RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 IFITM1P13164 125 aa11.11□□□□□ -0.63
PTPRA-207ENST00000431048 IGFL1Q6UW32 110 aa11.11□□□□□ -0.63
PTPRA-207ENST00000431048 TRAV13-2A0A0B4J235 113 aa11.08□□□□□ -0.64
PTPRA-207ENST00000431048 LINC01545Q5VT33 79 aa11.08□□□□□ -0.64
PTPRA-207ENST00000431048 KRTAP10-10P60014 251 aa11.07□□□□□ -0.64
PTPRA-207ENST00000431048 SMIM11BQ8TCY0 68 aa11.07□□□□□ -0.64
PTPRA-207ENST00000431048 LINC00846Q9NV44 126 aa11.07□□□□□ -0.64
PTPRA-207ENST00000431048 LST1O00453 97 aa11.06□□□□□ -0.64
PTPRA-207ENST00000431048 OCIAD2Q56VL3 154 aa11.06□□□□□ -0.64
PTPRA-207ENST00000431048 Q6ZVH6 145 aa11.06□□□□□ -0.64
PTPRA-207ENST00000431048 LINC00575Q6W349 94 aa11.03□□□□□ -0.64
PTPRA-207ENST00000431048 SCGB1D4Q6XE38 83 aa11.03□□□□□ -0.64
PTPRA-207ENST00000431048 PET117Q6UWS5 81 aa11.02□□□□□ -0.65
PTPRA-207ENST00000431048 MUSTN1Q8IVN3 82 aa11.02□□□□□ -0.65
PTPRA-207ENST00000431048 SLC7A5P1Q8MH63 180 aa11.02□□□□□ -0.65
PTPRA-207ENST00000431048 VAMP3Q15836 100 aa11.01□□□□□ -0.65
PTPRA-207ENST00000431048 KRTAP19-6Q3LI70 58 aa11□□□□□ -0.65
PTPRA-207ENST00000431048 Q6ZQY7 126 aa11□□□□□ -0.65
PTPRA-207ENST00000431048 FAM236DA0A1B0GTK5 79 aa10.98□□□□□ -0.65
PTPRA-207ENST00000431048 hADV29S1A0JD25 119 aa10.98□□□□□ -0.65
PTPRA-207ENST00000431048 FAM236CP0DP71 79 aa10.98□□□□□ -0.65
PTPRA-207ENST00000431048 MPLKIPQ8TAP9 179 aa10.96□□□□□ -0.65
PTPRA-207ENST00000431048 SS18L2Q9UHA2 77 aa10.94□□□□□ -0.66
PTPRA-207ENST00000431048 PPDPFLQ8WWR9 84 aa10.93□□□□□ -0.66
PTPRA-207ENST00000431048 KRTAP16-1A8MUX0 517 aa10.92□□□□□ -0.66
PTPRA-207ENST00000431048 COLCA2A8K830 154 aa10.91□□□□□ -0.66
PTPRA-207ENST00000431048 SCGB1D1O95968 90 aa10.91□□□□□ -0.66
PTPRA-207ENST00000431048 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.91□□□□□ -0.66
PTPRA-207ENST00000431048 RBM12B-AS1Q9P1G2 102 aa10.91□□□□□ -0.66
PTPRA-207ENST00000431048 KRTAP6-3Q3LI67 103 aa10.9□□□□□ -0.66
PTPRA-207ENST00000431048 C3orf79P0CE67 100 aa10.88□□□□□ -0.67
PTPRA-207ENST00000431048 HRES1P13985 223 aa10.88□□□□□ -0.67
PTPRA-207ENST00000431048 SNHG12Q9BXW3 62 aa10.88□□□□□ -0.67
PTPRA-207ENST00000431048 ANKRD39Q53RE8 183 aa10.87□□□□□ -0.67
PTPRA-207ENST00000431048 H3BUT2 72 aa10.85□□□□□ -0.67
PTPRA-207ENST00000431048 DSCR10P59022 87 aa10.84□□□□□ -0.67
PTPRA-207ENST00000431048 TEN1Q86WV5 123 aa10.83□□□□□ -0.68
PTPRA-207ENST00000431048 HIST1H2BKO60814 126 aa10.81□□□□□ -0.68
PTPRA-207ENST00000431048 HIST1H2BJP06899 126 aa10.81□□□□□ -0.68
PTPRA-207ENST00000431048 HIST1H2BOP23527 126 aa10.81□□□□□ -0.68
PTPRA-207ENST00000431048 HIST1H2BBP33778 126 aa10.81□□□□□ -0.68
PTPRA-207ENST00000431048 HIST1H2BDP58876 126 aa10.81□□□□□ -0.68
PTPRA-207ENST00000431048 HIST1H2BCP62807 126 aa10.81□□□□□ -0.68
PTPRA-207ENST00000431048 HIST2H2BEQ16778 126 aa10.81□□□□□ -0.68
PTPRA-207ENST00000431048 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.81□□□□□ -0.68
PTPRA-207ENST00000431048 HIST1H2BHQ93079 126 aa10.81□□□□□ -0.68
PTPRA-207ENST00000431048 HIST1H2BNQ99877 126 aa10.81□□□□□ -0.68
PTPRA-207ENST00000431048 HIST1H2BMQ99879 126 aa10.81□□□□□ -0.68
PTPRA-207ENST00000431048 NOTCH2NLQ7Z3S9 236 aa10.79□□□□□ -0.68
PTPRA-207ENST00000431048 KRTDAPP60985 99 aa10.77□□□□□ -0.69
PTPRA-207ENST00000431048 A0A087WSZ3 146 aa10.76□□□□□ -0.69
PTPRA-207ENST00000431048 LINC00313P59037 77 aa10.76□□□□□ -0.69
PTPRA-207ENST00000431048 BVES-AS1Q5T3Y7 98 aa10.74□□□□□ -0.69
PTPRA-207ENST00000431048 ATOH7Q8N100 152 aa10.71□□□□□ -0.69
PTPRA-207ENST00000431048 MTURNQ8N3F0 131 aa10.71□□□□□ -0.69
PTPRA-207ENST00000431048 C12orf57Q99622 126 aa10.69□□□□□ -0.7
PTPRA-207ENST00000431048 SIGMAR1Q99720 223 aa10.68□□□□□ -0.7
PTPRA-207ENST00000431048 NEBP20929 6669 aa10.68□□□□□ -0.7
PTPRA-207ENST00000431048 NDUFV3P56181 108 aaKnown RBP10.67□□□□□ -0.7
PTPRA-207ENST00000431048 SNRPEP62304 92 aaKnown RBP10.67□□□□□ -0.7
PTPRA-207ENST00000431048 COA6Q5JTJ3 125 aaKnown RBP10.66□□□□□ -0.7
PTPRA-207ENST00000431048 A8MWP4 228 aa10.63□□□□□ -0.71
PTPRA-207ENST00000431048 IGKV4-1P06312 121 aa10.61□□□□□ -0.71
PTPRA-207ENST00000431048 SNCGO76070 127 aa10.6□□□□□ -0.71
PTPRA-207ENST00000431048 H3BMG7 143 aa10.59□□□□□ -0.71
PTPRA-207ENST00000431048 A0A1W2PNM2 257 aa10.58□□□□□ -0.72
PTPRA-207ENST00000431048 H0YGX0 51 aa10.55□□□□□ -0.72
PTPRA-207ENST00000431048 GHRHP01286 108 aa10.52□□□□□ -0.73
PTPRA-207ENST00000431048 Q8N9P0 234 aaPredicted RBP10.52□□□□□ -0.73
PTPRA-207ENST00000431048 MUC12Q9UKN1 5478 aa10.51□□□□□ -0.73
PTPRA-207ENST00000431048 TRBV7-4A0A0J9YYF1 115 aa10.5□□□□□ -0.73
PTPRA-207ENST00000431048 SPINK7P58062 85 aa10.5□□□□□ -0.73
PTPRA-207ENST00000431048 FAM218AQ96MZ4 157 aa10.5□□□□□ -0.73
PTPRA-207ENST00000431048 LINC00472Q9H8W2 130 aa10.5□□□□□ -0.73
PTPRA-207ENST00000431048 IGHV6-1A0A0B4J1U7 121 aa10.48□□□□□ -0.73
PTPRA-207ENST00000431048 FABP2P12104 132 aa10.47□□□□□ -0.73
PTPRA-207ENST00000431048 ZCCHC13Q8WW36 166 aaKnown RBP10.47□□□□□ -0.73
PTPRA-207ENST00000431048 HIST1H4GQ99525 98 aa10.47□□□□□ -0.73
PTPRA-207ENST00000431048 A0A1B0GX51 115 aa10.46□□□□□ -0.73
PTPRA-207ENST00000431048 HSBP1L1C9JCN9 74 aa10.45□□□□□ -0.74
PTPRA-207ENST00000431048 DEFB116Q30KQ4 102 aa10.45□□□□□ -0.74
PTPRA-207ENST00000431048 C8orf87E5RJ46 101 aa10.44□□□□□ -0.74
PTPRA-207ENST00000431048 ANKRD29Q8N6D5 301 aa10.43□□□□□ -0.74
PTPRA-207ENST00000431048 RAB37Q96AX2 223 aa10.43□□□□□ -0.74
PTPRA-207ENST00000431048 A0A1B0GVX0 72 aa10.38□□□□□ -0.75
PTPRA-207ENST00000431048 KRTAP20-1Q3LI63 56 aa10.36□□□□□ -0.75
PTPRA-207ENST00000431048 A0A0B4J2C4 111 aa10.35□□□□□ -0.75
PTPRA-207ENST00000431048 WFDC13Q8IUB5 93 aa10.34□□□□□ -0.75
PTPRA-207ENST00000431048 TRACP01848 142 aa10.31□□□□□ -0.76
PTPRA-207ENST00000431048 H3BQ85 93 aa10.3□□□□□ -0.76
PTPRA-207ENST00000431048 CCKP06307 115 aa10.3□□□□□ -0.76
PTPRA-207ENST00000431048 COX8AP10176 69 aa10.29□□□□□ -0.76
PTPRA-207ENST00000431048 DLEU1O43261 78 aa10.28□□□□□ -0.76
PTPRA-207ENST00000431048 HIST1H2BLQ99880 126 aa10.27□□□□□ -0.77
PTPRA-207ENST00000431048 HIST3H2BBQ8N257 126 aa10.25□□□□□ -0.77
PTPRA-207ENST00000431048 ORMDL1Q9P0S3 153 aa10.25□□□□□ -0.77
PTPRA-207ENST00000431048 A0A1B0GV72 72 aa10.24□□□□□ -0.77
PTPRA-207ENST00000431048 TMEM256-PLSCR3K7ERE1 68 aa10.22□□□□□ -0.77
PTPRA-207ENST00000431048 H1FX-AS1Q4G0G2 97 aa10.22□□□□□ -0.77
PTPRA-207ENST00000431048 J3KT08 172 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms