RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 FAM229AH3BQW9 127 aa8.62□□□□□ -1.03
SHMT1P1-201ENST00000419974 Q5VSD8 79 aa8.62□□□□□ -1.03
SHMT1P1-201ENST00000419974 MTURNQ8N3F0 131 aa8.62□□□□□ -1.03
SHMT1P1-201ENST00000419974 ST20-AS1Q8NBB2 130 aa8.62□□□□□ -1.03
SHMT1P1-201ENST00000419974 SPRR4Q96PI1 79 aa8.62□□□□□ -1.03
SHMT1P1-201ENST00000419974 SPINK6Q6UWN8 80 aa8.61□□□□□ -1.03
SHMT1P1-201ENST00000419974 SMIM29Q86T20 159 aa8.6□□□□□ -1.03
SHMT1P1-201ENST00000419974 SMR3BP02814 79 aaPredicted RBP8.59□□□□□ -1.03
SHMT1P1-201ENST00000419974 NDUFV3P56181 108 aaKnown RBP8.59□□□□□ -1.03
SHMT1P1-201ENST00000419974 C21orf62-AS1Q17RA5 79 aa8.59□□□□□ -1.03
SHMT1P1-201ENST00000419974 IGLV8-61A0A075B6I0 122 aa8.58□□□□□ -1.04
SHMT1P1-201ENST00000419974 PLA2G1BP04054 148 aaKnown RBP8.58□□□□□ -1.04
SHMT1P1-201ENST00000419974 ETDBQ3ZM63 59 aa8.58□□□□□ -1.04
SHMT1P1-201ENST00000419974 DEFB105AQ8NG35 78 aa8.56□□□□□ -1.04
SHMT1P1-201ENST00000419974 PDE6GP18545 87 aa8.55□□□□□ -1.04
SHMT1P1-201ENST00000419974 FAM229BQ4G0N7 80 aa8.55□□□□□ -1.04
SHMT1P1-201ENST00000419974 LAMTOR3Q9UHA4 124 aa8.55□□□□□ -1.04
SHMT1P1-201ENST00000419974 RBM3P98179 157 aaKnown RBP8.54□□□□□ -1.04
SHMT1P1-201ENST00000419974 GAGE2AQ6NT46 116 aa8.54□□□□□ -1.04
SHMT1P1-201ENST00000419974 HERC1Q15751 4861 aa8.54□□□□□ -1.04
SHMT1P1-201ENST00000419974 MYCBP2O75592 4640 aa8.54□□□□□ -1.04
SHMT1P1-201ENST00000419974 LOC110117498A0A087WWA1 95 aa8.54□□□□□ -1.04
SHMT1P1-201ENST00000419974 TRBV7-4A0A0J9YYF1 115 aa8.54□□□□□ -1.04
SHMT1P1-201ENST00000419974 KRTAP1-4P0C5Y4 121 aa8.52□□□□□ -1.05
SHMT1P1-201ENST00000419974 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
SHMT1P1-201ENST00000419974 PKHD1L1Q86WI1 4243 aa8.51□□□□□ -1.05
SHMT1P1-201ENST00000419974 F8WEM9 126 aa8.51□□□□□ -1.05
SHMT1P1-201ENST00000419974 Q6JHZ5 121 aa8.51□□□□□ -1.05
SHMT1P1-201ENST00000419974 DSCR8Q96T75 97 aa8.51□□□□□ -1.05
SHMT1P1-201ENST00000419974 A0A1B0GW54 56 aa8.5□□□□□ -1.05
SHMT1P1-201ENST00000419974 FLG2Q5D862 2391 aaPredicted RBP8.49□□□□□ -1.05
SHMT1P1-201ENST00000419974 C3orf22Q8N5N4 141 aa8.49□□□□□ -1.05
SHMT1P1-201ENST00000419974 Q6ZQT0 140 aa8.48□□□□□ -1.05
SHMT1P1-201ENST00000419974 J3QR89 54 aa8.47□□□□□ -1.05
SHMT1P1-201ENST00000419974 FAM240AA0A1B0GVK7 77 aa8.46□□□□□ -1.06
SHMT1P1-201ENST00000419974 CCKP06307 115 aa8.46□□□□□ -1.06
SHMT1P1-201ENST00000419974 SSBP3-AS1Q7Z2R9 100 aa8.46□□□□□ -1.06
SHMT1P1-201ENST00000419974 C14orf132Q9NPU4 83 aa8.46□□□□□ -1.06
SHMT1P1-201ENST00000419974 CRYGAP11844 174 aa8.45□□□□□ -1.06
SHMT1P1-201ENST00000419974 Q6Q795 121 aa8.45□□□□□ -1.06
SHMT1P1-201ENST00000419974 Q8NBF4 154 aa8.45□□□□□ -1.06
SHMT1P1-201ENST00000419974 ACYP1P07311 99 aa8.44□□□□□ -1.06
SHMT1P1-201ENST00000419974 K7ERU9 68 aa8.43□□□□□ -1.06
SHMT1P1-201ENST00000419974 IGFL1Q6UW32 110 aa8.43□□□□□ -1.06
SHMT1P1-201ENST00000419974 KRTAP29-1A8MX34 341 aaPredicted RBP8.42□□□□□ -1.06
SHMT1P1-201ENST00000419974 ANAPC11Q9NYG5 84 aa8.42□□□□□ -1.06
SHMT1P1-201ENST00000419974 A0A087X002 238 aa8.41□□□□□ -1.06
SHMT1P1-201ENST00000419974 CD164Q04900 197 aa8.4□□□□□ -1.06
SHMT1P1-201ENST00000419974 KRTAP13-2Q52LG2 175 aa8.4□□□□□ -1.06
SHMT1P1-201ENST00000419974 IGLV9-49A0A0B4J1Y8 123 aa8.39□□□□□ -1.07
SHMT1P1-201ENST00000419974 A0A1W2PNM2 257 aa8.39□□□□□ -1.07
SHMT1P1-201ENST00000419974 J3QL48 77 aa8.38□□□□□ -1.07
SHMT1P1-201ENST00000419974 MOBPQ13875 183 aa8.38□□□□□ -1.07
SHMT1P1-201ENST00000419974 C9orf153Q5TBE3 101 aa8.38□□□□□ -1.07
SHMT1P1-201ENST00000419974 A0A1B0GV72 72 aa8.36□□□□□ -1.07
SHMT1P1-201ENST00000419974 OXTP01178 125 aa8.36□□□□□ -1.07
SHMT1P1-201ENST00000419974 FAT3Q8TDW7 4589 aa8.36□□□□□ -1.07
SHMT1P1-201ENST00000419974 LRP1Q07954 4544 aaKnown RBP8.35□□□□□ -1.07
SHMT1P1-201ENST00000419974 TRBV7-7A0A0K0K1E9 115 aa8.33□□□□□ -1.08
SHMT1P1-201ENST00000419974 Q5XG85 94 aa8.33□□□□□ -1.08
SHMT1P1-201ENST00000419974 RPS29P62273 56 aaKnown RBP8.32□□□□□ -1.08
SHMT1P1-201ENST00000419974 TYMSOSQ8TAI1 123 aa8.32□□□□□ -1.08
SHMT1P1-201ENST00000419974 SPAG11AQ6PDA7 123 aa8.31□□□□□ -1.08
SHMT1P1-201ENST00000419974 KRTAP10-8P60410 259 aa8.3□□□□□ -1.08
SHMT1P1-201ENST00000419974 PRR26Q8N8Z3 221 aa8.3□□□□□ -1.08
SHMT1P1-201ENST00000419974 LINC00846Q9NV44 126 aa8.3□□□□□ -1.08
SHMT1P1-201ENST00000419974 TNXBP22105 4242 aa8.3□□□□□ -1.08
SHMT1P1-201ENST00000419974 A0A0G2JQZ4 141 aa8.29□□□□□ -1.08
SHMT1P1-201ENST00000419974 SPINK1P00995 79 aa8.29□□□□□ -1.08
SHMT1P1-201ENST00000419974 ASB16-AS1Q495Z4 193 aa8.29□□□□□ -1.08
SHMT1P1-201ENST00000419974 VPS25Q9BRG1 176 aa8.29□□□□□ -1.08
SHMT1P1-201ENST00000419974 UBL5Q9BZL1 73 aa8.27□□□□□ -1.09
SHMT1P1-201ENST00000419974 SS18L2Q9UHA2 77 aa8.27□□□□□ -1.09
SHMT1P1-201ENST00000419974 A0A087WSZ3 146 aa8.26□□□□□ -1.09
SHMT1P1-201ENST00000419974 CDIP1Q9H305 208 aa8.26□□□□□ -1.09
SHMT1P1-201ENST00000419974 LINC00643Q86TS7 51 aa8.25□□□□□ -1.09
SHMT1P1-201ENST00000419974 Q6ZVQ6 151 aa8.24□□□□□ -1.09
SHMT1P1-201ENST00000419974 LINC00304Q8N9R0 145 aa8.24□□□□□ -1.09
SHMT1P1-201ENST00000419974 NREPQ16612 68 aa8.23□□□□□ -1.09
SHMT1P1-201ENST00000419974 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
SHMT1P1-201ENST00000419974 ATP5EP2Q5VTU8 51 aa8.22□□□□□ -1.09
SHMT1P1-201ENST00000419974 LIMD2Q9BT23 127 aa8.22□□□□□ -1.09
SHMT1P1-201ENST00000419974 HMCN2Q8NDA2 5059 aa8.21□□□□□ -1.1
SHMT1P1-201ENST00000419974 LINC00472Q9H8W2 130 aa8.21□□□□□ -1.1
SHMT1P1-201ENST00000419974 MT1HL1P0DM35 61 aa8.2□□□□□ -1.1
SHMT1P1-201ENST00000419974 CXCL6P80162 114 aa8.2□□□□□ -1.1
SHMT1P1-201ENST00000419974 J3KT08 172 aa8.18□□□□□ -1.1
SHMT1P1-201ENST00000419974 HRCT1Q6UXD1 115 aa8.18□□□□□ -1.1
SHMT1P1-201ENST00000419974 Q96NJ1 140 aa8.17□□□□□ -1.1
SHMT1P1-201ENST00000419974 IMUPQ9GZP8 106 aa8.14□□□□□ -1.11
SHMT1P1-201ENST00000419974 BPY2O14599 106 aa8.13□□□□□ -1.11
SHMT1P1-201ENST00000419974 SIGMAR1Q99720 223 aa8.13□□□□□ -1.11
SHMT1P1-201ENST00000419974 C1orf195Q5TG92 126 aa8.11□□□□□ -1.11
SHMT1P1-201ENST00000419974 DSCR10P59022 87 aa8.09□□□□□ -1.11
SHMT1P1-201ENST00000419974 A8MWP4 228 aa8.08□□□□□ -1.12
SHMT1P1-201ENST00000419974 UBR4Q5T4S7 5183 aa8.07□□□□□ -1.12
SHMT1P1-201ENST00000419974 MT-ATP8P03928 68 aa8.06□□□□□ -1.12
SHMT1P1-201ENST00000419974 IGKV4-1P06312 121 aa8.05□□□□□ -1.12
SHMT1P1-201ENST00000419974 NDUFB1O75438 58 aa8.04□□□□□ -1.12
SHMT1P1-201ENST00000419974 PRR15Q8IV56 129 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms