RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 BCE1O60756 84 aa6.43□□□□□ -1.38
HDAC9-210ENST00000428307 NREPQ16612 68 aa6.43□□□□□ -1.38
HDAC9-210ENST00000428307 H0Y9J4 135 aa6.43□□□□□ -1.38
HDAC9-210ENST00000428307 Q8NBF4 154 aa6.41□□□□□ -1.38
HDAC9-210ENST00000428307 CXCL6P80162 114 aa6.4□□□□□ -1.38
HDAC9-210ENST00000428307 KRTAP10-2P60368 255 aa6.4□□□□□ -1.39
HDAC9-210ENST00000428307 IGFL1Q6UW32 110 aa6.4□□□□□ -1.39
HDAC9-210ENST00000428307 KRTAP13-1Q8IUC0 172 aa6.39□□□□□ -1.39
HDAC9-210ENST00000428307 Q8N9L7 120 aa6.39□□□□□ -1.39
HDAC9-210ENST00000428307 PLAC8Q9NZF1 115 aa6.39□□□□□ -1.39
HDAC9-210ENST00000428307 PSORS1C2Q9UIG4 136 aa6.39□□□□□ -1.39
HDAC9-210ENST00000428307 ATOX1O00244 68 aa6.39□□□□□ -1.39
HDAC9-210ENST00000428307 HYDINQ4G0P3 5121 aa6.39□□□□□ -1.39
HDAC9-210ENST00000428307 DNAH6Q9C0G6 4158 aa6.38□□□□□ -1.39
HDAC9-210ENST00000428307 BPY2O14599 106 aa6.37□□□□□ -1.39
HDAC9-210ENST00000428307 SPRR4Q96PI1 79 aa6.37□□□□□ -1.39
HDAC9-210ENST00000428307 DNAH17Q9UFH2 4485 aa6.37□□□□□ -1.39
HDAC9-210ENST00000428307 FAM30AQ9NZY2 134 aa6.37□□□□□ -1.39
HDAC9-210ENST00000428307 CRYGAP11844 174 aa6.36□□□□□ -1.39
HDAC9-210ENST00000428307 SPRR1BP22528 89 aa6.36□□□□□ -1.39
HDAC9-210ENST00000428307 FRAS1Q86XX4 4008 aa6.36□□□□□ -1.39
HDAC9-210ENST00000428307 IGLV8-61A0A075B6I0 122 aa6.35□□□□□ -1.39
HDAC9-210ENST00000428307 A0A1B0GW54 56 aa6.35□□□□□ -1.39
HDAC9-210ENST00000428307 A0A087WSZ3 146 aa6.34□□□□□ -1.39
HDAC9-210ENST00000428307 COX7CP15954 63 aa6.33□□□□□ -1.4
HDAC9-210ENST00000428307 IGLV9-49A0A0B4J1Y8 123 aa6.33□□□□□ -1.4
HDAC9-210ENST00000428307 UQCRQO14949 82 aa6.33□□□□□ -1.4
HDAC9-210ENST00000428307 CIRBP-AS1Q8TBR5 109 aa6.33□□□□□ -1.4
HDAC9-210ENST00000428307 ANAPC11Q9NYG5 84 aa6.33□□□□□ -1.4
HDAC9-210ENST00000428307 DEFB116Q30KQ4 102 aa6.32□□□□□ -1.4
HDAC9-210ENST00000428307 SERP2Q8N6R1 65 aa6.32□□□□□ -1.4
HDAC9-210ENST00000428307 DNAH8Q96JB1 4490 aa6.32□□□□□ -1.4
HDAC9-210ENST00000428307 ZNF861PO60384 105 aa6.32□□□□□ -1.4
HDAC9-210ENST00000428307 IGKV4-1P06312 121 aa6.32□□□□□ -1.4
HDAC9-210ENST00000428307 C9orf153Q5TBE3 101 aa6.31□□□□□ -1.4
HDAC9-210ENST00000428307 KRTAP10-1P60331 282 aa6.31□□□□□ -1.4
HDAC9-210ENST00000428307 DNAH11Q96DT5 4516 aa6.31□□□□□ -1.4
HDAC9-210ENST00000428307 DNAH5Q8TE73 4624 aa6.3□□□□□ -1.4
HDAC9-210ENST00000428307 ALMS1Q8TCU4 4167 aa6.3□□□□□ -1.4
HDAC9-210ENST00000428307 DSCR10P59022 87 aa6.29□□□□□ -1.4
HDAC9-210ENST00000428307 FAT2Q9NYQ8 4349 aa6.28□□□□□ -1.4
HDAC9-210ENST00000428307 IGLV7-43P04211 117 aa6.28□□□□□ -1.4
HDAC9-210ENST00000428307 ZNF706Q9Y5V0 76 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-210ENST00000428307 K7EQZ3 153 aa6.27□□□□□ -1.41
HDAC9-210ENST00000428307 LINC00483Q53H64 154 aa6.27□□□□□ -1.41
HDAC9-210ENST00000428307 SS18L2Q9UHA2 77 aa6.27□□□□□ -1.41
HDAC9-210ENST00000428307 PKD1P98161 4303 aa6.27□□□□□ -1.41
HDAC9-210ENST00000428307 HRCT1Q6UXD1 115 aa6.26□□□□□ -1.41
HDAC9-210ENST00000428307 CYSTM1Q9H1C7 97 aa6.26□□□□□ -1.41
HDAC9-210ENST00000428307 MOBPQ13875 183 aa6.25□□□□□ -1.41
HDAC9-210ENST00000428307 Q6ZSA8 131 aa6.25□□□□□ -1.41
HDAC9-210ENST00000428307 RPL37AP61513 92 aaKnown RBP6.24□□□□□ -1.41
HDAC9-210ENST00000428307 TRAV7A0A075B6U4 112 aa6.24□□□□□ -1.41
HDAC9-210ENST00000428307 C20orf197Q8N268 126 aa6.24□□□□□ -1.41
HDAC9-210ENST00000428307 LRP1BQ9NZR2 4599 aa6.23□□□□□ -1.41
HDAC9-210ENST00000428307 SMIM20Q8N5G0 67 aa6.22□□□□□ -1.41
HDAC9-210ENST00000428307 LINC00472Q9H8W2 130 aa6.21□□□□□ -1.42
HDAC9-210ENST00000428307 SACSQ9NZJ4 4579 aa6.21□□□□□ -1.42
HDAC9-210ENST00000428307 LCE6AA0A183 80 aa6.2□□□□□ -1.42
HDAC9-210ENST00000428307 PKHD1P08F94 4074 aa6.2□□□□□ -1.42
HDAC9-210ENST00000428307 SNURFQ9Y675 71 aa6.19□□□□□ -1.42
HDAC9-210ENST00000428307 OCR1Q9BZK8 76 aa6.18□□□□□ -1.42
HDAC9-210ENST00000428307 HCG22E2RYF7 251 aa6.18□□□□□ -1.42
HDAC9-210ENST00000428307 WFDC13Q8IUB5 93 aa6.18□□□□□ -1.42
HDAC9-210ENST00000428307 A8MWP4 228 aa6.16□□□□□ -1.42
HDAC9-210ENST00000428307 PRR15Q8IV56 129 aa6.16□□□□□ -1.42
HDAC9-210ENST00000428307 VPS13BQ7Z7G8 4022 aa6.15□□□□□ -1.42
HDAC9-210ENST00000428307 A0A087X002 238 aa6.15□□□□□ -1.43
HDAC9-210ENST00000428307 Q96NJ1 140 aa6.15□□□□□ -1.43
HDAC9-210ENST00000428307 LINC00336Q6ZUF6 198 aa6.14□□□□□ -1.43
HDAC9-210ENST00000428307 TMEM254Q8TBM7 123 aa6.14□□□□□ -1.43
HDAC9-210ENST00000428307 KLKP1Q107X0 134 aa6.13□□□□□ -1.43
HDAC9-210ENST00000428307 KMT2CQ8NEZ4 4911 aaKnown RBP6.13□□□□□ -1.43
HDAC9-210ENST00000428307 J3KT08 172 aa6.12□□□□□ -1.43
HDAC9-210ENST00000428307 NDUFB1O75438 58 aa6.12□□□□□ -1.43
HDAC9-210ENST00000428307 SMR3BP02814 79 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-210ENST00000428307 CASC2Q6XLA1 102 aa6.11□□□□□ -1.43
HDAC9-210ENST00000428307 H7BZZ5 65 aa6.11□□□□□ -1.43
HDAC9-210ENST00000428307 KRTAP13-2Q52LG2 175 aa6.11□□□□□ -1.43
HDAC9-210ENST00000428307 SSBP3-AS1Q7Z2R9 100 aa6.11□□□□□ -1.43
HDAC9-210ENST00000428307 KRTAP29-1A8MX34 341 aaPredicted RBP6.1□□□□□ -1.43
HDAC9-210ENST00000428307 TMEM258P61165 79 aa6.1□□□□□ -1.43
HDAC9-210ENST00000428307 SPINK6Q6UWN8 80 aa6.1□□□□□ -1.43
HDAC9-210ENST00000428307 A0A1B0GVY2 172 aa6.1□□□□□ -1.43
HDAC9-210ENST00000428307 IGHV6-1A0A0B4J1U7 121 aa6.09□□□□□ -1.43
HDAC9-210ENST00000428307 KRTAP1-4P0C5Y4 121 aa6.09□□□□□ -1.43
HDAC9-210ENST00000428307 C4orf48Q5BLP8 95 aa6.09□□□□□ -1.43
HDAC9-210ENST00000428307 CDK2AP2O75956 126 aa6.08□□□□□ -1.44
HDAC9-210ENST00000428307 PLA2G1BP04054 148 aaKnown RBP6.08□□□□□ -1.44
HDAC9-210ENST00000428307 A0A0U1RQV1 116 aa6.07□□□□□ -1.44
HDAC9-210ENST00000428307 MMP24-AS1A0A0U1RRL7 71 aa6.07□□□□□ -1.44
HDAC9-210ENST00000428307 LCE2BO14633 110 aa6.07□□□□□ -1.44
HDAC9-210ENST00000428307 RYR2Q92736 4967 aa6.07□□□□□ -1.44
HDAC9-210ENST00000428307 DYNC1H1Q14204 4646 aaKnown RBP6.06□□□□□ -1.44
HDAC9-210ENST00000428307 hDV103S1A0JD37 113 aa6.06□□□□□ -1.44
HDAC9-210ENST00000428307 CD164Q04900 197 aa6.06□□□□□ -1.44
HDAC9-210ENST00000428307 FAM229BQ4G0N7 80 aa6.06□□□□□ -1.44
HDAC9-210ENST00000428307 A0A1B0GVX0 72 aa6.05□□□□□ -1.44
HDAC9-210ENST00000428307 C5orf47Q569G3 176 aa6.04□□□□□ -1.44
HDAC9-210ENST00000428307 NOTCH2NLQ7Z3S9 236 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms