RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 Q6ZRX8 168 aa9.47□□□□□ -0.89
NCKIPSD-204ENST00000416649 COL7A1Q02388 2944 aa9.47□□□□□ -0.89
NCKIPSD-204ENST00000416649 DHRS4-AS1Q9P1J3 65 aa9.47□□□□□ -0.89
NCKIPSD-204ENST00000416649 SPART-AS1P0CW21 52 aa9.46□□□□□ -0.89
NCKIPSD-204ENST00000416649 RPL37AP61513 92 aaKnown RBP9.46□□□□□ -0.89
NCKIPSD-204ENST00000416649 RBM12B-AS1Q9P1G2 102 aa9.46□□□□□ -0.89
NCKIPSD-204ENST00000416649 CMYA5Q8N3K9 4069 aa9.46□□□□□ -0.9
NCKIPSD-204ENST00000416649 Q8N9P0 234 aaPredicted RBP9.46□□□□□ -0.9
NCKIPSD-204ENST00000416649 FAM168BA1KXE4 195 aa9.45□□□□□ -0.9
NCKIPSD-204ENST00000416649 KTN1-AS1Q86SY8 53 aa9.45□□□□□ -0.9
NCKIPSD-204ENST00000416649 LINC00588Q9Y4M8 146 aa9.45□□□□□ -0.9
NCKIPSD-204ENST00000416649 TENM2Q9NT68 2774 aa9.44□□□□□ -0.9
NCKIPSD-204ENST00000416649 TNP2Q05952 138 aa9.44□□□□□ -0.9
NCKIPSD-204ENST00000416649 SPRR4Q96PI1 79 aa9.44□□□□□ -0.9
NCKIPSD-204ENST00000416649 A0A1B0GW54 56 aa9.43□□□□□ -0.9
NCKIPSD-204ENST00000416649 H0Y9P7 68 aa9.43□□□□□ -0.9
NCKIPSD-204ENST00000416649 LIMD2Q9BT23 127 aa9.43□□□□□ -0.9
NCKIPSD-204ENST00000416649 LINC00476Q8WZB0 136 aa9.42□□□□□ -0.9
NCKIPSD-204ENST00000416649 A0A087WSZ3 146 aa9.41□□□□□ -0.9
NCKIPSD-204ENST00000416649 LCA10Q71F78 164 aa9.41□□□□□ -0.9
NCKIPSD-204ENST00000416649 KRTAP26-1Q6PEX3 210 aa9.4□□□□□ -0.9
NCKIPSD-204ENST00000416649 IGLV1-50A0A075B6I6 118 aa9.35□□□□□ -0.91
NCKIPSD-204ENST00000416649 CASC2Q6XLA1 102 aa9.35□□□□□ -0.91
NCKIPSD-204ENST00000416649 IGFL1Q6UW32 110 aa9.35□□□□□ -0.91
NCKIPSD-204ENST00000416649 ATP11AUNQ6ZP68 121 aa9.35□□□□□ -0.91
NCKIPSD-204ENST00000416649 MDFIQ99750 246 aa9.35□□□□□ -0.91
NCKIPSD-204ENST00000416649 KRTAP4-16G5E9R7 235 aaPredicted RBP9.34□□□□□ -0.91
NCKIPSD-204ENST00000416649 COA5Q86WW8 74 aa9.33□□□□□ -0.92
NCKIPSD-204ENST00000416649 PCOTHQ58A44 107 aa9.32□□□□□ -0.92
NCKIPSD-204ENST00000416649 SPANXA2-OT1Q8N9U9 137 aa9.32□□□□□ -0.92
NCKIPSD-204ENST00000416649 SPAG11AQ6PDA7 123 aa9.31□□□□□ -0.92
NCKIPSD-204ENST00000416649 CASC10Q5T4H9 136 aa9.31□□□□□ -0.92
NCKIPSD-204ENST00000416649 Q75L30 129 aa9.3□□□□□ -0.92
NCKIPSD-204ENST00000416649 C11orf45Q8TAV5 145 aa9.3□□□□□ -0.92
NCKIPSD-204ENST00000416649 NDUFS5O43920 106 aa9.29□□□□□ -0.92
NCKIPSD-204ENST00000416649 PRLHP81277 87 aa9.29□□□□□ -0.92
NCKIPSD-204ENST00000416649 LYSTQ99698 3801 aa9.29□□□□□ -0.92
NCKIPSD-204ENST00000416649 DEFB131BA0A096LNP1 70 aa9.28□□□□□ -0.92
NCKIPSD-204ENST00000416649 SPRR1AP35321 89 aa9.28□□□□□ -0.92
NCKIPSD-204ENST00000416649 A6NN06 94 aa9.28□□□□□ -0.92
NCKIPSD-204ENST00000416649 K7EIL1 84 aa9.28□□□□□ -0.92
NCKIPSD-204ENST00000416649 KRTAP29-1A8MX34 341 aaPredicted RBP9.27□□□□□ -0.93
NCKIPSD-204ENST00000416649 KRTAP7-1Q8IUC3 87 aa9.26□□□□□ -0.93
NCKIPSD-204ENST00000416649 A0A096LNI7 61 aa9.26□□□□□ -0.93
NCKIPSD-204ENST00000416649 LOC101927531A0A1B0GV80 90 aa9.26□□□□□ -0.93
NCKIPSD-204ENST00000416649 H0Y9J4 135 aa9.26□□□□□ -0.93
NCKIPSD-204ENST00000416649 REG3GQ6UW15 175 aa9.26□□□□□ -0.93
NCKIPSD-204ENST00000416649 CNBPP62633 177 aaKnown RBP9.25□□□□□ -0.93
NCKIPSD-204ENST00000416649 CDC42SE1Q9NRR8 79 aa9.25□□□□□ -0.93
NCKIPSD-204ENST00000416649 C9orf163Q8N9P6 203 aa9.24□□□□□ -0.93
NCKIPSD-204ENST00000416649 H3BPC8 53 aa9.23□□□□□ -0.93
NCKIPSD-204ENST00000416649 MOBPQ13875 183 aa9.22□□□□□ -0.93
NCKIPSD-204ENST00000416649 PHF5AQ7RTV0 110 aaKnown RBP9.22□□□□□ -0.93
NCKIPSD-204ENST00000416649 C7orf65Q6ZTY9 151 aa9.22□□□□□ -0.93
NCKIPSD-204ENST00000416649 DNAH3Q8TD57 4116 aa9.22□□□□□ -0.93
NCKIPSD-204ENST00000416649 HUWE1Q7Z6Z7 4374 aaKnown RBP9.21□□□□□ -0.93
NCKIPSD-204ENST00000416649 IGKV2-24A0A0C4DH68 120 aa9.2□□□□□ -0.94
NCKIPSD-204ENST00000416649 PLA2G2DQ9UNK4 145 aa9.2□□□□□ -0.94
NCKIPSD-204ENST00000416649 DNAH10Q8IVF4 4471 aa9.2□□□□□ -0.94
NCKIPSD-204ENST00000416649 SPINK7P58062 85 aa9.19□□□□□ -0.94
NCKIPSD-204ENST00000416649 LINC01556Q5JQF7 62 aa9.19□□□□□ -0.94
NCKIPSD-204ENST00000416649 TLX1NBP0CAT3 122 aa9.18□□□□□ -0.94
NCKIPSD-204ENST00000416649 IGLV7-46A0A075B6I9 117 aa9.18□□□□□ -0.94
NCKIPSD-204ENST00000416649 A8MWP4 228 aa9.18□□□□□ -0.94
NCKIPSD-204ENST00000416649 IGLV5-37A0A075B6J1 123 aa9.17□□□□□ -0.94
NCKIPSD-204ENST00000416649 TGP01266 2768 aa9.15□□□□□ -0.94
NCKIPSD-204ENST00000416649 LINC01558Q9Y6Z2 57 aa9.13□□□□□ -0.95
NCKIPSD-204ENST00000416649 PRAC1Q96KF2 57 aa9.12□□□□□ -0.95
NCKIPSD-204ENST00000416649 DNHD1Q96M86 4753 aa9.12□□□□□ -0.95
NCKIPSD-204ENST00000416649 H3BNG1 76 aa9.11□□□□□ -0.95
NCKIPSD-204ENST00000416649 MMP24-AS1A0A0U1RRL7 71 aa9.11□□□□□ -0.95
NCKIPSD-204ENST00000416649 LINC00472Q9H8W2 130 aa9.11□□□□□ -0.95
NCKIPSD-204ENST00000416649 MEGF8Q7Z7M0 2845 aa9.09□□□□□ -0.95
NCKIPSD-204ENST00000416649 IGLV8-61A0A075B6I0 122 aa9.08□□□□□ -0.96
NCKIPSD-204ENST00000416649 C8orf87E5RJ46 101 aa9.07□□□□□ -0.96
NCKIPSD-204ENST00000416649 HRES1P13985 223 aa9.07□□□□□ -0.96
NCKIPSD-204ENST00000416649 LINC00313P59037 77 aa9.06□□□□□ -0.96
NCKIPSD-204ENST00000416649 DNAH9Q9NYC9 4486 aa9.06□□□□□ -0.96
NCKIPSD-204ENST00000416649 PRKDCP78527 4128 aaKnown RBP9.05□□□□□ -0.96
NCKIPSD-204ENST00000416649 DNAH10OSP0CZ25 163 aa9.05□□□□□ -0.96
NCKIPSD-204ENST00000416649 C4orf48Q5BLP8 95 aa9.05□□□□□ -0.96
NCKIPSD-204ENST00000416649 PRR26Q8N8Z3 221 aa9.04□□□□□ -0.96
NCKIPSD-204ENST00000416649 CHTF8P0CG12 524 aa9.04□□□□□ -0.96
NCKIPSD-204ENST00000416649 ADM2Q7Z4H4 148 aa9.04□□□□□ -0.96
NCKIPSD-204ENST00000416649 PLAC8Q9NZF1 115 aa9.03□□□□□ -0.96
NCKIPSD-204ENST00000416649 DNAH7Q8WXX0 4024 aa9.02□□□□□ -0.96
NCKIPSD-204ENST00000416649 IGHV6-1A0A0B4J1U7 121 aa9.01□□□□□ -0.97
NCKIPSD-204ENST00000416649 KRTAP11-1Q8IUC1 163 aa8.99□□□□□ -0.97
NCKIPSD-204ENST00000416649 UBE2DNLQ8IWF7 75 aa8.99□□□□□ -0.97
NCKIPSD-204ENST00000416649 IGLV9-49A0A0B4J1Y8 123 aa8.98□□□□□ -0.97
NCKIPSD-204ENST00000416649 TP53AIP1Q9HCN2 124 aa8.98□□□□□ -0.97
NCKIPSD-204ENST00000416649 KRTAP1-5Q9BYS1 174 aa8.97□□□□□ -0.97
NCKIPSD-204ENST00000416649 C8orf17Q9NRJ1 99 aa8.96□□□□□ -0.97
NCKIPSD-204ENST00000416649 PLECQ15149 4684 aaKnown RBP8.93□□□□□ -0.98
NCKIPSD-204ENST00000416649 FBN3Q75N90 2809 aa8.92□□□□□ -0.98
NCKIPSD-204ENST00000416649 CDK2AP2O75956 126 aa8.92□□□□□ -0.98
NCKIPSD-204ENST00000416649 Q6ZR54 194 aa8.92□□□□□ -0.98
NCKIPSD-204ENST00000416649 SPRR1BP22528 89 aa8.89□□□□□ -0.99
NCKIPSD-204ENST00000416649 H3BS24 57 aa8.88□□□□□ -0.99
NCKIPSD-204ENST00000416649 LINC01554Q52M75 96 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms