RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 Q6ZRX8 168 aa8.61□□□□□ -1.03
RTN1-204ENST00000432103 FRAS1Q86XX4 4008 aa8.6□□□□□ -1.03
RTN1-204ENST00000432103 LINC00528Q8N1L1 170 aa8.6□□□□□ -1.03
RTN1-204ENST00000432103 KRTAP4-16G5E9R7 235 aaPredicted RBP8.6□□□□□ -1.03
RTN1-204ENST00000432103 CXCL6P80162 114 aa8.59□□□□□ -1.03
RTN1-204ENST00000432103 Q5XG85 94 aa8.59□□□□□ -1.03
RTN1-204ENST00000432103 CIRBP-AS1Q8TBR5 109 aa8.59□□□□□ -1.03
RTN1-204ENST00000432103 H0Y9J4 135 aa8.58□□□□□ -1.04
RTN1-204ENST00000432103 FAM30AQ9NZY2 134 aa8.58□□□□□ -1.04
RTN1-204ENST00000432103 FAM236DA0A1B0GTK5 79 aa8.57□□□□□ -1.04
RTN1-204ENST00000432103 FAM236CP0DP71 79 aa8.57□□□□□ -1.04
RTN1-204ENST00000432103 KLKP1Q107X0 134 aa8.57□□□□□ -1.04
RTN1-204ENST00000432103 SERP1Q9Y6X1 66 aa8.57□□□□□ -1.04
RTN1-204ENST00000432103 LINC01547P58512 204 aaPredicted RBP8.57□□□□□ -1.04
RTN1-204ENST00000432103 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.57□□□□□ -1.04
RTN1-204ENST00000432103 SCXQ7RTU7 201 aa8.57□□□□□ -1.04
RTN1-204ENST00000432103 C20orf197Q8N268 126 aa8.57□□□□□ -1.04
RTN1-204ENST00000432103 RYR2Q92736 4967 aa8.56□□□□□ -1.04
RTN1-204ENST00000432103 UBE2AP49459 152 aa8.56□□□□□ -1.04
RTN1-204ENST00000432103 H7BZZ5 65 aa8.55□□□□□ -1.04
RTN1-204ENST00000432103 Q6ZVQ6 151 aa8.55□□□□□ -1.04
RTN1-204ENST00000432103 LAMTOR3Q9UHA4 124 aa8.55□□□□□ -1.04
RTN1-204ENST00000432103 HECTD4Q9Y4D8 3996 aa8.55□□□□□ -1.04
RTN1-204ENST00000432103 FAT2Q9NYQ8 4349 aa8.53□□□□□ -1.04
RTN1-204ENST00000432103 NDUFC1O43677 76 aa8.53□□□□□ -1.04
RTN1-204ENST00000432103 C4orf26Q17RF5 130 aa8.53□□□□□ -1.04
RTN1-204ENST00000432103 Q6ZQY7 126 aa8.53□□□□□ -1.04
RTN1-204ENST00000432103 KRTAP11-1Q8IUC1 163 aa8.52□□□□□ -1.05
RTN1-204ENST00000432103 PSORS1C2Q9UIG4 136 aa8.52□□□□□ -1.05
RTN1-204ENST00000432103 Q9BRP9 147 aa8.51□□□□□ -1.05
RTN1-204ENST00000432103 PRLHP81277 87 aa8.51□□□□□ -1.05
RTN1-204ENST00000432103 C1orf137Q5JT78 98 aa8.51□□□□□ -1.05
RTN1-204ENST00000432103 TRBV7-4A0A0J9YYF1 115 aa8.5□□□□□ -1.05
RTN1-204ENST00000432103 ATP5EP56381 51 aaPredicted RBP8.5□□□□□ -1.05
RTN1-204ENST00000432103 HAMPP81172 84 aa8.5□□□□□ -1.05
RTN1-204ENST00000432103 HIGD2AQ9BW72 106 aa8.5□□□□□ -1.05
RTN1-204ENST00000432103 DNAH11Q96DT5 4516 aa8.49□□□□□ -1.05
RTN1-204ENST00000432103 PKD1P98161 4303 aa8.48□□□□□ -1.05
RTN1-204ENST00000432103 ERC2-IT1O76042 136 aa8.48□□□□□ -1.05
RTN1-204ENST00000432103 HRCT1Q6UXD1 115 aa8.48□□□□□ -1.05
RTN1-204ENST00000432103 ZNF861PO60384 105 aa8.47□□□□□ -1.05
RTN1-204ENST00000432103 KRTAP13-1Q8IUC0 172 aa8.47□□□□□ -1.05
RTN1-204ENST00000432103 SMIM26A0A096LP01 95 aa8.46□□□□□ -1.06
RTN1-204ENST00000432103 IGLV7-43P04211 117 aa8.45□□□□□ -1.06
RTN1-204ENST00000432103 ZNF706Q9Y5V0 76 aaPredicted RBP8.45□□□□□ -1.06
RTN1-204ENST00000432103 IGLV5-48A0A075B6I7 105 aa8.44□□□□□ -1.06
RTN1-204ENST00000432103 DEFB105AQ8NG35 78 aa8.44□□□□□ -1.06
RTN1-204ENST00000432103 DNAH5Q8TE73 4624 aa8.43□□□□□ -1.06
RTN1-204ENST00000432103 F8WEM9 126 aa8.42□□□□□ -1.06
RTN1-204ENST00000432103 Q8N377 158 aa8.41□□□□□ -1.06
RTN1-204ENST00000432103 ST20-AS1Q8NBB2 130 aa8.41□□□□□ -1.06
RTN1-204ENST00000432103 PRO0628Q9UI54 55 aa8.4□□□□□ -1.06
RTN1-204ENST00000432103 SNURFQ9Y675 71 aa8.4□□□□□ -1.06
RTN1-204ENST00000432103 RPL37AP61513 92 aaKnown RBP8.39□□□□□ -1.07
RTN1-204ENST00000432103 NREPQ16612 68 aa8.39□□□□□ -1.07
RTN1-204ENST00000432103 CDK2AP2O75956 126 aa8.39□□□□□ -1.07
RTN1-204ENST00000432103 SPRR1BP22528 89 aa8.38□□□□□ -1.07
RTN1-204ENST00000432103 EPPK1P58107 5090 aaKnown RBP8.38□□□□□ -1.07
RTN1-204ENST00000432103 BPY2O14599 106 aa8.38□□□□□ -1.07
RTN1-204ENST00000432103 TMEM254Q8TBM7 123 aa8.37□□□□□ -1.07
RTN1-204ENST00000432103 DNAH8Q96JB1 4490 aa8.37□□□□□ -1.07
RTN1-204ENST00000432103 A0A1B0GW54 56 aa8.36□□□□□ -1.07
RTN1-204ENST00000432103 FP248Q71RG6 208 aaPredicted RBP8.36□□□□□ -1.07
RTN1-204ENST00000432103 SPRR4Q96PI1 79 aa8.36□□□□□ -1.07
RTN1-204ENST00000432103 IGKV4-1P06312 121 aa8.34□□□□□ -1.07
RTN1-204ENST00000432103 LINC00483Q53H64 154 aa8.33□□□□□ -1.08
RTN1-204ENST00000432103 OCR1Q9BZK8 76 aa8.33□□□□□ -1.08
RTN1-204ENST00000432103 A0A0U1RQV1 116 aa8.33□□□□□ -1.08
RTN1-204ENST00000432103 FAM229AH3BQW9 127 aa8.33□□□□□ -1.08
RTN1-204ENST00000432103 SMR3BP02814 79 aaPredicted RBP8.33□□□□□ -1.08
RTN1-204ENST00000432103 PLA2G1BP04054 148 aaKnown RBP8.32□□□□□ -1.08
RTN1-204ENST00000432103 SPINK6Q6UWN8 80 aa8.32□□□□□ -1.08
RTN1-204ENST00000432103 SMIM29Q86T20 159 aa8.32□□□□□ -1.08
RTN1-204ENST00000432103 PKHD1P08F94 4074 aa8.31□□□□□ -1.08
RTN1-204ENST00000432103 BIRC6Q9NR09 4857 aa8.3□□□□□ -1.08
RTN1-204ENST00000432103 LRP1BQ9NZR2 4599 aa8.29□□□□□ -1.08
RTN1-204ENST00000432103 IGLV8-61A0A075B6I0 122 aa8.29□□□□□ -1.08
RTN1-204ENST00000432103 DYNC1H1Q14204 4646 aaKnown RBP8.28□□□□□ -1.08
RTN1-204ENST00000432103 FAM229BQ4G0N7 80 aa8.26□□□□□ -1.09
RTN1-204ENST00000432103 Q8NBF4 154 aa8.24□□□□□ -1.09
RTN1-204ENST00000432103 IGLV9-49A0A0B4J1Y8 123 aa8.23□□□□□ -1.09
RTN1-204ENST00000432103 Q8N9L7 120 aa8.23□□□□□ -1.09
RTN1-204ENST00000432103 KRTAP10-4P60372 401 aaPredicted RBP8.21□□□□□ -1.1
RTN1-204ENST00000432103 Q5VSD8 79 aa8.21□□□□□ -1.1
RTN1-204ENST00000432103 IGFL1Q6UW32 110 aa8.21□□□□□ -1.1
RTN1-204ENST00000432103 SSBP3-AS1Q7Z2R9 100 aa8.2□□□□□ -1.1
RTN1-204ENST00000432103 ANAPC11Q9NYG5 84 aa8.2□□□□□ -1.1
RTN1-204ENST00000432103 MOBPQ13875 183 aa8.19□□□□□ -1.1
RTN1-204ENST00000432103 APOBP04114 4563 aaKnown RBP8.18□□□□□ -1.1
RTN1-204ENST00000432103 A0A1W2PNM2 257 aa8.17□□□□□ -1.1
RTN1-204ENST00000432103 KRTAP1-4P0C5Y4 121 aa8.17□□□□□ -1.1
RTN1-204ENST00000432103 Q8N1X5 172 aa8.17□□□□□ -1.1
RTN1-204ENST00000432103 ZCCHC13Q8WW36 166 aaKnown RBP8.17□□□□□ -1.1
RTN1-204ENST00000432103 hDV103S1A0JD37 113 aa8.15□□□□□ -1.1
RTN1-204ENST00000432103 SRRM2Q9UQ35 2752 aaKnown RBP8.15□□□□□ -1.1
RTN1-204ENST00000432103 BRK1Q8WUW1 75 aa8.14□□□□□ -1.11
RTN1-204ENST00000432103 A0A087X002 238 aa8.13□□□□□ -1.11
RTN1-204ENST00000432103 CD164Q04900 197 aa8.13□□□□□ -1.11
RTN1-204ENST00000432103 Q1T7F1 81 aa8.12□□□□□ -1.11
RTN1-204ENST00000432103 TYMSOSQ8TAI1 123 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms