RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 LYNX1G3V0Z9 82 aa3.3□□□□□ -1.88
PTPN4-203ENST00000430976 LYNX1P0DP58 116 aa3.3□□□□□ -1.88
PTPN4-203ENST00000430976 MRGPRG-AS1Q2M3A8 158 aa3.3□□□□□ -1.88
PTPN4-203ENST00000430976 Q8IZM0 81 aa3.3□□□□□ -1.88
PTPN4-203ENST00000430976 ZZEF1O43149 2961 aa3.3□□□□□ -1.88
PTPN4-203ENST00000430976 A0A1W2PNN7 141 aa3.3□□□□□ -1.88
PTPN4-203ENST00000430976 DEFB103AP81534 67 aa3.3□□□□□ -1.88
PTPN4-203ENST00000430976 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.3□□□□□ -1.88
PTPN4-203ENST00000430976 SPRR4Q96PI1 79 aa3.3□□□□□ -1.88
PTPN4-203ENST00000430976 PRR34Q9NV39 138 aa3.3□□□□□ -1.88
PTPN4-203ENST00000430976 KRTAP26-1Q6PEX3 210 aa3.29□□□□□ -1.88
PTPN4-203ENST00000430976 NBDYA0A0U1RRE5 68 aa3.29□□□□□ -1.88
PTPN4-203ENST00000430976 Q9Y3F1 56 aa3.29□□□□□ -1.88
PTPN4-203ENST00000430976 ZNF292O60281 2723 aa3.28□□□□□ -1.88
PTPN4-203ENST00000430976 CSMD1Q96PZ7 3565 aa3.28□□□□□ -1.88
PTPN4-203ENST00000430976 HELZ2Q9BYK8 2649 aaKnown RBP3.28□□□□□ -1.88
PTPN4-203ENST00000430976 BSNQ9UPA5 3926 aa3.28□□□□□ -1.88
PTPN4-203ENST00000430976 A0A096LPF7 62 aa3.28□□□□□ -1.88
PTPN4-203ENST00000430976 A0A0G2JQZ4 141 aa3.28□□□□□ -1.88
PTPN4-203ENST00000430976 Q8N377 158 aa3.28□□□□□ -1.88
PTPN4-203ENST00000430976 Q96NJ1 140 aa3.28□□□□□ -1.88
PTPN4-203ENST00000430976 CUBNO60494 3623 aa3.28□□□□□ -1.89
PTPN4-203ENST00000430976 LORP23490 312 aaPredicted RBP3.27□□□□□ -1.89
PTPN4-203ENST00000430976 IGKV2D-24A0A075B6R9 120 aa3.27□□□□□ -1.89
PTPN4-203ENST00000430976 DEFB136Q30KP8 78 aa3.27□□□□□ -1.89
PTPN4-203ENST00000430976 LCE2CQ5TA81 110 aa3.27□□□□□ -1.89
PTPN4-203ENST00000430976 A0A087WSZ3 146 aa3.26□□□□□ -1.89
PTPN4-203ENST00000430976 BRD3OSQ6XYD6 125 aa3.26□□□□□ -1.89
PTPN4-203ENST00000430976 ASH1LQ9NR48 2969 aaKnown RBP3.26□□□□□ -1.89
PTPN4-203ENST00000430976 MGAM2Q2M2H8 2515 aa3.26□□□□□ -1.89
PTPN4-203ENST00000430976 PANO1I0J062 215 aa3.26□□□□□ -1.89
PTPN4-203ENST00000430976 PRLHP81277 87 aa3.26□□□□□ -1.89
PTPN4-203ENST00000430976 A0A087WTM6 91 aa3.25□□□□□ -1.89
PTPN4-203ENST00000430976 LCE6AA0A183 80 aa3.25□□□□□ -1.89
PTPN4-203ENST00000430976 LINC00472Q9H8W2 130 aa3.25□□□□□ -1.89
PTPN4-203ENST00000430976 Q8N1X5 172 aa3.25□□□□□ -1.89
PTPN4-203ENST00000430976 ADGRG4Q8IZF6 3080 aa3.25□□□□□ -1.89
PTPN4-203ENST00000430976 UBR5O95071 2799 aaPredicted RBP3.25□□□□□ -1.89
PTPN4-203ENST00000430976 CRYBG3Q68DQ2 2970 aa3.25□□□□□ -1.89
PTPN4-203ENST00000430976 R4GN34 69 aa3.24□□□□□ -1.89
PTPN4-203ENST00000430976 A0A096LNI7 61 aa3.23□□□□□ -1.89
PTPN4-203ENST00000430976 DEFB131AP59861 70 aa3.23□□□□□ -1.89
PTPN4-203ENST00000430976 LY6EQ16553 131 aa3.23□□□□□ -1.89
PTPN4-203ENST00000430976 COL4A2P08572 1712 aa3.23□□□□□ -1.89
PTPN4-203ENST00000430976 ANGP03950 147 aaKnown RBP3.23□□□□□ -1.89
PTPN4-203ENST00000430976 DSCR10P59022 87 aa3.23□□□□□ -1.89
PTPN4-203ENST00000430976 RELNP78509 3460 aa3.23□□□□□ -1.89
PTPN4-203ENST00000430976 UNQ6190/PRO20217Q6UXQ8 127 aa3.22□□□□□ -1.89
PTPN4-203ENST00000430976 PLAC8Q9NZF1 115 aa3.22□□□□□ -1.89
PTPN4-203ENST00000430976 NBPF19A0A087WUL8 3843 aa3.22□□□□□ -1.89
PTPN4-203ENST00000430976 Q6ZRX8 168 aa3.21□□□□□ -1.9
PTPN4-203ENST00000430976 GIG44P09565 113 aaPredicted RBP3.21□□□□□ -1.9
PTPN4-203ENST00000430976 SRRM2Q9UQ35 2752 aaKnown RBP3.21□□□□□ -1.9
PTPN4-203ENST00000430976 DEFB131BA0A096LNP1 70 aa3.21□□□□□ -1.9
PTPN4-203ENST00000430976 MAP1AP78559 2803 aaPredicted RBP3.2□□□□□ -1.9
PTPN4-203ENST00000430976 C14orf177Q52M58 125 aa3.2□□□□□ -1.9
PTPN4-203ENST00000430976 COL27A1Q8IZC6 1860 aaPredicted RBP3.2□□□□□ -1.9
PTPN4-203ENST00000430976 KRTAP11-1Q8IUC1 163 aa3.2□□□□□ -1.9
PTPN4-203ENST00000430976 PSORS1C2Q9UIG4 136 aa3.2□□□□□ -1.9
PTPN4-203ENST00000430976 IGLV6-57P01721 117 aa3.2□□□□□ -1.9
PTPN4-203ENST00000430976 C4orf3Q8WVX3 66 aa3.2□□□□□ -1.9
PTPN4-203ENST00000430976 NOP10Q9NPE3 64 aaKnown RBP3.2□□□□□ -1.9
PTPN4-203ENST00000430976 DEFB130BP0DP73 79 aa3.19□□□□□ -1.9
PTPN4-203ENST00000430976 DEFB130AP0DP74 79 aa3.19□□□□□ -1.9
PTPN4-203ENST00000430976 J3QKU1 62 aa3.19□□□□□ -1.9
PTPN4-203ENST00000430976 CELSR1Q9NYQ6 3014 aa3.18□□□□□ -1.9
PTPN4-203ENST00000430976 TENM4Q6N022 2769 aa3.18□□□□□ -1.9
PTPN4-203ENST00000430976 LY6G6CO95867 125 aa3.18□□□□□ -1.9
PTPN4-203ENST00000430976 TP53AIP1Q9HCN2 124 aa3.17□□□□□ -1.9
PTPN4-203ENST00000430976 UBE2DNLQ8IWF7 75 aa3.17□□□□□ -1.9
PTPN4-203ENST00000430976 APLNQ9ULZ1 77 aa3.17□□□□□ -1.9
PTPN4-203ENST00000430976 USP24Q9UPU5 2620 aa3.17□□□□□ -1.9
PTPN4-203ENST00000430976 IGKV2-24A0A0C4DH68 120 aa3.16□□□□□ -1.9
PTPN4-203ENST00000430976 AKAP13Q12802 2813 aa3.16□□□□□ -1.9
PTPN4-203ENST00000430976 CHD6Q8TD26 2715 aa3.16□□□□□ -1.9
PTPN4-203ENST00000430976 STAB1Q9NY15 2570 aa3.16□□□□□ -1.9
PTPN4-203ENST00000430976 A0A1B0GU33 70 aa3.16□□□□□ -1.9
PTPN4-203ENST00000430976 KRTAP15-1Q3LI76 137 aa3.16□□□□□ -1.9
PTPN4-203ENST00000430976 C10orf95Q9H7T3 257 aa3.16□□□□□ -1.9
PTPN4-203ENST00000430976 NF1P21359 2839 aa3.15□□□□□ -1.9
PTPN4-203ENST00000430976 NBEAL2Q6ZNJ1 2754 aa3.15□□□□□ -1.91
PTPN4-203ENST00000430976 HTN3P15516 51 aa3.14□□□□□ -1.91
PTPN4-203ENST00000430976 GCN1Q92616 2671 aaKnown RBP3.13□□□□□ -1.91
PTPN4-203ENST00000430976 FLNCQ14315 2725 aa3.13□□□□□ -1.91
PTPN4-203ENST00000430976 C10orf99Q6UWK7 81 aa3.13□□□□□ -1.91
PTPN4-203ENST00000430976 CENPEQ02224 2701 aa3.11□□□□□ -1.91
PTPN4-203ENST00000430976 LELP1Q5T871 98 aa3.11□□□□□ -1.91
PTPN4-203ENST00000430976 AKAP9Q99996 3911 aa3.11□□□□□ -1.91
PTPN4-203ENST00000430976 TEX15Q9BXT5 2789 aa3.11□□□□□ -1.91
PTPN4-203ENST00000430976 A0A0D9SG42 100 aa3.1□□□□□ -1.91
PTPN4-203ENST00000430976 USMG5Q96IX5 58 aa3.1□□□□□ -1.91
PTPN4-203ENST00000430976 SVEP1Q4LDE5 3571 aa3.1□□□□□ -1.91
PTPN4-203ENST00000430976 UTP20O75691 2785 aaKnown RBP3.09□□□□□ -1.91
PTPN4-203ENST00000430976 FLNAP21333 2647 aaKnown RBP3.09□□□□□ -1.92
PTPN4-203ENST00000430976 APCP25054 2843 aa3.08□□□□□ -1.92
PTPN4-203ENST00000430976 H3BUX3 64 aa3.08□□□□□ -1.92
PTPN4-203ENST00000430976 SPINK6Q6UWN8 80 aa3.08□□□□□ -1.92
PTPN4-203ENST00000430976 NBEAL1Q6ZS30 2694 aa3.08□□□□□ -1.92
PTPN4-203ENST00000430976 IGLV5-48A0A075B6I7 105 aa3.07□□□□□ -1.92
PTPN4-203ENST00000430976 MRPL34Q9BQ48 92 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 190.5 ms