RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 H7BZZ5 65 aa7.24□□□□□ -1.25
UBR4-207ENST00000425413 IGKV4-1P06312 121 aa7.24□□□□□ -1.25
UBR4-207ENST00000425413 DEFB116Q30KQ4 102 aa7.24□□□□□ -1.25
UBR4-207ENST00000425413 BCE1O60756 84 aa7.23□□□□□ -1.25
UBR4-207ENST00000425413 Q6ZRN7 208 aaPredicted RBP7.23□□□□□ -1.25
UBR4-207ENST00000425413 Q8NBF4 154 aa7.23□□□□□ -1.25
UBR4-207ENST00000425413 DYNC2H1Q8NCM8 4307 aaKnown RBP7.22□□□□□ -1.25
UBR4-207ENST00000425413 UBE2AP49459 152 aa7.22□□□□□ -1.25
UBR4-207ENST00000425413 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.22□□□□□ -1.25
UBR4-207ENST00000425413 IGFL1Q6UW32 110 aa7.21□□□□□ -1.26
UBR4-207ENST00000425413 KLKP1Q107X0 134 aa7.2□□□□□ -1.26
UBR4-207ENST00000425413 FBN3Q75N90 2809 aa7.19□□□□□ -1.26
UBR4-207ENST00000425413 KMT2AQ03164 3969 aa7.19□□□□□ -1.26
UBR4-207ENST00000425413 C4orf26Q17RF5 130 aa7.18□□□□□ -1.26
UBR4-207ENST00000425413 TMEM254Q8TBM7 123 aa7.18□□□□□ -1.26
UBR4-207ENST00000425413 FAM30AQ9NZY2 134 aa7.18□□□□□ -1.26
UBR4-207ENST00000425413 A0A087WSZ3 146 aa7.18□□□□□ -1.26
UBR4-207ENST00000425413 A0A087WTM6 91 aa7.17□□□□□ -1.26
UBR4-207ENST00000425413 VPS13DQ5THJ4 4388 aa7.17□□□□□ -1.26
UBR4-207ENST00000425413 SPRR4Q96PI1 79 aa7.16□□□□□ -1.26
UBR4-207ENST00000425413 K7EQZ3 153 aa7.15□□□□□ -1.26
UBR4-207ENST00000425413 HRCT1Q6UXD1 115 aa7.15□□□□□ -1.27
UBR4-207ENST00000425413 LY6G6CO95867 125 aa7.14□□□□□ -1.27
UBR4-207ENST00000425413 DSCR10P59022 87 aa7.14□□□□□ -1.27
UBR4-207ENST00000425413 OCR1Q9BZK8 76 aa7.14□□□□□ -1.27
UBR4-207ENST00000425413 LINC00474Q9P2X8 69 aa7.14□□□□□ -1.27
UBR4-207ENST00000425413 RTL8CO15255 209 aa7.14□□□□□ -1.27
UBR4-207ENST00000425413 SERP1Q9Y6X1 66 aa7.14□□□□□ -1.27
UBR4-207ENST00000425413 DNAH2Q9P225 4427 aa7.13□□□□□ -1.27
UBR4-207ENST00000425413 RPL37AP61513 92 aaKnown RBP7.13□□□□□ -1.27
UBR4-207ENST00000425413 SPACA4Q8TDM5 124 aa7.13□□□□□ -1.27
UBR4-207ENST00000425413 Q5XG85 94 aa7.12□□□□□ -1.27
UBR4-207ENST00000425413 IGLV9-49A0A0B4J1Y8 123 aa7.12□□□□□ -1.27
UBR4-207ENST00000425413 NDUFC1O43677 76 aa7.11□□□□□ -1.27
UBR4-207ENST00000425413 ANAPC11Q9NYG5 84 aa7.11□□□□□ -1.27
UBR4-207ENST00000425413 C5orf47Q569G3 176 aa7.1□□□□□ -1.27
UBR4-207ENST00000425413 Q6ZR54 194 aa7.09□□□□□ -1.27
UBR4-207ENST00000425413 WFDC13Q8IUB5 93 aa7.09□□□□□ -1.27
UBR4-207ENST00000425413 A0A0U1RQV1 116 aa7.08□□□□□ -1.28
UBR4-207ENST00000425413 A0A1B0GW54 56 aa7.08□□□□□ -1.28
UBR4-207ENST00000425413 IGLV5-52A0A0A0MRZ9 124 aa7.08□□□□□ -1.28
UBR4-207ENST00000425413 H0Y9J4 135 aa7.08□□□□□ -1.28
UBR4-207ENST00000425413 C1orf134Q5TEV5 83 aa7.08□□□□□ -1.28
UBR4-207ENST00000425413 PKIGQ9Y2B9 76 aa7.08□□□□□ -1.28
UBR4-207ENST00000425413 IGLV8-61A0A075B6I0 122 aa7.07□□□□□ -1.28
UBR4-207ENST00000425413 PSORS1C2Q9UIG4 136 aa7.07□□□□□ -1.28
UBR4-207ENST00000425413 KRTAP13-1Q8IUC0 172 aa7.06□□□□□ -1.28
UBR4-207ENST00000425413 HECTD4Q9Y4D8 3996 aa7.06□□□□□ -1.28
UBR4-207ENST00000425413 SPRR1BP22528 89 aa7.05□□□□□ -1.28
UBR4-207ENST00000425413 FRAS1Q86XX4 4008 aa7.04□□□□□ -1.28
UBR4-207ENST00000425413 HCG22E2RYF7 251 aa7.04□□□□□ -1.28
UBR4-207ENST00000425413 SMIM26A0A096LP01 95 aa7.03□□□□□ -1.28
UBR4-207ENST00000425413 FP248Q71RG6 208 aaPredicted RBP7.02□□□□□ -1.28
UBR4-207ENST00000425413 MPLKIPQ8TAP9 179 aa7.02□□□□□ -1.28
UBR4-207ENST00000425413 ATP5EP56381 51 aaPredicted RBP7.02□□□□□ -1.29
UBR4-207ENST00000425413 PRR4Q16378 134 aa7.02□□□□□ -1.29
UBR4-207ENST00000425413 FAM229BQ4G0N7 80 aa7.02□□□□□ -1.29
UBR4-207ENST00000425413 DNAH17Q9UFH2 4485 aa7.01□□□□□ -1.29
UBR4-207ENST00000425413 MOBPQ13875 183 aa7.01□□□□□ -1.29
UBR4-207ENST00000425413 KRTAP10-2P60368 255 aa7□□□□□ -1.29
UBR4-207ENST00000425413 DNAH8Q96JB1 4490 aa7□□□□□ -1.29
UBR4-207ENST00000425413 DNAH6Q9C0G6 4158 aa6.99□□□□□ -1.29
UBR4-207ENST00000425413 PLAC8Q9NZF1 115 aa6.99□□□□□ -1.29
UBR4-207ENST00000425413 LINC00472Q9H8W2 130 aa6.97□□□□□ -1.29
UBR4-207ENST00000425413 DNAH11Q96DT5 4516 aa6.97□□□□□ -1.29
UBR4-207ENST00000425413 ZNF861PO60384 105 aa6.96□□□□□ -1.29
UBR4-207ENST00000425413 CASC2Q6XLA1 102 aa6.96□□□□□ -1.3
UBR4-207ENST00000425413 PRR15Q8IV56 129 aa6.96□□□□□ -1.3
UBR4-207ENST00000425413 LINC00336Q6ZUF6 198 aa6.95□□□□□ -1.3
UBR4-207ENST00000425413 WWC2-AS2Q96NR7 200 aa6.95□□□□□ -1.3
UBR4-207ENST00000425413 A8MWP4 228 aa6.94□□□□□ -1.3
UBR4-207ENST00000425413 LCE6AA0A183 80 aa6.94□□□□□ -1.3
UBR4-207ENST00000425413 CIRBP-AS1Q8TBR5 109 aa6.94□□□□□ -1.3
UBR4-207ENST00000425413 LINC00208Q96KT6 92 aa6.94□□□□□ -1.3
UBR4-207ENST00000425413 MP68P56378 58 aa6.93□□□□□ -1.3
UBR4-207ENST00000425413 ZNF706Q9Y5V0 76 aaPredicted RBP6.93□□□□□ -1.3
UBR4-207ENST00000425413 HYDINQ4G0P3 5121 aa6.93□□□□□ -1.3
UBR4-207ENST00000425413 LINC00483Q53H64 154 aa6.93□□□□□ -1.3
UBR4-207ENST00000425413 IGLV7-43P04211 117 aa6.92□□□□□ -1.3
UBR4-207ENST00000425413 ZCCHC13Q8WW36 166 aaKnown RBP6.92□□□□□ -1.3
UBR4-207ENST00000425413 SPINK6Q6UWN8 80 aa6.91□□□□□ -1.3
UBR4-207ENST00000425413 C1orf64Q8NEQ6 169 aa6.91□□□□□ -1.3
UBR4-207ENST00000425413 DNAH5Q8TE73 4624 aa6.91□□□□□ -1.3
UBR4-207ENST00000425413 KRTAP29-1A8MX34 341 aaPredicted RBP6.9□□□□□ -1.3
UBR4-207ENST00000425413 IGHV6-1A0A0B4J1U7 121 aa6.9□□□□□ -1.31
UBR4-207ENST00000425413 NDUFB1O75438 58 aa6.9□□□□□ -1.31
UBR4-207ENST00000425413 Q96NJ1 140 aa6.9□□□□□ -1.31
UBR4-207ENST00000425413 H0Y9P7 68 aa6.89□□□□□ -1.31
UBR4-207ENST00000425413 KRTAP10-1P60331 282 aa6.89□□□□□ -1.31
UBR4-207ENST00000425413 hDV103S1A0JD37 113 aa6.88□□□□□ -1.31
UBR4-207ENST00000425413 BRK1Q8WUW1 75 aa6.88□□□□□ -1.31
UBR4-207ENST00000425413 MMP24-AS1A0A0U1RRL7 71 aa6.87□□□□□ -1.31
UBR4-207ENST00000425413 LRP1BQ9NZR2 4599 aa6.87□□□□□ -1.31
UBR4-207ENST00000425413 NDUFS5O43920 106 aa6.86□□□□□ -1.31
UBR4-207ENST00000425413 TRAV22A0A0B4J277 110 aa6.85□□□□□ -1.31
UBR4-207ENST00000425413 A0A087X002 238 aa6.85□□□□□ -1.31
UBR4-207ENST00000425413 CDK2AP2O75956 126 aa6.85□□□□□ -1.31
UBR4-207ENST00000425413 NOTCH2NLQ7Z3S9 236 aa6.85□□□□□ -1.31
UBR4-207ENST00000425413 PRO0628Q9UI54 55 aa6.83□□□□□ -1.32
UBR4-207ENST00000425413 ALMS1Q8TCU4 4167 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms