RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 LINC01556Q5JQF7 62 aa10.34□□□□□ -0.75
RHBDF1-204ENST00000428730 SRRM2Q9UQ35 2752 aaKnown RBP10.34□□□□□ -0.75
RHBDF1-204ENST00000428730 TLX1NBP0CAT3 122 aa10.34□□□□□ -0.75
RHBDF1-204ENST00000428730 PRLHP81277 87 aa10.34□□□□□ -0.75
RHBDF1-204ENST00000428730 IGLV5-37A0A075B6J1 123 aa10.33□□□□□ -0.76
RHBDF1-204ENST00000428730 CASC2Q6XLA1 102 aa10.33□□□□□ -0.76
RHBDF1-204ENST00000428730 LIMD2Q9BT23 127 aa10.33□□□□□ -0.76
RHBDF1-204ENST00000428730 REG3GQ6UW15 175 aa10.32□□□□□ -0.76
RHBDF1-204ENST00000428730 SPANXA2-OT1Q8N9U9 137 aa10.32□□□□□ -0.76
RHBDF1-204ENST00000428730 CNBPP62633 177 aaKnown RBP10.31□□□□□ -0.76
RHBDF1-204ENST00000428730 TENM4Q6N022 2769 aa10.31□□□□□ -0.76
RHBDF1-204ENST00000428730 KTN1-AS1Q86SY8 53 aa10.31□□□□□ -0.76
RHBDF1-204ENST00000428730 A6NED7 52 aa10.3□□□□□ -0.76
RHBDF1-204ENST00000428730 H3BNG1 76 aa10.29□□□□□ -0.76
RHBDF1-204ENST00000428730 RBM12B-AS1Q9P1G2 102 aa10.29□□□□□ -0.76
RHBDF1-204ENST00000428730 ANK2Q01484 3957 aa10.29□□□□□ -0.76
RHBDF1-204ENST00000428730 COA5Q86WW8 74 aa10.29□□□□□ -0.76
RHBDF1-204ENST00000428730 C9orf163Q8N9P6 203 aa10.28□□□□□ -0.76
RHBDF1-204ENST00000428730 CSMD3Q7Z407 3707 aa10.28□□□□□ -0.76
RHBDF1-204ENST00000428730 FASNP49327 2511 aaKnown RBP10.26□□□□□ -0.77
RHBDF1-204ENST00000428730 Q75L30 129 aa10.26□□□□□ -0.77
RHBDF1-204ENST00000428730 PCOTHQ58A44 107 aa10.24□□□□□ -0.77
RHBDF1-204ENST00000428730 DEFB131BA0A096LNP1 70 aa10.23□□□□□ -0.77
RHBDF1-204ENST00000428730 A6NN06 94 aa10.22□□□□□ -0.77
RHBDF1-204ENST00000428730 ATP11AUNQ6ZP68 121 aa10.22□□□□□ -0.77
RHBDF1-204ENST00000428730 H3BPC8 53 aa10.21□□□□□ -0.77
RHBDF1-204ENST00000428730 IGKV2-24A0A0C4DH68 120 aa10.21□□□□□ -0.78
RHBDF1-204ENST00000428730 A0A096LNI7 61 aa10.2□□□□□ -0.78
RHBDF1-204ENST00000428730 DNAH10OSP0CZ25 163 aa10.2□□□□□ -0.78
RHBDF1-204ENST00000428730 IGLV8-61A0A075B6I0 122 aa10.2□□□□□ -0.78
RHBDF1-204ENST00000428730 LOC101927531A0A1B0GV80 90 aa10.2□□□□□ -0.78
RHBDF1-204ENST00000428730 A8MWP4 228 aa10.2□□□□□ -0.78
RHBDF1-204ENST00000428730 SPAG11AQ6PDA7 123 aa10.2□□□□□ -0.78
RHBDF1-204ENST00000428730 DNAH1Q9P2D7 4330 aa10.19□□□□□ -0.78
RHBDF1-204ENST00000428730 H0Y9J4 135 aa10.19□□□□□ -0.78
RHBDF1-204ENST00000428730 HELZ2Q9BYK8 2649 aaKnown RBP10.18□□□□□ -0.78
RHBDF1-204ENST00000428730 LINC00472Q9H8W2 130 aa10.18□□□□□ -0.78
RHBDF1-204ENST00000428730 OXLD1Q5BKU9 147 aa10.17□□□□□ -0.78
RHBDF1-204ENST00000428730 IGLV7-46A0A075B6I9 117 aa10.17□□□□□ -0.78
RHBDF1-204ENST00000428730 FLNBO75369 2602 aaKnown RBP10.16□□□□□ -0.78
RHBDF1-204ENST00000428730 FBN1P35555 2871 aaKnown RBP10.16□□□□□ -0.78
RHBDF1-204ENST00000428730 MMP24-AS1A0A0U1RRL7 71 aa10.15□□□□□ -0.78
RHBDF1-204ENST00000428730 DNAH10Q8IVF4 4471 aa10.15□□□□□ -0.78
RHBDF1-204ENST00000428730 KRTAP11-1Q8IUC1 163 aa10.15□□□□□ -0.78
RHBDF1-204ENST00000428730 CDC42SE1Q9NRR8 79 aa10.15□□□□□ -0.78
RHBDF1-204ENST00000428730 MOBPQ13875 183 aa10.13□□□□□ -0.79
RHBDF1-204ENST00000428730 C11orf45Q8TAV5 145 aa10.13□□□□□ -0.79
RHBDF1-204ENST00000428730 KRTAP10-11P60412 298 aa10.13□□□□□ -0.79
RHBDF1-204ENST00000428730 NSD1Q96L73 2696 aaPredicted RBP10.12□□□□□ -0.79
RHBDF1-204ENST00000428730 SPINK7P58062 85 aa10.12□□□□□ -0.79
RHBDF1-204ENST00000428730 INAFM1C9JVW0 142 aa10.11□□□□□ -0.79
RHBDF1-204ENST00000428730 PHF5AQ7RTV0 110 aaKnown RBP10.11□□□□□ -0.79
RHBDF1-204ENST00000428730 NDUFS5O43920 106 aa10.1□□□□□ -0.79
RHBDF1-204ENST00000428730 TENM2Q9NT68 2774 aa10.1□□□□□ -0.79
RHBDF1-204ENST00000428730 LINC01558Q9Y6Z2 57 aa10.08□□□□□ -0.8
RHBDF1-204ENST00000428730 MAST4O15021 2626 aa10.08□□□□□ -0.8
RHBDF1-204ENST00000428730 PLAC8Q9NZF1 115 aa10.07□□□□□ -0.8
RHBDF1-204ENST00000428730 CHTF8P0CG12 524 aa10.06□□□□□ -0.8
RHBDF1-204ENST00000428730 COL7A1Q02388 2944 aa10.06□□□□□ -0.8
RHBDF1-204ENST00000428730 C7orf65Q6ZTY9 151 aa10.06□□□□□ -0.8
RHBDF1-204ENST00000428730 LYSTQ99698 3801 aa10.05□□□□□ -0.8
RHBDF1-204ENST00000428730 HRES1P13985 223 aa10.03□□□□□ -0.8
RHBDF1-204ENST00000428730 HECTD1Q9ULT8 2610 aa10.02□□□□□ -0.81
RHBDF1-204ENST00000428730 NOTCH1P46531 2555 aa10.01□□□□□ -0.81
RHBDF1-204ENST00000428730 SPRR1BP22528 89 aa9.99□□□□□ -0.81
RHBDF1-204ENST00000428730 Q96NJ1 140 aa9.99□□□□□ -0.81
RHBDF1-204ENST00000428730 COL6A5A8TX70 2615 aa9.96□□□□□ -0.81
RHBDF1-204ENST00000428730 KRTAP1-5Q9BYS1 174 aa9.96□□□□□ -0.81
RHBDF1-204ENST00000428730 IGLV9-49A0A0B4J1Y8 123 aa9.96□□□□□ -0.82
RHBDF1-204ENST00000428730 ASB16-AS1Q495Z4 193 aa9.96□□□□□ -0.82
RHBDF1-204ENST00000428730 Q6ZR54 194 aa9.96□□□□□ -0.82
RHBDF1-204ENST00000428730 PRR26Q8N8Z3 221 aa9.96□□□□□ -0.82
RHBDF1-204ENST00000428730 C8orf17Q9NRJ1 99 aa9.96□□□□□ -0.82
RHBDF1-204ENST00000428730 IGHV6-1A0A0B4J1U7 121 aa9.95□□□□□ -0.82
RHBDF1-204ENST00000428730 PRAC1Q96KF2 57 aa9.95□□□□□ -0.82
RHBDF1-204ENST00000428730 K7EIL1 84 aa9.94□□□□□ -0.82
RHBDF1-204ENST00000428730 TP53AIP1Q9HCN2 124 aa9.94□□□□□ -0.82
RHBDF1-204ENST00000428730 A0A087X002 238 aa9.92□□□□□ -0.82
RHBDF1-204ENST00000428730 NOTCH2NLQ7Z3S9 236 aa9.92□□□□□ -0.82
RHBDF1-204ENST00000428730 DNAH9Q9NYC9 4486 aa9.92□□□□□ -0.82
RHBDF1-204ENST00000428730 CMYA5Q8N3K9 4069 aa9.9□□□□□ -0.82
RHBDF1-204ENST00000428730 NBEAL1Q6ZS30 2694 aa9.9□□□□□ -0.82
RHBDF1-204ENST00000428730 STAB1Q9NY15 2570 aa9.9□□□□□ -0.82
RHBDF1-204ENST00000428730 LINC00313P59037 77 aa9.9□□□□□ -0.83
RHBDF1-204ENST00000428730 ADM2Q7Z4H4 148 aa9.9□□□□□ -0.83
RHBDF1-204ENST00000428730 KMT2BQ9UMN6 2715 aaPredicted RBP9.88□□□□□ -0.83
RHBDF1-204ENST00000428730 A0A1B0GVX0 72 aa9.86□□□□□ -0.83
RHBDF1-204ENST00000428730 PANO1I0J062 215 aa9.86□□□□□ -0.83
RHBDF1-204ENST00000428730 C8orf87E5RJ46 101 aa9.85□□□□□ -0.83
RHBDF1-204ENST00000428730 MRPL34Q9BQ48 92 aaKnown RBP9.84□□□□□ -0.83
RHBDF1-204ENST00000428730 Q5W150 140 aa9.82□□□□□ -0.84
RHBDF1-204ENST00000428730 KRTAP13-1Q8IUC0 172 aa9.81□□□□□ -0.84
RHBDF1-204ENST00000428730 HUWE1Q7Z6Z7 4374 aaKnown RBP9.81□□□□□ -0.84
RHBDF1-204ENST00000428730 MDFIQ99750 246 aa9.8□□□□□ -0.84
RHBDF1-204ENST00000428730 ANAPC11Q9NYG5 84 aa9.8□□□□□ -0.84
RHBDF1-204ENST00000428730 DNAH3Q8TD57 4116 aa9.79□□□□□ -0.84
RHBDF1-204ENST00000428730 CDK2AP2O75956 126 aa9.79□□□□□ -0.84
RHBDF1-204ENST00000428730 FRAS1Q86XX4 4008 aa9.76□□□□□ -0.85
RHBDF1-204ENST00000428730 ALMS1Q8TCU4 4167 aa9.74□□□□□ -0.85
RHBDF1-204ENST00000428730 SPINK6Q6UWN8 80 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms