RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 HERV-K104P63124 156 aa1.86□□□□□ -2.11
SEMA3A-202ENST00000420047 NDUFA5Q16718 116 aa1.86□□□□□ -2.11
SEMA3A-202ENST00000420047 ASB16-AS1Q495Z4 193 aa1.86□□□□□ -2.11
SEMA3A-202ENST00000420047 PCOTHQ58A44 107 aa1.86□□□□□ -2.11
SEMA3A-202ENST00000420047 S100A7L2Q5SY68 101 aa1.86□□□□□ -2.11
SEMA3A-202ENST00000420047 C9orf153Q5TBE3 101 aa1.86□□□□□ -2.11
SEMA3A-202ENST00000420047 SPAG11AQ6PDA7 123 aa1.86□□□□□ -2.11
SEMA3A-202ENST00000420047 Q6ZRX8 168 aa1.86□□□□□ -2.11
SEMA3A-202ENST00000420047 ARL17AQ8IVW1 177 aa1.86□□□□□ -2.11
SEMA3A-202ENST00000420047 TRAV23DV6A0A075B6W5 121 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 E9PLD3 99 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 SYS1-DBNDD2H3BUS1 97 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 ZNF73O43830 326 aaPredicted RBP1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 HIST1H2BKO60814 126 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 SPINK1P00995 79 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 HIST1H2BJP06899 126 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 C3orf79P0CE67 100 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 HIST1H2BOP23527 126 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 HIST1H2BBP33778 126 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 HIST1H2BDP58876 126 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 HIST1H2BCP62807 126 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 HIST2H2BEQ16778 126 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 SSBP3-AS1Q7Z2R9 100 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 LINC00308Q8TCZ7 52 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 HIST1H2BHQ93079 126 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 HIST1H2BNQ99877 126 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 HIST1H2BMQ99879 126 aa1.85□□□□□ -2.11
SEMA3A-202ENST00000420047 IGLV8-61A0A075B6I0 122 aa1.84□□□□□ -2.11
SEMA3A-202ENST00000420047 TRBV10-2A0A0K0K1G8 114 aa1.84□□□□□ -2.11
SEMA3A-202ENST00000420047 ZNF815PA8K554 130 aa1.84□□□□□ -2.11
SEMA3A-202ENST00000420047 KRTDAPP60985 99 aa1.84□□□□□ -2.11
SEMA3A-202ENST00000420047 TAL2Q16559 108 aa1.84□□□□□ -2.11
SEMA3A-202ENST00000420047 C6orf99Q4VX62 202 aa1.84□□□□□ -2.11
SEMA3A-202ENST00000420047 PCP2Q8IVA1 136 aa1.84□□□□□ -2.11
SEMA3A-202ENST00000420047 MUSTN1Q8IVN3 82 aa1.84□□□□□ -2.11
SEMA3A-202ENST00000420047 HSPB8Q9UJY1 196 aa1.84□□□□□ -2.11
SEMA3A-202ENST00000420047 ZNF706Q9Y5V0 76 aaPredicted RBP1.84□□□□□ -2.11
SEMA3A-202ENST00000420047 A0A0U1RQV1 116 aa1.83□□□□□ -2.12
SEMA3A-202ENST00000420047 LINC00587B1AMM8 73 aa1.83□□□□□ -2.12
SEMA3A-202ENST00000420047 SLC25A20O43772 301 aa1.83□□□□□ -2.12
SEMA3A-202ENST00000420047 NDUFC2O95298 119 aa1.83□□□□□ -2.12
SEMA3A-202ENST00000420047 HERVK_113P61574 105 aa1.83□□□□□ -2.12
SEMA3A-202ENST00000420047 MT1HP80294 61 aa1.83□□□□□ -2.12
SEMA3A-202ENST00000420047 LINC01545Q5VT33 79 aa1.83□□□□□ -2.12
SEMA3A-202ENST00000420047 FP248Q71RG6 208 aaPredicted RBP1.83□□□□□ -2.12
SEMA3A-202ENST00000420047 LINC00518Q8N0U6 118 aa1.83□□□□□ -2.12
SEMA3A-202ENST00000420047 MIEN1Q9BRT3 115 aa1.83□□□□□ -2.12
SEMA3A-202ENST00000420047 SPANXB1Q9NS25 103 aaPredicted RBP1.83□□□□□ -2.12
SEMA3A-202ENST00000420047 A6NDN8 102 aa1.82□□□□□ -2.12
SEMA3A-202ENST00000420047 SPRR1BP22528 89 aa1.82□□□□□ -2.12
SEMA3A-202ENST00000420047 COX7BP24311 80 aa1.82□□□□□ -2.12
SEMA3A-202ENST00000420047 PLNP26678 52 aa1.82□□□□□ -2.12
SEMA3A-202ENST00000420047 NMUP48645 174 aa1.82□□□□□ -2.12
SEMA3A-202ENST00000420047 C1orf195Q5TG92 126 aa1.82□□□□□ -2.12
SEMA3A-202ENST00000420047 SFTA2Q6UW10 78 aa1.82□□□□□ -2.12
SEMA3A-202ENST00000420047 SMIM11BQ8TCY0 68 aa1.82□□□□□ -2.12
SEMA3A-202ENST00000420047 CRCT1Q9UGL9 99 aa1.82□□□□□ -2.12
SEMA3A-202ENST00000420047 ELOF1P60002 83 aaKnown RBP1.81□□□□□ -2.12
SEMA3A-202ENST00000420047 CXCL6P80162 114 aa1.81□□□□□ -2.12
SEMA3A-202ENST00000420047 SPANXCQ9NY87 97 aa1.81□□□□□ -2.12
SEMA3A-202ENST00000420047 LAMTOR3Q9UHA4 124 aa1.81□□□□□ -2.12
SEMA3A-202ENST00000420047 TEX49A0A1B0GTD5 131 aa1.8□□□□□ -2.12
SEMA3A-202ENST00000420047 HINT1P49773 126 aaPredicted RBP1.8□□□□□ -2.12
SEMA3A-202ENST00000420047 S100A12P80511 92 aa1.8□□□□□ -2.12
SEMA3A-202ENST00000420047 JOSD1Q15040 202 aaPredicted RBP1.8□□□□□ -2.12
SEMA3A-202ENST00000420047 SCGB1D4Q6XE38 83 aa1.8□□□□□ -2.12
SEMA3A-202ENST00000420047 C12orf57Q99622 126 aa1.8□□□□□ -2.12
SEMA3A-202ENST00000420047 A4D1N5 150 aa1.79□□□□□ -2.12
SEMA3A-202ENST00000420047 H3BUT2 72 aa1.79□□□□□ -2.12
SEMA3A-202ENST00000420047 TIMM17BO60830 172 aa1.79□□□□□ -2.12
SEMA3A-202ENST00000420047 AKR1D1P51857 326 aa1.79□□□□□ -2.12
SEMA3A-202ENST00000420047 RPS29P62273 56 aaKnown RBP1.79□□□□□ -2.12
SEMA3A-202ENST00000420047 CTAG1AP78358 180 aa1.79□□□□□ -2.12
SEMA3A-202ENST00000420047 Q6Q795 121 aa1.79□□□□□ -2.12
SEMA3A-202ENST00000420047 SPANXDQ9BXN6 97 aa1.79□□□□□ -2.12
SEMA3A-202ENST00000420047 PRO1933Q9H354 126 aa1.79□□□□□ -2.12
SEMA3A-202ENST00000420047 M0R2T5 61 aa1.78□□□□□ -2.12
SEMA3A-202ENST00000420047 RPL37P61927 97 aaKnown RBP1.78□□□□□ -2.12
SEMA3A-202ENST00000420047 COA6Q5JTJ3 125 aaKnown RBP1.78□□□□□ -2.12
SEMA3A-202ENST00000420047 IGFL1Q6UW32 110 aa1.78□□□□□ -2.12
SEMA3A-202ENST00000420047 LINC00575Q6W349 94 aa1.78□□□□□ -2.12
SEMA3A-202ENST00000420047 IGLV5-48A0A075B6I7 105 aa1.77□□□□□ -2.13
SEMA3A-202ENST00000420047 A0A1B0GWB2 263 aa1.77□□□□□ -2.13
SEMA3A-202ENST00000420047 Q6ZQY7 126 aa1.77□□□□□ -2.13
SEMA3A-202ENST00000420047 HIST3H2BBQ8N257 126 aa1.77□□□□□ -2.13
SEMA3A-202ENST00000420047 C14orf144Q96I85 54 aa1.77□□□□□ -2.13
SEMA3A-202ENST00000420047 OBSCN-AS1Q96MR7 158 aa1.77□□□□□ -2.13
SEMA3A-202ENST00000420047 HIST1H2BLQ99880 126 aa1.77□□□□□ -2.13
SEMA3A-202ENST00000420047 A0A1B0GV72 72 aa1.76□□□□□ -2.13
SEMA3A-202ENST00000420047 hADV29S1A0JD25 119 aa1.76□□□□□ -2.13
SEMA3A-202ENST00000420047 C20orf202A1L168 122 aa1.76□□□□□ -2.13
SEMA3A-202ENST00000420047 IFITM1P13164 125 aa1.76□□□□□ -2.13
SEMA3A-202ENST00000420047 CD164Q04900 197 aa1.76□□□□□ -2.13
SEMA3A-202ENST00000420047 DEFB116Q30KQ4 102 aa1.76□□□□□ -2.13
SEMA3A-202ENST00000420047 OCIAD2Q56VL3 154 aa1.76□□□□□ -2.13
SEMA3A-202ENST00000420047 COX6B2Q6YFQ2 88 aa1.76□□□□□ -2.13
SEMA3A-202ENST00000420047 Q96NJ1 140 aa1.76□□□□□ -2.13
SEMA3A-202ENST00000420047 LIMD2Q9BT23 127 aa1.76□□□□□ -2.13
SEMA3A-202ENST00000420047 TRAV13-2A0A0B4J235 113 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms