□□ -1.23
HDAC8-213ENST00000436675 LINC00575Q6W349 94 aa7.35□□□□□ -1.23
HDAC8-213ENST00000436675 KRTAP16-1A8MUX0 517 aa7.34□□□□□ -1.23
HDAC8-213ENST00000436675 VAMP3Q15836 100 aa7.34□□□□□ -1.23
HDAC8-213ENST00000436675 hADV29S1A0JD25 119 aa7.33□□□□□ -1.24
HDAC8-213ENST00000436675 H3BUT2 72 aa7.33□□□□□ -1.24
HDAC8-213ENST00000436675 DSCR10P59022 87 aa7.33□□□□□ -1.24
HDAC8-213ENST00000436675 KRTAP19-6Q3LI70 58 aa7.33□□□□□ -1.24
HDAC8-213ENST00000436675 PET117Q6UWS5 81 aa7.32□□□□□ -1.24
HDAC8-213ENST00000436675 RBM12B-AS1Q9P1G2 102 aa7.31□□□□□ -1.24
HDAC8-213ENST00000436675 ANKRD39Q53RE8 183 aa7.3□□□□□ -1.24
HDAC8-213ENST00000436675 Q6ZVH6 145 aa7.29□□□□□ -1.24
HDAC8-213ENST00000436675 SNHG12Q9BXW3 62 aa7.29□□□□□ -1.24
HDAC8-213ENST00000436675 C3orf79P0CE67 100 aa7.28□□□□□ -1.24
HDAC8-213ENST00000436675 HRES1P13985 223 aa7.28□□□□□ -1.24
HDAC8-213ENST00000436675 KRTAP6-3Q3LI67 103 aa7.28□□□□□ -1.24
HDAC8-213ENST00000436675 MPLKIPQ8TAP9 179 aa7.27□□□□□ -1.25
HDAC8-213ENST00000436675 SS18L2Q9UHA2 77 aa7.27□□□□□ -1.25
HDAC8-213ENST00000436675 COLCA2A8K830 154 aa7.26□□□□□ -1.25
HDAC8-213ENST00000436675 KRTDAPP60985 99 aa7.25□□□□□ -1.25
HDAC8-213ENST00000436675 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.25□□□□□ -1.25
HDAC8-213ENST00000436675 ATOH7Q8N100 152 aa7.25□□□□□ -1.25
HDAC8-213ENST00000436675 A0A087WSZ3 146 aa7.23□□□□□ -1.25
HDAC8-213ENST00000436675 SIGMAR1Q99720 223 aa7.23□□□□□ -1.25
HDAC8-213ENST00000436675 HIST1H2BKO60814 126 aa7.22□□□□□ -1.25
HDAC8-213ENST00000436675 SCGB1D1O95968 90 aa7.22□□□□□ -1.25
HDAC8-213ENST00000436675 HIST1H2BJP06899 126 aa7.22□□□□□ -1.25
HDAC8-213ENST00000436675 HIST1H2BOP23527 126 aa7.22□□□□□ -1.25
HDAC8-213ENST00000436675 HIST1H2BBP33778 126 aa7.22□□□□□ -1.25
HDAC8-213ENST00000436675 HIST1H2BDP58876 126 aa7.22□□□□□ -1.25
HDAC8-213ENST00000436675 HIST1H2BCP62807 126 aa7.22□□□□□ -1.25
HDAC8-213ENST00000436675 HIST2H2BEQ16778 126 aa7.22□□□□□ -1.25
HDAC8-213ENST00000436675 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.22□□□□□ -1.25
HDAC8-213ENST00000436675 HIST1H2BHQ93079 126 aa7.22□□□□□ -1.25
HDAC8-213ENST00000436675 HIST1H2BNQ99877 126 aa7.22□□□□□ -1.25
HDAC8-213ENST00000436675 HIST1H2BMQ99879 126 aa7.22□□□□□ -1.25
HDAC8-213ENST00000436675 NEBP20929 6669 aa7.22□□□□□ -1.25
HDAC8-213ENST00000436675 NOTCH2NLQ7Z3S9 236 aa7.21□□□□□ -1.26
HDAC8-213ENST00000436675 PPDPFLQ8WWR9 84 aa7.21□□□□□ -1.26
HDAC8-213ENST00000436675 LINC00313P59037 77 aa7.2□□□□□ -1.26
HDAC8-213ENST00000436675 TEN1Q86WV5 123 aa7.2□□□□□ -1.26
HDAC8-213ENST00000436675 C12orf57Q99622 126 aa7.16□□□□□ -1.26
HDAC8-213ENST00000436675 TMA7Q9Y2S6 64 aaKnown RBP7.16□□□□□ -1.26
HDAC8-213ENST00000436675 BVES-AS1Q5T3Y7 98 aa7.14□□□□□ -1.27
HDAC8-213ENST00000436675 Q8N9P0 234 aaPredicted RBP7.14□□□□□ -1.27
HDAC8-213ENST00000436675 IGKV4-1P06312 121 aa7.13□□□□□ -1.27
HDAC8-213ENST00000436675 NDUFV3P56181 108 aaKnown RBP7.13□□□□□ -1.27
HDAC8-213ENST00000436675 MTURNQ8N3F0 131 aa7.13□□□□□ -1.27
HDAC8-213ENST00000436675 DEFB116Q30KQ4 102 aa7.1□□□□□ -1.27
HDAC8-213ENST00000436675 A0A1W2PNM2 257 aa7.09□□□□□ -1.27
HDAC8-213ENST00000436675 H3BMG7 143 aa7.09□□□□□ -1.27
HDAC8-213ENST00000436675 A8MWP4 228 aa7.08□□□□□ -1.28
HDAC8-213ENST00000436675 IGHV6-1A0A0B4J1U7 121 aa7.07□□□□□ -1.28
HDAC8-213ENST00000436675 MUC12Q9UKN1 5478 aa7.06□□□□□ -1.28
HDAC8-213ENST00000436675 FABP2P12104 132 aa7.05□□□□□ -1.28
HDAC8-213ENST00000436675 FAM218AQ96MZ4 157 aa7.05□□□□□ -1.28
HDAC8-213ENST00000436675 SPINK7P58062 85 aa7.04□□□□□ -1.28
HDAC8-213ENST00000436675 A0A1B0GV72 72 aa7.03□□□□□ -1.28
HDAC8-213ENST00000436675 SNCGO76070 127 aa7.03□□□□□ -1.28
HDAC8-213ENST00000436675 SNRPEP62304 92 aaKnown RBP7.03□□□□□ -1.28
HDAC8-213ENST00000436675 COA6Q5JTJ3 125 aaKnown RBP7.03□□□□□ -1.28
HDAC8-213ENST00000436675 HIST1H4GQ99525 98 aa7.02□□□□□ -1.29
HDAC8-213ENST00000436675 KRTAP20-1Q3LI63 56 aa7□□□□□ -1.29
HDAC8-213ENST00000436675 ZCCHC13Q8WW36 166 aaKnown RBP7□□□□□ -1.29
HDAC8-213ENST00000436675 LINC00472Q9H8W2 130 aa6.99□□□□□ -1.29
HDAC8-213ENST00000436675 HSBP1L1C9JCN9 74 aa6.98□□□□□ -1.29
HDAC8-213ENST00000436675 H0YGX0 51 aa6.98□□□□□ -1.29
HDAC8-213ENST00000436675 WFDC13Q8IUB5 93 aa6.98□□□□□ -1.29
HDAC8-213ENST00000436675 ANKRD29Q8N6D5 301 aa6.98□□□□□ -1.29
HDAC8-213ENST00000436675 RAB37Q96AX2 223 aa6.97□□□□□ -1.29
HDAC8-213ENST00000436675 TRBV7-4A0A0J9YYF1 115 aa6.96□□□□□ -1.3
HDAC8-213ENST00000436675 A0A1B0GVX0 72 aa6.94□□□□□ -1.3
HDAC8-213ENST00000436675 C8orf87E5RJ46 101 aa6.93□□□□□ -1.3
HDAC8-213ENST00000436675 GHRHP01286 108 aa6.92□□□□□ -1.3
HDAC8-213ENST00000436675 TRACP01848 142 aa6.91□□□□□ -1.3
HDAC8-213ENST00000436675 CCKP06307 115 aa6.9□□□□□ -1.3
HDAC8-213ENST00000436675 A0A1B0GX51 115 aa6.88□□□□□ -1.31
HDAC8-213ENST00000436675 LYRM7Q5U5X0 104 aa6.88□□□□□ -1.31
HDAC8-213ENST00000436675 A0A0B4J2C4 111 aa6.87□□□□□ -1.31
HDAC8-213ENST00000436675 A6NN06 94 aa6.87□□□□□ -1.31
HDAC8-213ENST00000436675 VPS25Q9BRG1 176 aa6.87□□□□□ -1.31
HDAC8-213ENST00000436675 COX8AP10176 69 aa6.85□□□□□ -1.31
HDAC8-213ENST00000436675 HIST1H2BLQ99880 126 aa6.85□□□□□ -1.31
HDAC8-213ENST00000436675 ORMDL1Q9P0S3 153 aa6.84□□□□□ -1.31
HDAC8-213ENST00000436675 MDN1Q9NU22 5596 aa6.84□□□□□ -1.31
HDAC8-213ENST00000436675 S100A2P29034 98 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms