RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 A0A0B4J2C4 111 aa2.74□□□□□ -1.97
UBE4A-202ENST00000431736 TRRAPQ9Y4A5 3859 aa2.74□□□□□ -1.97
UBE4A-202ENST00000431736 COA6Q5JTJ3 125 aaKnown RBP2.73□□□□□ -1.97
UBE4A-202ENST00000431736 SMIM11BQ8TCY0 68 aa2.73□□□□□ -1.97
UBE4A-202ENST00000431736 NDUFV3P56181 108 aaKnown RBP2.73□□□□□ -1.97
UBE4A-202ENST00000431736 A0A1W2PPM0 123 aa2.73□□□□□ -1.97
UBE4A-202ENST00000431736 FXYD2P54710 66 aa2.73□□□□□ -1.97
UBE4A-202ENST00000431736 COL7A1Q02388 2944 aa2.73□□□□□ -1.97
UBE4A-202ENST00000431736 IGHV6-1A0A0B4J1U7 121 aa2.72□□□□□ -1.97
UBE4A-202ENST00000431736 RPS29P62273 56 aaKnown RBP2.72□□□□□ -1.97
UBE4A-202ENST00000431736 ETDBQ3ZM63 59 aa2.72□□□□□ -1.97
UBE4A-202ENST00000431736 A0A0A0MQY5 61 aa2.72□□□□□ -1.97
UBE4A-202ENST00000431736 KRTAP10-8P60410 259 aa2.72□□□□□ -1.97
UBE4A-202ENST00000431736 TPRXLQ17RH7 258 aa2.72□□□□□ -1.97
UBE4A-202ENST00000431736 F8W1H4 67 aa2.72□□□□□ -1.97
UBE4A-202ENST00000431736 H3BT86 120 aa2.72□□□□□ -1.97
UBE4A-202ENST00000431736 ACYP1P07311 99 aa2.72□□□□□ -1.97
UBE4A-202ENST00000431736 ZNF469Q96JG9 3925 aaPredicted RBP2.72□□□□□ -1.97
UBE4A-202ENST00000431736 LINC00313P59037 77 aa2.71□□□□□ -1.98
UBE4A-202ENST00000431736 Q6ZVQ6 151 aa2.71□□□□□ -1.98
UBE4A-202ENST00000431736 DNAH9Q9NYC9 4486 aa2.71□□□□□ -1.98
UBE4A-202ENST00000431736 ELOF1P60002 83 aaKnown RBP2.71□□□□□ -1.98
UBE4A-202ENST00000431736 TEN1Q86WV5 123 aa2.71□□□□□ -1.98
UBE4A-202ENST00000431736 WFDC13Q8IUB5 93 aa2.71□□□□□ -1.98
UBE4A-202ENST00000431736 A0A087WSZ3 146 aa2.71□□□□□ -1.98
UBE4A-202ENST00000431736 IGKV3D-7A0A0C4DH55 119 aa2.71□□□□□ -1.98
UBE4A-202ENST00000431736 K7EP34 96 aa2.7□□□□□ -1.98
UBE4A-202ENST00000431736 OBSCN-AS1Q96MR7 158 aa2.7□□□□□ -1.98
UBE4A-202ENST00000431736 FAM240AA0A1B0GVK7 77 aa2.7□□□□□ -1.98
UBE4A-202ENST00000431736 A0A087X002 238 aa2.69□□□□□ -1.98
UBE4A-202ENST00000431736 LINC01546A6NGU7 62 aa2.69□□□□□ -1.98
UBE4A-202ENST00000431736 C8orf87E5RJ46 101 aa2.69□□□□□ -1.98
UBE4A-202ENST00000431736 TRIAP1O43715 76 aa2.69□□□□□ -1.98
UBE4A-202ENST00000431736 HUWE1Q7Z6Z7 4374 aaKnown RBP2.69□□□□□ -1.98
UBE4A-202ENST00000431736 PCOTHQ58A44 107 aa2.69□□□□□ -1.98
UBE4A-202ENST00000431736 KRTAP3-3Q9BYR6 98 aa2.68□□□□□ -1.98
UBE4A-202ENST00000431736 KRTAP3-2Q9BYR7 98 aa2.68□□□□□ -1.98
UBE4A-202ENST00000431736 FAM236AA0A1B0GUQ0 79 aa2.68□□□□□ -1.98
UBE4A-202ENST00000431736 FAM236BA0A1B0GV22 79 aa2.68□□□□□ -1.98
UBE4A-202ENST00000431736 PMAIP1Q13794 54 aa2.68□□□□□ -1.98
UBE4A-202ENST00000431736 CUBNO60494 3623 aa2.68□□□□□ -1.98
UBE4A-202ENST00000431736 LINC00575Q6W349 94 aa2.67□□□□□ -1.98
UBE4A-202ENST00000431736 DYNC2H1Q8NCM8 4307 aaKnown RBP2.67□□□□□ -1.98
UBE4A-202ENST00000431736 TRBV7-7A0A0K0K1E9 115 aa2.67□□□□□ -1.98
UBE4A-202ENST00000431736 SPTSSBQ8NFR3 76 aa2.67□□□□□ -1.98
UBE4A-202ENST00000431736 PRKDCP78527 4128 aaKnown RBP2.66□□□□□ -1.98
UBE4A-202ENST00000431736 TSPEAR-AS2P59090 65 aa2.66□□□□□ -1.98
UBE4A-202ENST00000431736 ADAMTSL4-AS1Q5T5F5 129 aa2.66□□□□□ -1.98
UBE4A-202ENST00000431736 IMUPQ9GZP8 106 aa2.66□□□□□ -1.98
UBE4A-202ENST00000431736 CCDC179H3BU77 68 aa2.65□□□□□ -1.98
UBE4A-202ENST00000431736 RPS28P62857 69 aaKnown RBP2.65□□□□□ -1.98
UBE4A-202ENST00000431736 IGKV2D-30A0A075B6S6 120 aa2.65□□□□□ -1.98
UBE4A-202ENST00000431736 IGKV2-30P06310 120 aa2.65□□□□□ -1.98
UBE4A-202ENST00000431736 Q8N9L7 120 aa2.65□□□□□ -1.98
UBE4A-202ENST00000431736 DNAH1Q9P2D7 4330 aa2.65□□□□□ -1.99
UBE4A-202ENST00000431736 DEFB116Q30KQ4 102 aa2.65□□□□□ -1.99
UBE4A-202ENST00000431736 LINC00483Q53H64 154 aa2.65□□□□□ -1.99
UBE4A-202ENST00000431736 IGFL1Q6UW32 110 aa2.65□□□□□ -1.99
UBE4A-202ENST00000431736 ERC2-IT1O76042 136 aa2.64□□□□□ -1.99
UBE4A-202ENST00000431736 MT1HL1P0DM35 61 aa2.64□□□□□ -1.99
UBE4A-202ENST00000431736 hDV103S1A0JD37 113 aa2.64□□□□□ -1.99
UBE4A-202ENST00000431736 ATP5EP2Q5VTU8 51 aa2.64□□□□□ -1.99
UBE4A-202ENST00000431736 EIF4EBP3O60516 100 aaPredicted RBP2.64□□□□□ -1.99
UBE4A-202ENST00000431736 SERP1Q9Y6X1 66 aa2.64□□□□□ -1.99
UBE4A-202ENST00000431736 DNAH11Q96DT5 4516 aa2.63□□□□□ -1.99
UBE4A-202ENST00000431736 KRTAP1-4P0C5Y4 121 aa2.63□□□□□ -1.99
UBE4A-202ENST00000431736 SPRR1AP35321 89 aa2.63□□□□□ -1.99
UBE4A-202ENST00000431736 SMIM29Q86T20 159 aa2.63□□□□□ -1.99
UBE4A-202ENST00000431736 BRK1Q8WUW1 75 aa2.63□□□□□ -1.99
UBE4A-202ENST00000431736 K7ERS5 55 aa2.63□□□□□ -1.99
UBE4A-202ENST00000431736 KRTAP13-2Q52LG2 175 aa2.63□□□□□ -1.99
UBE4A-202ENST00000431736 URB1-AS1Q96HZ7 61 aa2.63□□□□□ -1.99
UBE4A-202ENST00000431736 DSCR10P59022 87 aa2.62□□□□□ -1.99
UBE4A-202ENST00000431736 ASB16-AS1Q495Z4 193 aa2.62□□□□□ -1.99
UBE4A-202ENST00000431736 LINC00643Q86TS7 51 aa2.62□□□□□ -1.99
UBE4A-202ENST00000431736 A0A096LNJ9 63 aa2.62□□□□□ -1.99
UBE4A-202ENST00000431736 ATOX1O00244 68 aa2.62□□□□□ -1.99
UBE4A-202ENST00000431736 SPRR1BP22528 89 aa2.62□□□□□ -1.99
UBE4A-202ENST00000431736 HCG22E2RYF7 251 aa2.62□□□□□ -1.99
UBE4A-202ENST00000431736 Q8N377 158 aa2.62□□□□□ -1.99
UBE4A-202ENST00000431736 LCE2DQ5TA82 110 aaPredicted RBP2.61□□□□□ -1.99
UBE4A-202ENST00000431736 CSMD3Q7Z407 3707 aa2.61□□□□□ -1.99
UBE4A-202ENST00000431736 RPL37P61927 97 aaKnown RBP2.6□□□□□ -1.99
UBE4A-202ENST00000431736 TAX1BP3O14907 124 aa2.6□□□□□ -1.99
UBE4A-202ENST00000431736 MT-ATP8P03928 68 aa2.6□□□□□ -1.99
UBE4A-202ENST00000431736 TMEM258P61165 79 aa2.6□□□□□ -1.99
UBE4A-202ENST00000431736 SOSTDC1Q6X4U4 206 aa2.6□□□□□ -1.99
UBE4A-202ENST00000431736 KRTAP11-1Q8IUC1 163 aa2.6□□□□□ -1.99
UBE4A-202ENST00000431736 YPEL4Q96NS1 127 aa2.59□□□□□ -1.99
UBE4A-202ENST00000431736 A0A1B0GW54 56 aa2.59□□□□□ -1.99
UBE4A-202ENST00000431736 LINC00208Q96KT6 92 aa2.59□□□□□ -2
UBE4A-202ENST00000431736 TRBV7-4A0A0J9YYF1 115 aa2.59□□□□□ -2
UBE4A-202ENST00000431736 KRTAP13-1Q8IUC0 172 aa2.59□□□□□ -2
UBE4A-202ENST00000431736 PLECQ15149 4684 aaKnown RBP2.58□□□□□ -2
UBE4A-202ENST00000431736 PRR15LQ9BU68 103 aa2.58□□□□□ -2
UBE4A-202ENST00000431736 C7orf65Q6ZTY9 151 aa2.58□□□□□ -2
UBE4A-202ENST00000431736 C2orf91Q6ZV80 131 aa2.58□□□□□ -2
UBE4A-202ENST00000431736 KRTAP10-4P60372 401 aaPredicted RBP2.58□□□□□ -2
UBE4A-202ENST00000431736 KRTAP13-3Q3SY46 172 aa2.58□□□□□ -2
UBE4A-202ENST00000431736 RYR2Q92736 4967 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms