RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 IGFL1Q6UW32 110 aa9.12□□□□□ -0.95
HDAC9-208ENST00000417496 C16orf90A8MZG2 172 aa9.1□□□□□ -0.95
HDAC9-208ENST00000417496 FP248Q71RG6 208 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-208ENST00000417496 A0A1B0GW54 56 aa9.09□□□□□ -0.95
HDAC9-208ENST00000417496 PHF5AQ7RTV0 110 aaKnown RBP9.08□□□□□ -0.96
HDAC9-208ENST00000417496 A0A087WSZ3 146 aa9.07□□□□□ -0.96
HDAC9-208ENST00000417496 FAM229BQ4G0N7 80 aa9.07□□□□□ -0.96
HDAC9-208ENST00000417496 UBE2DNLQ8IWF7 75 aa9.06□□□□□ -0.96
HDAC9-208ENST00000417496 CNBPP62633 177 aaKnown RBP9.05□□□□□ -0.96
HDAC9-208ENST00000417496 RPL37AP61513 92 aaKnown RBP9.05□□□□□ -0.96
HDAC9-208ENST00000417496 SMIM26A0A096LP01 95 aa9.04□□□□□ -0.96
HDAC9-208ENST00000417496 UBE2AP49459 152 aa9.03□□□□□ -0.96
HDAC9-208ENST00000417496 WFDC13Q8IUB5 93 aa9.03□□□□□ -0.96
HDAC9-208ENST00000417496 HCG22E2RYF7 251 aa9.02□□□□□ -0.97
HDAC9-208ENST00000417496 ATP5EP56381 51 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-208ENST00000417496 MPLKIPQ8TAP9 179 aa9.01□□□□□ -0.97
HDAC9-208ENST00000417496 APLNQ9ULZ1 77 aa9.01□□□□□ -0.97
HDAC9-208ENST00000417496 LINC00336Q6ZUF6 198 aa9□□□□□ -0.97
HDAC9-208ENST00000417496 PANO1I0J062 215 aa9□□□□□ -0.97
HDAC9-208ENST00000417496 LCE6AA0A183 80 aa8.99□□□□□ -0.97
HDAC9-208ENST00000417496 LRCOL1A6NCL2 159 aa8.98□□□□□ -0.97
HDAC9-208ENST00000417496 IGLV8-61A0A075B6I0 122 aa8.97□□□□□ -0.97
HDAC9-208ENST00000417496 PRR4Q16378 134 aa8.97□□□□□ -0.97
HDAC9-208ENST00000417496 PLECQ15149 4684 aaKnown RBP8.96□□□□□ -0.97
HDAC9-208ENST00000417496 ZCCHC13Q8WW36 166 aaKnown RBP8.95□□□□□ -0.98
HDAC9-208ENST00000417496 C9orf163Q8N9P6 203 aa8.94□□□□□ -0.98
HDAC9-208ENST00000417496 C14orf177Q52M58 125 aa8.92□□□□□ -0.98
HDAC9-208ENST00000417496 C1orf64Q8NEQ6 169 aa8.91□□□□□ -0.98
HDAC9-208ENST00000417496 MDFIQ99750 246 aa8.89□□□□□ -0.99
HDAC9-208ENST00000417496 NBDYA0A0U1RRE5 68 aa8.89□□□□□ -0.99
HDAC9-208ENST00000417496 hDV103S1A0JD37 113 aa8.88□□□□□ -0.99
HDAC9-208ENST00000417496 KRTAP29-1A8MX34 341 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-208ENST00000417496 H0Y9J4 135 aa8.88□□□□□ -0.99
HDAC9-208ENST00000417496 SPRR1BP22528 89 aa8.88□□□□□ -0.99
HDAC9-208ENST00000417496 LINC00208Q96KT6 92 aa8.88□□□□□ -0.99
HDAC9-208ENST00000417496 LINC00472Q9H8W2 130 aa8.88□□□□□ -0.99
HDAC9-208ENST00000417496 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-208ENST00000417496 CASC2Q6XLA1 102 aa8.87□□□□□ -0.99
HDAC9-208ENST00000417496 PRR15Q8IV56 129 aa8.87□□□□□ -0.99
HDAC9-208ENST00000417496 B9D2Q9BPU9 175 aa8.87□□□□□ -0.99
HDAC9-208ENST00000417496 IGLV9-49A0A0B4J1Y8 123 aa8.86□□□□□ -0.99
HDAC9-208ENST00000417496 Q6ZRN7 208 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-208ENST00000417496 DYNC2H1Q8NCM8 4307 aaKnown RBP8.84□□□□□ -0.99
HDAC9-208ENST00000417496 A8MWP4 228 aa8.84□□□□□ -0.99
HDAC9-208ENST00000417496 STARD9Q9P2P6 4700 aa8.84□□□□□ -0.99
HDAC9-208ENST00000417496 MP68P56378 58 aa8.84□□□□□ -0.99
HDAC9-208ENST00000417496 KRTAP13-1Q8IUC0 172 aa8.84□□□□□ -0.99
HDAC9-208ENST00000417496 BRK1Q8WUW1 75 aa8.84□□□□□ -0.99
HDAC9-208ENST00000417496 FRAS1Q86XX4 4008 aa8.83□□□□□ -1
HDAC9-208ENST00000417496 PRO0628Q9UI54 55 aa8.83□□□□□ -1
HDAC9-208ENST00000417496 TRAV22A0A0B4J277 110 aa8.81□□□□□ -1
HDAC9-208ENST00000417496 H0Y9P7 68 aa8.81□□□□□ -1
HDAC9-208ENST00000417496 ANAPC11Q9NYG5 84 aa8.81□□□□□ -1
HDAC9-208ENST00000417496 KMT2AQ03164 3969 aa8.8□□□□□ -1
HDAC9-208ENST00000417496 SPACA4Q8TDM5 124 aa8.79□□□□□ -1
HDAC9-208ENST00000417496 TGP01266 2768 aa8.79□□□□□ -1
HDAC9-208ENST00000417496 PRKDCP78527 4128 aaKnown RBP8.77□□□□□ -1.01
HDAC9-208ENST00000417496 NDUFB1O75438 58 aa8.77□□□□□ -1.01
HDAC9-208ENST00000417496 MMP24-AS1A0A0U1RRL7 71 aa8.76□□□□□ -1.01
HDAC9-208ENST00000417496 CYP4F30PQ9H0H9 118 aa8.76□□□□□ -1.01
HDAC9-208ENST00000417496 NUPR2A6NF83 97 aa8.76□□□□□ -1.01
HDAC9-208ENST00000417496 PSPHP1O15172 72 aa8.75□□□□□ -1.01
HDAC9-208ENST00000417496 Q96NJ1 140 aa8.75□□□□□ -1.01
HDAC9-208ENST00000417496 A0A087WTM6 91 aa8.75□□□□□ -1.01
HDAC9-208ENST00000417496 MOBPQ13875 183 aa8.75□□□□□ -1.01
HDAC9-208ENST00000417496 HECTD4Q9Y4D8 3996 aa8.74□□□□□ -1.01
HDAC9-208ENST00000417496 PKIGQ9Y2B9 76 aa8.74□□□□□ -1.01
HDAC9-208ENST00000417496 PSORS1C2Q9UIG4 136 aa8.73□□□□□ -1.01
HDAC9-208ENST00000417496 DNAH2Q9P225 4427 aa8.71□□□□□ -1.01
HDAC9-208ENST00000417496 VPS13DQ5THJ4 4388 aa8.71□□□□□ -1.02
HDAC9-208ENST00000417496 Q1T7F1 81 aa8.71□□□□□ -1.02
HDAC9-208ENST00000417496 MEGF8Q7Z7M0 2845 aa8.7□□□□□ -1.02
HDAC9-208ENST00000417496 FBN3Q75N90 2809 aa8.7□□□□□ -1.02
HDAC9-208ENST00000417496 RTL8CO15255 209 aa8.7□□□□□ -1.02
HDAC9-208ENST00000417496 DNAH8Q96JB1 4490 aa8.7□□□□□ -1.02
HDAC9-208ENST00000417496 IGHV6-1A0A0B4J1U7 121 aa8.69□□□□□ -1.02
HDAC9-208ENST00000417496 WWC2-AS2Q96NR7 200 aa8.69□□□□□ -1.02
HDAC9-208ENST00000417496 LINC00483Q53H64 154 aa8.68□□□□□ -1.02
HDAC9-208ENST00000417496 IGLV5-52A0A0A0MRZ9 124 aa8.67□□□□□ -1.02
HDAC9-208ENST00000417496 PCOTHQ58A44 107 aa8.67□□□□□ -1.02
HDAC9-208ENST00000417496 A0A087X002 238 aa8.66□□□□□ -1.02
HDAC9-208ENST00000417496 NOTCH2NLQ7Z3S9 236 aa8.66□□□□□ -1.02
HDAC9-208ENST00000417496 H3BPC8 53 aa8.65□□□□□ -1.02
HDAC9-208ENST00000417496 NDUFS5O43920 106 aa8.65□□□□□ -1.02
HDAC9-208ENST00000417496 C8orf17Q9NRJ1 99 aa8.65□□□□□ -1.02
HDAC9-208ENST00000417496 A8MUN3 132 aa8.64□□□□□ -1.03
HDAC9-208ENST00000417496 DNAH17Q9UFH2 4485 aa8.64□□□□□ -1.03
HDAC9-208ENST00000417496 SPANXA2-OT1Q8N9U9 137 aa8.64□□□□□ -1.03
HDAC9-208ENST00000417496 ZNF861PO60384 105 aa8.63□□□□□ -1.03
HDAC9-208ENST00000417496 ASB16-AS1Q495Z4 193 aa8.62□□□□□ -1.03
HDAC9-208ENST00000417496 A0A1B0GVX0 72 aa8.61□□□□□ -1.03
HDAC9-208ENST00000417496 SPINK6Q6UWN8 80 aa8.61□□□□□ -1.03
HDAC9-208ENST00000417496 PLAC8Q9NZF1 115 aa8.61□□□□□ -1.03
HDAC9-208ENST00000417496 ZNF706Q9Y5V0 76 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-208ENST00000417496 DNAH6Q9C0G6 4158 aa8.6□□□□□ -1.03
HDAC9-208ENST00000417496 CD164Q04900 197 aa8.6□□□□□ -1.03
HDAC9-208ENST00000417496 Q6ZR54 194 aa8.6□□□□□ -1.03
HDAC9-208ENST00000417496 A8MU10 97 aa8.58□□□□□ -1.04
HDAC9-208ENST00000417496 CDK2AP2O75956 126 aa8.58□□□□□ -1.04
HDAC9-208ENST00000417496 IGLV7-46A0A075B6I9 117 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms