RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 MT1FP04733 61 aa7.21□□□□□ -1.26
NFE4-201ENST00000420058 TRBV7-7A0A0K0K1E9 115 aa7.19□□□□□ -1.26
NFE4-201ENST00000420058 LINC01545Q5VT33 79 aa7.19□□□□□ -1.26
NFE4-201ENST00000420058 A4D1N5 150 aa7.18□□□□□ -1.26
NFE4-201ENST00000420058 A6NDN8 102 aa7.18□□□□□ -1.26
NFE4-201ENST00000420058 IGFL1Q6UW32 110 aa7.17□□□□□ -1.26
NFE4-201ENST00000420058 SMIM11BQ8TCY0 68 aa7.17□□□□□ -1.26
NFE4-201ENST00000420058 Q96NJ1 140 aa7.16□□□□□ -1.26
NFE4-201ENST00000420058 C20orf166-AS1Q96NR2 134 aa7.16□□□□□ -1.26
NFE4-201ENST00000420058 COLCA2A8K830 154 aa7.15□□□□□ -1.26
NFE4-201ENST00000420058 MUSTN1Q8IVN3 82 aa7.15□□□□□ -1.26
NFE4-201ENST00000420058 A8MUU9 505 aa7.14□□□□□ -1.27
NFE4-201ENST00000420058 IFITM1P13164 125 aa7.14□□□□□ -1.27
NFE4-201ENST00000420058 Q6JHZ5 121 aa7.14□□□□□ -1.27
NFE4-201ENST00000420058 CLEC2BQ92478 149 aa7.14□□□□□ -1.27
NFE4-201ENST00000420058 NHP2Q9NX24 153 aaKnown RBP7.14□□□□□ -1.27
NFE4-201ENST00000420058 KRTAP16-1A8MUX0 517 aa7.13□□□□□ -1.27
NFE4-201ENST00000420058 PET117Q6UWS5 81 aa7.13□□□□□ -1.27
NFE4-201ENST00000420058 TMEM238LA0A1B0GVL6 79 aa7.12□□□□□ -1.27
NFE4-201ENST00000420058 F8WEM9 126 aa7.12□□□□□ -1.27
NFE4-201ENST00000420058 OCIAD2Q56VL3 154 aa7.12□□□□□ -1.27
NFE4-201ENST00000420058 LINC00575Q6W349 94 aa7.12□□□□□ -1.27
NFE4-201ENST00000420058 ANKRD39Q53RE8 183 aa7.1□□□□□ -1.27
NFE4-201ENST00000420058 SCGB1D4Q6XE38 83 aa7.1□□□□□ -1.27
NFE4-201ENST00000420058 Q6ZQY7 126 aa7.1□□□□□ -1.27
NFE4-201ENST00000420058 TRBV20-1A0A075B6N2 111 aa7.09□□□□□ -1.27
NFE4-201ENST00000420058 TRAV13-2A0A0B4J235 113 aa7.09□□□□□ -1.27
NFE4-201ENST00000420058 C3orf79P0CE67 100 aa7.09□□□□□ -1.27
NFE4-201ENST00000420058 KRTAP10-10P60014 251 aa7.09□□□□□ -1.27
NFE4-201ENST00000420058 Q6ZVH6 145 aa7.09□□□□□ -1.27
NFE4-201ENST00000420058 LST1O00453 97 aa7.08□□□□□ -1.28
NFE4-201ENST00000420058 LCE1DQ5T752 114 aa7.08□□□□□ -1.28
NFE4-201ENST00000420058 MPLKIPQ8TAP9 179 aa7.08□□□□□ -1.28
NFE4-201ENST00000420058 COPS9Q8WXC6 57 aa7.08□□□□□ -1.28
NFE4-201ENST00000420058 SLC7A5P1Q8MH63 180 aa7.07□□□□□ -1.28
NFE4-201ENST00000420058 hADV29S1A0JD25 119 aa7.06□□□□□ -1.28
NFE4-201ENST00000420058 HIST1H2BKO60814 126 aa7.06□□□□□ -1.28
NFE4-201ENST00000420058 HIST1H2BJP06899 126 aa7.06□□□□□ -1.28
NFE4-201ENST00000420058 HIST1H2BOP23527 126 aa7.06□□□□□ -1.28
NFE4-201ENST00000420058 HIST1H2BBP33778 126 aa7.06□□□□□ -1.28
NFE4-201ENST00000420058 HIST1H2BDP58876 126 aa7.06□□□□□ -1.28
NFE4-201ENST00000420058 HIST1H2BCP62807 126 aa7.06□□□□□ -1.28
NFE4-201ENST00000420058 HIST2H2BEQ16778 126 aa7.06□□□□□ -1.28
NFE4-201ENST00000420058 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.06□□□□□ -1.28
NFE4-201ENST00000420058 HIST1H2BHQ93079 126 aa7.06□□□□□ -1.28
NFE4-201ENST00000420058 HIST1H2BNQ99877 126 aa7.06□□□□□ -1.28
NFE4-201ENST00000420058 HIST1H2BMQ99879 126 aa7.06□□□□□ -1.28
NFE4-201ENST00000420058 KRTAP19-6Q3LI70 58 aa7.05□□□□□ -1.28
NFE4-201ENST00000420058 VAMP3Q15836 100 aa7.04□□□□□ -1.28
NFE4-201ENST00000420058 H3BUT2 72 aa7.03□□□□□ -1.28
NFE4-201ENST00000420058 HRES1P13985 223 aa7.02□□□□□ -1.29
NFE4-201ENST00000420058 KRTAP4-7Q9BYR0 210 aa7.01□□□□□ -1.29
NFE4-201ENST00000420058 DSCR10P59022 87 aa7□□□□□ -1.29
NFE4-201ENST00000420058 KRTAP19-4Q3LI73 84 aa7□□□□□ -1.29
NFE4-201ENST00000420058 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7□□□□□ -1.29
NFE4-201ENST00000420058 KRTDAPP60985 99 aa6.99□□□□□ -1.29
NFE4-201ENST00000420058 ATOH7Q8N100 152 aa6.99□□□□□ -1.29
NFE4-201ENST00000420058 FAM236DA0A1B0GTK5 79 aa6.98□□□□□ -1.29
NFE4-201ENST00000420058 FAM236CP0DP71 79 aa6.98□□□□□ -1.29
NFE4-201ENST00000420058 PPDPFLQ8WWR9 84 aa6.98□□□□□ -1.29
NFE4-201ENST00000420058 SNHG12Q9BXW3 62 aa6.98□□□□□ -1.29
NFE4-201ENST00000420058 NOTCH2NLQ7Z3S9 236 aa6.97□□□□□ -1.29
NFE4-201ENST00000420058 SS18L2Q9UHA2 77 aa6.96□□□□□ -1.3
NFE4-201ENST00000420058 KRTAP6-3Q3LI67 103 aa6.95□□□□□ -1.3
NFE4-201ENST00000420058 COA6Q5JTJ3 125 aaKnown RBP6.95□□□□□ -1.3
NFE4-201ENST00000420058 TEN1Q86WV5 123 aa6.95□□□□□ -1.3
NFE4-201ENST00000420058 A0A087WSZ3 146 aa6.93□□□□□ -1.3
NFE4-201ENST00000420058 SCGB1D1O95968 90 aa6.93□□□□□ -1.3
NFE4-201ENST00000420058 RBM12B-AS1Q9P1G2 102 aa6.93□□□□□ -1.3
NFE4-201ENST00000420058 LINC00846Q9NV44 126 aa6.92□□□□□ -1.3
NFE4-201ENST00000420058 LINC00313P59037 77 aa6.9□□□□□ -1.3
NFE4-201ENST00000420058 NEBP20929 6669 aa6.88□□□□□ -1.31
NFE4-201ENST00000420058 NDUFV3P56181 108 aaKnown RBP6.88□□□□□ -1.31
NFE4-201ENST00000420058 BVES-AS1Q5T3Y7 98 aa6.88□□□□□ -1.31
NFE4-201ENST00000420058 A0A1W2PNM2 257 aa6.87□□□□□ -1.31
NFE4-201ENST00000420058 C12orf57Q99622 126 aa6.86□□□□□ -1.31
NFE4-201ENST00000420058 SNRPEP62304 92 aaKnown RBP6.85□□□□□ -1.31
NFE4-201ENST00000420058 FAM218AQ96MZ4 157 aa6.85□□□□□ -1.31
NFE4-201ENST00000420058 MUC12Q9UKN1 5478 aa6.85□□□□□ -1.31
NFE4-201ENST00000420058 SIGMAR1Q99720 223 aa6.84□□□□□ -1.31
NFE4-201ENST00000420058 KRTAP4-9Q9BYQ8 210 aa6.84□□□□□ -1.31
NFE4-201ENST00000420058 H3BMG7 143 aa6.82□□□□□ -1.32
NFE4-201ENST00000420058 IGKV4-1P06312 121 aa6.82□□□□□ -1.32
NFE4-201ENST00000420058 H3BS24 57 aa6.8□□□□□ -1.32
NFE4-201ENST00000420058 LINC00472Q9H8W2 130 aa6.8□□□□□ -1.32
NFE4-201ENST00000420058 DEFB116Q30KQ4 102 aa6.79□□□□□ -1.32
NFE4-201ENST00000420058 H0YGX0 51 aa6.77□□□□□ -1.33
NFE4-201ENST00000420058 LCE4AQ5TA78 99 aa6.77□□□□□ -1.33
NFE4-201ENST00000420058 Q8N9P0 234 aaPredicted RBP6.77□□□□□ -1.33
NFE4-201ENST00000420058 A8MWP4 228 aa6.76□□□□□ -1.33
NFE4-201ENST00000420058 HIST1H4GQ99525 98 aa6.76□□□□□ -1.33
NFE4-201ENST00000420058 IGHV6-1A0A0B4J1U7 121 aa6.75□□□□□ -1.33
NFE4-201ENST00000420058 TRBV7-4A0A0J9YYF1 115 aa6.75□□□□□ -1.33
NFE4-201ENST00000420058 SPINK7P58062 85 aa6.75□□□□□ -1.33
NFE4-201ENST00000420058 MTURNQ8N3F0 131 aa6.75□□□□□ -1.33
NFE4-201ENST00000420058 FABP2P12104 132 aa6.74□□□□□ -1.33
NFE4-201ENST00000420058 ZCCHC13Q8WW36 166 aaKnown RBP6.72□□□□□ -1.33
NFE4-201ENST00000420058 HSBP1L1C9JCN9 74 aa6.71□□□□□ -1.34
NFE4-201ENST00000420058 SNCGO76070 127 aa6.71□□□□□ -1.34
NFE4-201ENST00000420058 HIST1H2BLQ99880 126 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms