RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 WFDC13Q8IUB5 93 aa9.63□□□□□ -0.87
SEMA3B-203ENST00000419007 PSCAO43653 123 aa9.63□□□□□ -0.87
SEMA3B-203ENST00000419007 A0A087WSZ3 146 aa9.62□□□□□ -0.87
SEMA3B-203ENST00000419007 IGFL1Q6UW32 110 aa9.62□□□□□ -0.87
SEMA3B-203ENST00000419007 DNHD1Q96M86 4753 aa9.61□□□□□ -0.87
SEMA3B-203ENST00000419007 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.61□□□□□ -0.87
SEMA3B-203ENST00000419007 A0A096LNI7 61 aa9.61□□□□□ -0.87
SEMA3B-203ENST00000419007 HCG22E2RYF7 251 aa9.6□□□□□ -0.87
SEMA3B-203ENST00000419007 TENM2Q9NT68 2774 aa9.59□□□□□ -0.87
SEMA3B-203ENST00000419007 RPL37AP61513 92 aaKnown RBP9.58□□□□□ -0.88
SEMA3B-203ENST00000419007 CMYA5Q8N3K9 4069 aa9.57□□□□□ -0.88
SEMA3B-203ENST00000419007 UBE2AP49459 152 aa9.56□□□□□ -0.88
SEMA3B-203ENST00000419007 CSMD3Q7Z407 3707 aa9.56□□□□□ -0.88
SEMA3B-203ENST00000419007 CHTF8P0CG12 524 aa9.55□□□□□ -0.88
SEMA3B-203ENST00000419007 C1orf64Q8NEQ6 169 aa9.54□□□□□ -0.88
SEMA3B-203ENST00000419007 KRTAP1-5Q9BYS1 174 aa9.54□□□□□ -0.88
SEMA3B-203ENST00000419007 LCE6AA0A183 80 aa9.53□□□□□ -0.88
SEMA3B-203ENST00000419007 C16orf90A8MZG2 172 aa9.53□□□□□ -0.88
SEMA3B-203ENST00000419007 PHF5AQ7RTV0 110 aaKnown RBP9.52□□□□□ -0.89
SEMA3B-203ENST00000419007 hDV103S1A0JD37 113 aa9.51□□□□□ -0.89
SEMA3B-203ENST00000419007 UBE2DNLQ8IWF7 75 aa9.51□□□□□ -0.89
SEMA3B-203ENST00000419007 ZCCHC13Q8WW36 166 aaKnown RBP9.5□□□□□ -0.89
SEMA3B-203ENST00000419007 K7EIL1 84 aa9.5□□□□□ -0.89
SEMA3B-203ENST00000419007 DNAH10Q8IVF4 4471 aa9.5□□□□□ -0.89
SEMA3B-203ENST00000419007 MP68P56378 58 aa9.5□□□□□ -0.89
SEMA3B-203ENST00000419007 LINC00208Q96KT6 92 aa9.5□□□□□ -0.89
SEMA3B-203ENST00000419007 LYSTQ99698 3801 aa9.49□□□□□ -0.89
SEMA3B-203ENST00000419007 KRTAP11-1Q8IUC1 163 aa9.48□□□□□ -0.89
SEMA3B-203ENST00000419007 COL7A1Q02388 2944 aa9.46□□□□□ -0.89
SEMA3B-203ENST00000419007 PSPHP1O15172 72 aa9.45□□□□□ -0.9
SEMA3B-203ENST00000419007 CASC2Q6XLA1 102 aa9.45□□□□□ -0.9
SEMA3B-203ENST00000419007 MEGF8Q7Z7M0 2845 aa9.44□□□□□ -0.9
SEMA3B-203ENST00000419007 CNBPP62633 177 aaKnown RBP9.44□□□□□ -0.9
SEMA3B-203ENST00000419007 TGP01266 2768 aa9.44□□□□□ -0.9
SEMA3B-203ENST00000419007 DNAH1Q9P2D7 4330 aa9.44□□□□□ -0.9
SEMA3B-203ENST00000419007 IGLV8-61A0A075B6I0 122 aa9.43□□□□□ -0.9
SEMA3B-203ENST00000419007 H0Y9J4 135 aa9.43□□□□□ -0.9
SEMA3B-203ENST00000419007 NDUFB1O75438 58 aa9.42□□□□□ -0.9
SEMA3B-203ENST00000419007 HUWE1Q7Z6Z7 4374 aaKnown RBP9.42□□□□□ -0.9
SEMA3B-203ENST00000419007 H0Y9P7 68 aa9.41□□□□□ -0.9
SEMA3B-203ENST00000419007 TRAV22A0A0B4J277 110 aa9.4□□□□□ -0.9
SEMA3B-203ENST00000419007 PRR15Q8IV56 129 aa9.4□□□□□ -0.9
SEMA3B-203ENST00000419007 DNAH3Q8TD57 4116 aa9.4□□□□□ -0.91
SEMA3B-203ENST00000419007 B9D2Q9BPU9 175 aa9.39□□□□□ -0.91
SEMA3B-203ENST00000419007 KRTAP29-1A8MX34 341 aaPredicted RBP9.38□□□□□ -0.91
SEMA3B-203ENST00000419007 A8MWP4 228 aa9.37□□□□□ -0.91
SEMA3B-203ENST00000419007 C14orf177Q52M58 125 aa9.37□□□□□ -0.91
SEMA3B-203ENST00000419007 PMAIP1Q13794 54 aa9.37□□□□□ -0.91
SEMA3B-203ENST00000419007 CYP4F30PQ9H0H9 118 aa9.37□□□□□ -0.91
SEMA3B-203ENST00000419007 IGLV9-49A0A0B4J1Y8 123 aa9.36□□□□□ -0.91
SEMA3B-203ENST00000419007 Q1T7F1 81 aa9.36□□□□□ -0.91
SEMA3B-203ENST00000419007 H3BS24 57 aa9.35□□□□□ -0.91
SEMA3B-203ENST00000419007 LINC00472Q9H8W2 130 aa9.35□□□□□ -0.91
SEMA3B-203ENST00000419007 PANO1I0J062 215 aa9.34□□□□□ -0.91
SEMA3B-203ENST00000419007 DNAH9Q9NYC9 4486 aa9.34□□□□□ -0.92
SEMA3B-203ENST00000419007 C9orf163Q8N9P6 203 aa9.32□□□□□ -0.92
SEMA3B-203ENST00000419007 SPRR1BP22528 89 aa9.32□□□□□ -0.92
SEMA3B-203ENST00000419007 A8MUN3 132 aa9.32□□□□□ -0.92
SEMA3B-203ENST00000419007 APLNQ9ULZ1 77 aa9.31□□□□□ -0.92
SEMA3B-203ENST00000419007 FBN3Q75N90 2809 aa9.3□□□□□ -0.92
SEMA3B-203ENST00000419007 PRKDCP78527 4128 aaKnown RBP9.28□□□□□ -0.92
SEMA3B-203ENST00000419007 CD164Q04900 197 aa9.28□□□□□ -0.92
SEMA3B-203ENST00000419007 PCOTHQ58A44 107 aa9.27□□□□□ -0.93
SEMA3B-203ENST00000419007 MMP24-AS1A0A0U1RRL7 71 aa9.27□□□□□ -0.93
SEMA3B-203ENST00000419007 H3BPC8 53 aa9.25□□□□□ -0.93
SEMA3B-203ENST00000419007 NDUFS5O43920 106 aa9.25□□□□□ -0.93
SEMA3B-203ENST00000419007 NBDYA0A0U1RRE5 68 aa9.24□□□□□ -0.93
SEMA3B-203ENST00000419007 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.24□□□□□ -0.93
SEMA3B-203ENST00000419007 DNAH7Q8WXX0 4024 aa9.24□□□□□ -0.93
SEMA3B-203ENST00000419007 SPANXA2-OT1Q8N9U9 137 aa9.23□□□□□ -0.93
SEMA3B-203ENST00000419007 IGHV6-1A0A0B4J1U7 121 aa9.22□□□□□ -0.93
SEMA3B-203ENST00000419007 ANAPC11Q9NYG5 84 aa9.22□□□□□ -0.93
SEMA3B-203ENST00000419007 KRTAP13-1Q8IUC0 172 aa9.2□□□□□ -0.94
SEMA3B-203ENST00000419007 PRR15LQ9BU68 103 aa9.2□□□□□ -0.94
SEMA3B-203ENST00000419007 CHKB-CPT1BH3BT56 60 aa9.2□□□□□ -0.94
SEMA3B-203ENST00000419007 A8MU10 97 aa9.19□□□□□ -0.94
SEMA3B-203ENST00000419007 MOBPQ13875 183 aa9.18□□□□□ -0.94
SEMA3B-203ENST00000419007 CDK2AP2O75956 126 aa9.18□□□□□ -0.94
SEMA3B-203ENST00000419007 Q8N9P0 234 aaPredicted RBP9.18□□□□□ -0.94
SEMA3B-203ENST00000419007 Q5VV11 94 aa9.18□□□□□ -0.94
SEMA3B-203ENST00000419007 COA5Q86WW8 74 aa9.17□□□□□ -0.94
SEMA3B-203ENST00000419007 Q96NJ1 140 aa9.17□□□□□ -0.94
SEMA3B-203ENST00000419007 C8orf17Q9NRJ1 99 aa9.16□□□□□ -0.94
SEMA3B-203ENST00000419007 KRTAP21-3Q3LHN1 58 aa9.16□□□□□ -0.94
SEMA3B-203ENST00000419007 Q6ZRN7 208 aaPredicted RBP9.15□□□□□ -0.94
SEMA3B-203ENST00000419007 SPACA4Q8TDM5 124 aa9.15□□□□□ -0.94
SEMA3B-203ENST00000419007 LIMD2Q9BT23 127 aa9.14□□□□□ -0.95
SEMA3B-203ENST00000419007 SPINK6Q6UWN8 80 aa9.13□□□□□ -0.95
SEMA3B-203ENST00000419007 IGLV7-46A0A075B6I9 117 aa9.13□□□□□ -0.95
SEMA3B-203ENST00000419007 TP53AIP1Q9HCN2 124 aa9.13□□□□□ -0.95
SEMA3B-203ENST00000419007 PSORS1C2Q9UIG4 136 aa9.13□□□□□ -0.95
SEMA3B-203ENST00000419007 PLECQ15149 4684 aaKnown RBP9.12□□□□□ -0.95
SEMA3B-203ENST00000419007 A0A1B0GVX0 72 aa9.11□□□□□ -0.95
SEMA3B-203ENST00000419007 SPTSSBQ8NFR3 76 aa9.11□□□□□ -0.95
SEMA3B-203ENST00000419007 A0A087X002 238 aa9.1□□□□□ -0.95
SEMA3B-203ENST00000419007 NUPR2A6NF83 97 aa9.1□□□□□ -0.95
SEMA3B-203ENST00000419007 NOTCH2NLQ7Z3S9 236 aa9.1□□□□□ -0.95
SEMA3B-203ENST00000419007 WWC2-AS2Q96NR7 200 aa9.09□□□□□ -0.95
SEMA3B-203ENST00000419007 ZNF706Q9Y5V0 76 aaPredicted RBP9.09□□□□□ -0.95
SEMA3B-203ENST00000419007 A0A087WTM6 91 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms