RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 IGLV1-50A0A075B6I6 118 aa6.67□□□□□ -1.34
CLSTN1-203ENST00000435891 Q6ZRX8 168 aa6.67□□□□□ -1.34
CLSTN1-203ENST00000435891 KTN1-AS1Q86SY8 53 aa6.67□□□□□ -1.34
CLSTN1-203ENST00000435891 SRRM2Q9UQ35 2752 aaKnown RBP6.67□□□□□ -1.34
CLSTN1-203ENST00000435891 UBE2AP49459 152 aa6.66□□□□□ -1.34
CLSTN1-203ENST00000435891 DNAH7Q8WXX0 4024 aa6.66□□□□□ -1.34
CLSTN1-203ENST00000435891 HCG22E2RYF7 251 aa6.66□□□□□ -1.34
CLSTN1-203ENST00000435891 DEFB116Q30KQ4 102 aa6.66□□□□□ -1.34
CLSTN1-203ENST00000435891 C4orf48Q5BLP8 95 aa6.66□□□□□ -1.34
CLSTN1-203ENST00000435891 PLA2G2DQ9UNK4 145 aa6.66□□□□□ -1.34
CLSTN1-203ENST00000435891 KRTAP1-5Q9BYS1 174 aa6.65□□□□□ -1.34
CLSTN1-203ENST00000435891 SPRR1AP35321 89 aa6.65□□□□□ -1.34
CLSTN1-203ENST00000435891 IGLV5-48A0A075B6I7 105 aa6.64□□□□□ -1.35
CLSTN1-203ENST00000435891 IGLV5-37A0A075B6J1 123 aa6.64□□□□□ -1.35
CLSTN1-203ENST00000435891 ETDCA0A1B0GVM5 59 aa6.64□□□□□ -1.35
CLSTN1-203ENST00000435891 A0A1W2PNM2 257 aa6.63□□□□□ -1.35
CLSTN1-203ENST00000435891 PSCAO43653 123 aa6.63□□□□□ -1.35
CLSTN1-203ENST00000435891 DHRS4-AS1Q9P1J3 65 aa6.62□□□□□ -1.35
CLSTN1-203ENST00000435891 TNP2Q05952 138 aa6.62□□□□□ -1.35
CLSTN1-203ENST00000435891 WFDC13Q8IUB5 93 aa6.62□□□□□ -1.35
CLSTN1-203ENST00000435891 A0A0G2JQZ4 141 aa6.62□□□□□ -1.35
CLSTN1-203ENST00000435891 A0A1W2PNN7 141 aa6.62□□□□□ -1.35
CLSTN1-203ENST00000435891 MP68P56378 58 aa6.61□□□□□ -1.35
CLSTN1-203ENST00000435891 LINC00208Q96KT6 92 aa6.61□□□□□ -1.35
CLSTN1-203ENST00000435891 IGKV2-24A0A0C4DH68 120 aa6.6□□□□□ -1.35
CLSTN1-203ENST00000435891 C16orf90A8MZG2 172 aa6.6□□□□□ -1.35
CLSTN1-203ENST00000435891 C1orf137Q5JT78 98 aa6.6□□□□□ -1.35
CLSTN1-203ENST00000435891 PLECQ15149 4684 aaKnown RBP6.6□□□□□ -1.35
CLSTN1-203ENST00000435891 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.6□□□□□ -1.35
CLSTN1-203ENST00000435891 A0A096LNI7 61 aa6.59□□□□□ -1.35
CLSTN1-203ENST00000435891 Q5VV11 94 aa6.59□□□□□ -1.35
CLSTN1-203ENST00000435891 B9D2Q9BPU9 175 aa6.59□□□□□ -1.35
CLSTN1-203ENST00000435891 REG3GQ6UW15 175 aa6.58□□□□□ -1.36
CLSTN1-203ENST00000435891 NDUFS5O43920 106 aa6.57□□□□□ -1.36
CLSTN1-203ENST00000435891 PRLHP81277 87 aa6.57□□□□□ -1.36
CLSTN1-203ENST00000435891 Q8NBF4 154 aa6.56□□□□□ -1.36
CLSTN1-203ENST00000435891 NDUFB1O75438 58 aa6.56□□□□□ -1.36
CLSTN1-203ENST00000435891 KRTAP11-1Q8IUC1 163 aa6.56□□□□□ -1.36
CLSTN1-203ENST00000435891 CHTF8P0CG12 524 aa6.55□□□□□ -1.36
CLSTN1-203ENST00000435891 LIMD2Q9BT23 127 aa6.55□□□□□ -1.36
CLSTN1-203ENST00000435891 K7EQZ3 153 aa6.54□□□□□ -1.36
CLSTN1-203ENST00000435891 DYNC2H1Q8NCM8 4307 aaKnown RBP6.54□□□□□ -1.36
CLSTN1-203ENST00000435891 SPRR4Q96PI1 79 aa6.54□□□□□ -1.36
CLSTN1-203ENST00000435891 ATP11AUNQ6ZP68 121 aa6.54□□□□□ -1.36
CLSTN1-203ENST00000435891 LINC00476Q8WZB0 136 aa6.54□□□□□ -1.36
CLSTN1-203ENST00000435891 DSCR10P59022 87 aa6.53□□□□□ -1.36
CLSTN1-203ENST00000435891 H3BS24 57 aa6.52□□□□□ -1.37
CLSTN1-203ENST00000435891 CNBPP62633 177 aaKnown RBP6.52□□□□□ -1.37
CLSTN1-203ENST00000435891 PHF5AQ7RTV0 110 aaKnown RBP6.51□□□□□ -1.37
CLSTN1-203ENST00000435891 APLNQ9ULZ1 77 aa6.51□□□□□ -1.37
CLSTN1-203ENST00000435891 IGFL1Q6UW32 110 aa6.51□□□□□ -1.37
CLSTN1-203ENST00000435891 UBE2DNLQ8IWF7 75 aa6.51□□□□□ -1.37
CLSTN1-203ENST00000435891 Q8N9P0 234 aaPredicted RBP6.51□□□□□ -1.37
CLSTN1-203ENST00000435891 LCA10Q71F78 164 aa6.51□□□□□ -1.37
CLSTN1-203ENST00000435891 C7orf65Q6ZTY9 151 aa6.5□□□□□ -1.37
CLSTN1-203ENST00000435891 CYP4F30PQ9H0H9 118 aa6.5□□□□□ -1.37
CLSTN1-203ENST00000435891 SPAG11AQ6PDA7 123 aa6.49□□□□□ -1.37
CLSTN1-203ENST00000435891 STARD9Q9P2P6 4700 aa6.49□□□□□ -1.37
CLSTN1-203ENST00000435891 A0A1B0GW54 56 aa6.49□□□□□ -1.37
CLSTN1-203ENST00000435891 PANO1I0J062 215 aa6.48□□□□□ -1.37
CLSTN1-203ENST00000435891 H0Y9P7 68 aa6.47□□□□□ -1.37
CLSTN1-203ENST00000435891 C8orf87E5RJ46 101 aa6.47□□□□□ -1.37
CLSTN1-203ENST00000435891 MDFIQ99750 246 aa6.47□□□□□ -1.37
CLSTN1-203ENST00000435891 A0A087WSZ3 146 aa6.46□□□□□ -1.37
CLSTN1-203ENST00000435891 ZCCHC13Q8WW36 166 aaKnown RBP6.46□□□□□ -1.37
CLSTN1-203ENST00000435891 PRAC1Q96KF2 57 aa6.46□□□□□ -1.37
CLSTN1-203ENST00000435891 PCOTHQ58A44 107 aa6.46□□□□□ -1.38
CLSTN1-203ENST00000435891 PRKDCP78527 4128 aaKnown RBP6.46□□□□□ -1.38
CLSTN1-203ENST00000435891 RPL37AP61513 92 aaKnown RBP6.44□□□□□ -1.38
CLSTN1-203ENST00000435891 VPS13DQ5THJ4 4388 aa6.44□□□□□ -1.38
CLSTN1-203ENST00000435891 C9orf163Q8N9P6 203 aa6.44□□□□□ -1.38
CLSTN1-203ENST00000435891 LOC101927531A0A1B0GV80 90 aa6.43□□□□□ -1.38
CLSTN1-203ENST00000435891 COA5Q86WW8 74 aa6.43□□□□□ -1.38
CLSTN1-203ENST00000435891 IGLV8-61A0A075B6I0 122 aa6.43□□□□□ -1.38
CLSTN1-203ENST00000435891 A6NN06 94 aa6.43□□□□□ -1.38
CLSTN1-203ENST00000435891 KMT2AQ03164 3969 aa6.43□□□□□ -1.38
CLSTN1-203ENST00000435891 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
CLSTN1-203ENST00000435891 DNAH2Q9P225 4427 aa6.42□□□□□ -1.38
CLSTN1-203ENST00000435891 Q6ZRN7 208 aaPredicted RBP6.42□□□□□ -1.38
CLSTN1-203ENST00000435891 FRAS1Q86XX4 4008 aa6.42□□□□□ -1.38
CLSTN1-203ENST00000435891 NBDYA0A0U1RRE5 68 aa6.41□□□□□ -1.38
CLSTN1-203ENST00000435891 MOBPQ13875 183 aa6.41□□□□□ -1.38
CLSTN1-203ENST00000435891 C14orf177Q52M58 125 aa6.41□□□□□ -1.38
CLSTN1-203ENST00000435891 LCE6AA0A183 80 aa6.41□□□□□ -1.38
CLSTN1-203ENST00000435891 HECTD4Q9Y4D8 3996 aa6.4□□□□□ -1.38
CLSTN1-203ENST00000435891 Q75L30 129 aa6.4□□□□□ -1.39
CLSTN1-203ENST00000435891 CASC2Q6XLA1 102 aa6.39□□□□□ -1.39
CLSTN1-203ENST00000435891 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.39□□□□□ -1.39
CLSTN1-203ENST00000435891 DNAH8Q96JB1 4490 aa6.38□□□□□ -1.39
CLSTN1-203ENST00000435891 SPRR1BP22528 89 aa6.38□□□□□ -1.39
CLSTN1-203ENST00000435891 H0Y9J4 135 aa6.38□□□□□ -1.39
CLSTN1-203ENST00000435891 MEGF8Q7Z7M0 2845 aa6.37□□□□□ -1.39
CLSTN1-203ENST00000435891 SPINK7P58062 85 aa6.37□□□□□ -1.39
CLSTN1-203ENST00000435891 LINC00313P59037 77 aa6.37□□□□□ -1.39
CLSTN1-203ENST00000435891 TGP01266 2768 aa6.37□□□□□ -1.39
CLSTN1-203ENST00000435891 KRTAP13-1Q8IUC0 172 aa6.36□□□□□ -1.39
CLSTN1-203ENST00000435891 DNAH17Q9UFH2 4485 aa6.35□□□□□ -1.39
CLSTN1-203ENST00000435891 FBN3Q75N90 2809 aa6.35□□□□□ -1.39
CLSTN1-203ENST00000435891 LINC00472Q9H8W2 130 aa6.34□□□□□ -1.39
CLSTN1-203ENST00000435891 KRTAP29-1A8MX34 341 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms