RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 DYNC1H1Q14204 4646 aaKnown RBP4.25□□□□□ -1.73
LSM3P3-201ENST00000436601 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.25□□□□□ -1.73
LSM3P3-201ENST00000436601 Q6ZQY7 126 aa4.25□□□□□ -1.73
LSM3P3-201ENST00000436601 GTF2H5Q6ZYL4 71 aa4.25□□□□□ -1.73
LSM3P3-201ENST00000436601 PRO0461Q9UI25 63 aa4.25□□□□□ -1.73
LSM3P3-201ENST00000436601 HECTD4Q9Y4D8 3996 aa4.25□□□□□ -1.73
LSM3P3-201ENST00000436601 C9JAW5 83 aa4.24□□□□□ -1.73
LSM3P3-201ENST00000436601 SNCGO76070 127 aa4.24□□□□□ -1.73
LSM3P3-201ENST00000436601 LINC01547P58512 204 aaPredicted RBP4.24□□□□□ -1.73
LSM3P3-201ENST00000436601 MTURNQ8N3F0 131 aa4.24□□□□□ -1.73
LSM3P3-201ENST00000436601 EPPK1P58107 5090 aaKnown RBP4.23□□□□□ -1.73
LSM3P3-201ENST00000436601 IGLV5-48A0A075B6I7 105 aa4.23□□□□□ -1.73
LSM3P3-201ENST00000436601 DNAL4O96015 105 aa4.23□□□□□ -1.73
LSM3P3-201ENST00000436601 BAALC-AS2P0C853 105 aa4.23□□□□□ -1.73
LSM3P3-201ENST00000436601 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
LSM3P3-201ENST00000436601 Q8N377 158 aa4.23□□□□□ -1.73
LSM3P3-201ENST00000436601 DEFB105AQ8NG35 78 aa4.23□□□□□ -1.73
LSM3P3-201ENST00000436601 LINC01600Q96MT4 127 aa4.22□□□□□ -1.73
LSM3P3-201ENST00000436601 SPRR4Q96PI1 79 aa4.22□□□□□ -1.73
LSM3P3-201ENST00000436601 ORMDL1Q9P0S3 153 aa4.22□□□□□ -1.73
LSM3P3-201ENST00000436601 LRP1BQ9NZR2 4599 aa4.22□□□□□ -1.73
LSM3P3-201ENST00000436601 DNAH8Q96JB1 4490 aa4.21□□□□□ -1.74
LSM3P3-201ENST00000436601 TEX49A0A1B0GTD5 131 aa4.21□□□□□ -1.74
LSM3P3-201ENST00000436601 F8W1H4 67 aa4.21□□□□□ -1.74
LSM3P3-201ENST00000436601 SPRR1BP22528 89 aa4.21□□□□□ -1.74
LSM3P3-201ENST00000436601 OCIAD2Q56VL3 154 aa4.21□□□□□ -1.74
LSM3P3-201ENST00000436601 Q5VSD8 79 aa4.21□□□□□ -1.74
LSM3P3-201ENST00000436601 SPINK6Q6UWN8 80 aa4.21□□□□□ -1.74
LSM3P3-201ENST00000436601 Q6ZVQ6 151 aa4.21□□□□□ -1.74
LSM3P3-201ENST00000436601 SMIM29Q86T20 159 aa4.21□□□□□ -1.74
LSM3P3-201ENST00000436601 ANKRD29Q8N6D5 301 aa4.21□□□□□ -1.74
LSM3P3-201ENST00000436601 PKHD1P08F94 4074 aa4.21□□□□□ -1.74
LSM3P3-201ENST00000436601 H3BT86 120 aa4.2□□□□□ -1.74
LSM3P3-201ENST00000436601 TMEM256-PLSCR3K7ERE1 68 aa4.2□□□□□ -1.74
LSM3P3-201ENST00000436601 LINC00483Q53H64 154 aa4.2□□□□□ -1.74
LSM3P3-201ENST00000436601 PPDPFLQ8WWR9 84 aa4.2□□□□□ -1.74
LSM3P3-201ENST00000436601 ANAPC11Q9NYG5 84 aa4.2□□□□□ -1.74
LSM3P3-201ENST00000436601 H3BQ85 93 aa4.19□□□□□ -1.74
LSM3P3-201ENST00000436601 KRTAP1-4P0C5Y4 121 aa4.19□□□□□ -1.74
LSM3P3-201ENST00000436601 C3orf22Q8N5N4 141 aa4.19□□□□□ -1.74
LSM3P3-201ENST00000436601 ZNF706Q9Y5V0 76 aaPredicted RBP4.19□□□□□ -1.74
LSM3P3-201ENST00000436601 NDUFV3P56181 108 aaKnown RBP4.18□□□□□ -1.74
LSM3P3-201ENST00000436601 Q8N9P0 234 aaPredicted RBP4.18□□□□□ -1.74
LSM3P3-201ENST00000436601 APOBP04114 4563 aaKnown RBP4.18□□□□□ -1.74
LSM3P3-201ENST00000436601 KIAA1109Q2LD37 5005 aa4.17□□□□□ -1.74
LSM3P3-201ENST00000436601 LCE1DQ5T752 114 aa4.17□□□□□ -1.74
LSM3P3-201ENST00000436601 OBSCN-AS1Q96MR7 158 aa4.17□□□□□ -1.74
LSM3P3-201ENST00000436601 RYR1P21817 5038 aa4.16□□□□□ -1.74
LSM3P3-201ENST00000436601 A0A1B0GV72 72 aa4.16□□□□□ -1.74
LSM3P3-201ENST00000436601 ETDBQ3ZM63 59 aa4.16□□□□□ -1.74
LSM3P3-201ENST00000436601 KRTAP4-5Q9BYR2 181 aa4.16□□□□□ -1.74
LSM3P3-201ENST00000436601 LAMTOR3Q9UHA4 124 aa4.16□□□□□ -1.74
LSM3P3-201ENST00000436601 IGLV8-61A0A075B6I0 122 aa4.15□□□□□ -1.75
LSM3P3-201ENST00000436601 A0A087X002 238 aa4.15□□□□□ -1.75
LSM3P3-201ENST00000436601 FAM229BQ4G0N7 80 aa4.15□□□□□ -1.75
LSM3P3-201ENST00000436601 TEN1Q86WV5 123 aa4.15□□□□□ -1.75
LSM3P3-201ENST00000436601 A0A0G2JQZ4 141 aa4.14□□□□□ -1.75
LSM3P3-201ENST00000436601 JMJD7-PLA2G4BH0Y9G9 81 aa4.14□□□□□ -1.75
LSM3P3-201ENST00000436601 RBM3P98179 157 aaKnown RBP4.14□□□□□ -1.75
LSM3P3-201ENST00000436601 KRTAP13-2Q52LG2 175 aa4.14□□□□□ -1.75
LSM3P3-201ENST00000436601 BIRC6Q9NR09 4857 aa4.14□□□□□ -1.75
LSM3P3-201ENST00000436601 IGKV2D-30A0A075B6S6 120 aa4.13□□□□□ -1.75
LSM3P3-201ENST00000436601 TRBV7-4A0A0J9YYF1 115 aa4.13□□□□□ -1.75
LSM3P3-201ENST00000436601 F8WEM9 126 aa4.13□□□□□ -1.75
LSM3P3-201ENST00000436601 CRYGAP11844 174 aa4.13□□□□□ -1.75
LSM3P3-201ENST00000436601 MOBPQ13875 183 aa4.13□□□□□ -1.75
LSM3P3-201ENST00000436601 PRAC1Q96KF2 57 aa4.13□□□□□ -1.75
LSM3P3-201ENST00000436601 C14orf132Q9NPU4 83 aa4.13□□□□□ -1.75
LSM3P3-201ENST00000436601 LOC110117498A0A087WWA1 95 aa4.12□□□□□ -1.75
LSM3P3-201ENST00000436601 KRTAP4-8A0A0G2JLE6 195 aa4.12□□□□□ -1.75
LSM3P3-201ENST00000436601 C9orf153Q5TBE3 101 aa4.12□□□□□ -1.75
LSM3P3-201ENST00000436601 IGFL1Q6UW32 110 aa4.12□□□□□ -1.75
LSM3P3-201ENST00000436601 Q6ZQT0 140 aa4.11□□□□□ -1.75
LSM3P3-201ENST00000436601 SSBP3-AS1Q7Z2R9 100 aa4.11□□□□□ -1.75
LSM3P3-201ENST00000436601 Q8NBF4 154 aa4.11□□□□□ -1.75
LSM3P3-201ENST00000436601 DSCR8Q96T75 97 aa4.11□□□□□ -1.75
LSM3P3-201ENST00000436601 HSPG2P98160 4391 aa4.1□□□□□ -1.75
LSM3P3-201ENST00000436601 A0A1W2PNM2 257 aa4.1□□□□□ -1.75
LSM3P3-201ENST00000436601 Q6JHZ5 121 aa4.1□□□□□ -1.75
LSM3P3-201ENST00000436601 FAT1Q14517 4588 aa4.09□□□□□ -1.75
LSM3P3-201ENST00000436601 SRRM2Q9UQ35 2752 aaKnown RBP4.09□□□□□ -1.75
LSM3P3-201ENST00000436601 CCKP06307 115 aa4.09□□□□□ -1.75
LSM3P3-201ENST00000436601 KRTAP10-8P60410 259 aa4.09□□□□□ -1.75
LSM3P3-201ENST00000436601 TYMSOSQ8TAI1 123 aa4.09□□□□□ -1.75
LSM3P3-201ENST00000436601 PDE6GP18545 87 aa4.08□□□□□ -1.76
LSM3P3-201ENST00000436601 MT1HL1P0DM35 61 aa4.07□□□□□ -1.76
LSM3P3-201ENST00000436601 Q6Q795 121 aa4.07□□□□□ -1.76
LSM3P3-201ENST00000436601 HRCT1Q6UXD1 115 aa4.07□□□□□ -1.76
LSM3P3-201ENST00000436601 HERC2O95714 4834 aa4.06□□□□□ -1.76
LSM3P3-201ENST00000436601 VPS25Q9BRG1 176 aa4.06□□□□□ -1.76
LSM3P3-201ENST00000436601 TRBV7-7A0A0K0K1E9 115 aa4.05□□□□□ -1.76
LSM3P3-201ENST00000436601 OXTP01178 125 aa4.05□□□□□ -1.76
LSM3P3-201ENST00000436601 CD164Q04900 197 aa4.05□□□□□ -1.76
LSM3P3-201ENST00000436601 VPS13BQ7Z7G8 4022 aa4.05□□□□□ -1.76
LSM3P3-201ENST00000436601 KRTAP29-1A8MX34 341 aaPredicted RBP4.04□□□□□ -1.76
LSM3P3-201ENST00000436601 LINC00304Q8N9R0 145 aa4.04□□□□□ -1.76
LSM3P3-201ENST00000436601 LINC00846Q9NV44 126 aa4.04□□□□□ -1.76
LSM3P3-201ENST00000436601 A0A087WSZ3 146 aa4.03□□□□□ -1.76
LSM3P3-201ENST00000436601 FAM240AA0A1B0GVK7 77 aa4.03□□□□□ -1.76
LSM3P3-201ENST00000436601 A0A1B0GW54 56 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms