RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 LAMTOR3Q9UHA4 124 aa8.27□□□□□ -1.09
UBXN4-203ENST00000416538 IGLV5-48A0A075B6I7 105 aa8.26□□□□□ -1.09
UBXN4-203ENST00000416538 TRBV7-6A0A0J9YX20 115 aa8.26□□□□□ -1.09
UBXN4-203ENST00000416538 A0A1B0GWB2 263 aa8.25□□□□□ -1.09
UBXN4-203ENST00000416538 TAL2Q16559 108 aa8.25□□□□□ -1.09
UBXN4-203ENST00000416538 LIMD2Q9BT23 127 aa8.25□□□□□ -1.09
UBXN4-203ENST00000416538 TRAV13-2A0A0B4J235 113 aa8.24□□□□□ -1.09
UBXN4-203ENST00000416538 TEX49A0A1B0GTD5 131 aa8.24□□□□□ -1.09
UBXN4-203ENST00000416538 H7C2G1 150 aa8.23□□□□□ -1.09
UBXN4-203ENST00000416538 KRTAP19-2Q3LHN2 52 aa8.23□□□□□ -1.09
UBXN4-203ENST00000416538 SMIM11BQ8TCY0 68 aa8.23□□□□□ -1.09
UBXN4-203ENST00000416538 C9orf92A6NGG3 77 aa8.22□□□□□ -1.09
UBXN4-203ENST00000416538 CD164Q04900 197 aa8.21□□□□□ -1.1
UBXN4-203ENST00000416538 PRO1933Q9H354 126 aa8.21□□□□□ -1.1
UBXN4-203ENST00000416538 A4D1N5 150 aa8.2□□□□□ -1.1
UBXN4-203ENST00000416538 SCGB1D1O95968 90 aa8.2□□□□□ -1.1
UBXN4-203ENST00000416538 PCOTHQ58A44 107 aa8.18□□□□□ -1.1
UBXN4-203ENST00000416538 Q5XG85 94 aa8.18□□□□□ -1.1
UBXN4-203ENST00000416538 NHP2Q9NX24 153 aaKnown RBP8.18□□□□□ -1.1
UBXN4-203ENST00000416538 C1orf195Q5TG92 126 aa8.17□□□□□ -1.1
UBXN4-203ENST00000416538 VAMP3Q15836 100 aa8.16□□□□□ -1.1
UBXN4-203ENST00000416538 KRTAP4-2Q9BYR5 136 aa8.16□□□□□ -1.1
UBXN4-203ENST00000416538 KRTAP9-7A8MTY7 169 aa8.15□□□□□ -1.1
UBXN4-203ENST00000416538 HIST1H4GQ99525 98 aa8.13□□□□□ -1.11
UBXN4-203ENST00000416538 IGLV8-61A0A075B6I0 122 aa8.12□□□□□ -1.11
UBXN4-203ENST00000416538 COX8AP10176 69 aa8.12□□□□□ -1.11
UBXN4-203ENST00000416538 LINC00575Q6W349 94 aa8.12□□□□□ -1.11
UBXN4-203ENST00000416538 Q6ZQY7 126 aa8.11□□□□□ -1.11
UBXN4-203ENST00000416538 C12orf57Q99622 126 aa8.11□□□□□ -1.11
UBXN4-203ENST00000416538 DLEU1O43261 78 aa8.1□□□□□ -1.11
UBXN4-203ENST00000416538 MT1HP80294 61 aa8.09□□□□□ -1.11
UBXN4-203ENST00000416538 hADV29S1A0JD25 119 aa8.08□□□□□ -1.12
UBXN4-203ENST00000416538 TMA7Q9Y2S6 64 aaKnown RBP8.08□□□□□ -1.12
UBXN4-203ENST00000416538 RPL37P61927 97 aaKnown RBP8.07□□□□□ -1.12
UBXN4-203ENST00000416538 C14orf144Q96I85 54 aa8.07□□□□□ -1.12
UBXN4-203ENST00000416538 F8WEM9 126 aa8.06□□□□□ -1.12
UBXN4-203ENST00000416538 IGFL1Q6UW32 110 aa8.06□□□□□ -1.12
UBXN4-203ENST00000416538 PAM16Q9Y3D7 125 aa8.06□□□□□ -1.12
UBXN4-203ENST00000416538 SPATA45Q537H7 98 aa8.05□□□□□ -1.12
UBXN4-203ENST00000416538 BVES-AS1Q5T3Y7 98 aa8.05□□□□□ -1.12
UBXN4-203ENST00000416538 KRTAP4-11Q9BYQ6 195 aa8.05□□□□□ -1.12
UBXN4-203ENST00000416538 CLEC2BQ92478 149 aa8.04□□□□□ -1.12
UBXN4-203ENST00000416538 VAMP8Q9BV40 100 aa8.04□□□□□ -1.12
UBXN4-203ENST00000416538 TRBV7-7A0A0K0K1E9 115 aa8.03□□□□□ -1.12
UBXN4-203ENST00000416538 HIGD1BQ9P298 99 aa8.03□□□□□ -1.12
UBXN4-203ENST00000416538 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.02□□□□□ -1.13
UBXN4-203ENST00000416538 RAB37Q96AX2 223 aa8.02□□□□□ -1.13
UBXN4-203ENST00000416538 TCL1BO95988 128 aa8.01□□□□□ -1.13
UBXN4-203ENST00000416538 CFC1BP0CG36 223 aa8.01□□□□□ -1.13
UBXN4-203ENST00000416538 CFC1P0CG37 223 aa8.01□□□□□ -1.13
UBXN4-203ENST00000416538 H3BUT2 72 aa8□□□□□ -1.13
UBXN4-203ENST00000416538 OCIAD2Q56VL3 154 aa8□□□□□ -1.13
UBXN4-203ENST00000416538 Q6JHZ5 121 aa8□□□□□ -1.13
UBXN4-203ENST00000416538 PPDPFLQ8WWR9 84 aa7.99□□□□□ -1.13
UBXN4-203ENST00000416538 FLGP20930 4061 aaPredicted RBP7.99□□□□□ -1.13
UBXN4-203ENST00000416538 A0A0B4J2C4 111 aa7.98□□□□□ -1.13
UBXN4-203ENST00000416538 SNCGO76070 127 aa7.98□□□□□ -1.13
UBXN4-203ENST00000416538 C21orf62-AS1Q17RA5 79 aa7.98□□□□□ -1.13
UBXN4-203ENST00000416538 C2orf91Q6ZV80 131 aa7.98□□□□□ -1.13
UBXN4-203ENST00000416538 FAM218AQ96MZ4 157 aa7.98□□□□□ -1.13
UBXN4-203ENST00000416538 SNHG12Q9BXW3 62 aa7.98□□□□□ -1.13
UBXN4-203ENST00000416538 H0YGX0 51 aa7.96□□□□□ -1.14
UBXN4-203ENST00000416538 LCE5AQ5TCM9 118 aa7.96□□□□□ -1.14
UBXN4-203ENST00000416538 CEND1Q8N111 149 aa7.95□□□□□ -1.14
UBXN4-203ENST00000416538 KRTAP10-6P60371 365 aaPredicted RBP7.93□□□□□ -1.14
UBXN4-203ENST00000416538 OBSCN-AS1Q96MR7 158 aa7.92□□□□□ -1.14
UBXN4-203ENST00000416538 PRO1854Q9UHT4 67 aa7.92□□□□□ -1.14
UBXN4-203ENST00000416538 PYY3Q5JQD4 70 aa7.9□□□□□ -1.14
UBXN4-203ENST00000416538 FXYD2P54710 66 aa7.89□□□□□ -1.15
UBXN4-203ENST00000416538 A0A1B0GX51 115 aa7.88□□□□□ -1.15
UBXN4-203ENST00000416538 Q75L30 129 aa7.88□□□□□ -1.15
UBXN4-203ENST00000416538 LST1O00453 97 aa7.87□□□□□ -1.15
UBXN4-203ENST00000416538 NDUFV3P56181 108 aaKnown RBP7.87□□□□□ -1.15
UBXN4-203ENST00000416538 Q6Q795 121 aa7.87□□□□□ -1.15
UBXN4-203ENST00000416538 Q96NJ1 140 aa7.87□□□□□ -1.15
UBXN4-203ENST00000416538 CRCT1Q9UGL9 99 aa7.87□□□□□ -1.15
UBXN4-203ENST00000416538 FSIP2Q5CZC0 6907 aa7.87□□□□□ -1.15
UBXN4-203ENST00000416538 HSD52Q0P140 79 aa7.86□□□□□ -1.15
UBXN4-203ENST00000416538 COX6B2Q6YFQ2 88 aa7.86□□□□□ -1.15
UBXN4-203ENST00000416538 KRTAP9-3Q9BYQ3 159 aa7.86□□□□□ -1.15
UBXN4-203ENST00000416538 A0A087WSZ3 146 aa7.84□□□□□ -1.15
UBXN4-203ENST00000416538 TRIAP1O43715 76 aa7.84□□□□□ -1.15
UBXN4-203ENST00000416538 FABP2P12104 132 aa7.84□□□□□ -1.15
UBXN4-203ENST00000416538 TEN1Q86WV5 123 aa7.83□□□□□ -1.16
UBXN4-203ENST00000416538 H3BMG7 143 aa7.82□□□□□ -1.16
UBXN4-203ENST00000416538 PSMB2P49721 201 aa7.82□□□□□ -1.16
UBXN4-203ENST00000416538 UQCR10Q9UDW1 63 aa7.82□□□□□ -1.16
UBXN4-203ENST00000416538 SS18L2Q9UHA2 77 aa7.82□□□□□ -1.16
UBXN4-203ENST00000416538 A0A1W2PNM2 257 aa7.81□□□□□ -1.16
UBXN4-203ENST00000416538 M0R2T5 61 aa7.81□□□□□ -1.16
UBXN4-203ENST00000416538 C20orf166-AS1Q96NR2 134 aa7.81□□□□□ -1.16
UBXN4-203ENST00000416538 K7ERJ3 54 aa7.8□□□□□ -1.16
UBXN4-203ENST00000416538 DNAL4O96015 105 aa7.8□□□□□ -1.16
UBXN4-203ENST00000416538 COX6CP09669 75 aa7.8□□□□□ -1.16
UBXN4-203ENST00000416538 A8MUU9 505 aa7.79□□□□□ -1.16
UBXN4-203ENST00000416538 ATP11AUNQ6ZP68 121 aa7.79□□□□□ -1.16
UBXN4-203ENST00000416538 H3BQ85 93 aa7.78□□□□□ -1.16
UBXN4-203ENST00000416538 A0A1B0GV72 72 aa7.77□□□□□ -1.17
UBXN4-203ENST00000416538 DSCR10P59022 87 aa7.77□□□□□ -1.17
UBXN4-203ENST00000416538 ORMDL1Q9P0S3 153 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms