RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 COL7A1Q02388 2944 aa9.25□□□□□ -0.93
LINC00475-202ENST00000416438 PHF5AQ7RTV0 110 aaKnown RBP9.24□□□□□ -0.93
LINC00475-202ENST00000416438 FAM229BQ4G0N7 80 aa9.23□□□□□ -0.93
LINC00475-202ENST00000416438 A0A087WSZ3 146 aa9.23□□□□□ -0.93
LINC00475-202ENST00000416438 SMIM26A0A096LP01 95 aa9.23□□□□□ -0.93
LINC00475-202ENST00000416438 ATP5EP56381 51 aaPredicted RBP9.21□□□□□ -0.94
LINC00475-202ENST00000416438 CNBPP62633 177 aaKnown RBP9.21□□□□□ -0.94
LINC00475-202ENST00000416438 UBE2DNLQ8IWF7 75 aa9.21□□□□□ -0.94
LINC00475-202ENST00000416438 SRRM2Q9UQ35 2752 aaKnown RBP9.2□□□□□ -0.94
LINC00475-202ENST00000416438 RPL37AP61513 92 aaKnown RBP9.2□□□□□ -0.94
LINC00475-202ENST00000416438 UBE2AP49459 152 aa9.19□□□□□ -0.94
LINC00475-202ENST00000416438 HCG22E2RYF7 251 aa9.19□□□□□ -0.94
LINC00475-202ENST00000416438 WFDC13Q8IUB5 93 aa9.19□□□□□ -0.94
LINC00475-202ENST00000416438 LCE6AA0A183 80 aa9.17□□□□□ -0.94
LINC00475-202ENST00000416438 TENM2Q9NT68 2774 aa9.17□□□□□ -0.94
LINC00475-202ENST00000416438 LINC00336Q6ZUF6 198 aa9.16□□□□□ -0.94
LINC00475-202ENST00000416438 APLNQ9ULZ1 77 aa9.16□□□□□ -0.94
LINC00475-202ENST00000416438 MPLKIPQ8TAP9 179 aa9.15□□□□□ -0.94
LINC00475-202ENST00000416438 DNAH7Q8WXX0 4024 aa9.15□□□□□ -0.95
LINC00475-202ENST00000416438 IGLV8-61A0A075B6I0 122 aa9.14□□□□□ -0.95
LINC00475-202ENST00000416438 ZCCHC13Q8WW36 166 aaKnown RBP9.13□□□□□ -0.95
LINC00475-202ENST00000416438 PANO1I0J062 215 aa9.12□□□□□ -0.95
LINC00475-202ENST00000416438 LRCOL1A6NCL2 159 aa9.12□□□□□ -0.95
LINC00475-202ENST00000416438 PRR4Q16378 134 aa9.11□□□□□ -0.95
LINC00475-202ENST00000416438 MDFIQ99750 246 aa9.1□□□□□ -0.95
LINC00475-202ENST00000416438 C9orf163Q8N9P6 203 aa9.09□□□□□ -0.95
LINC00475-202ENST00000416438 C14orf177Q52M58 125 aa9.08□□□□□ -0.96
LINC00475-202ENST00000416438 PLECQ15149 4684 aaKnown RBP9.08□□□□□ -0.96
LINC00475-202ENST00000416438 SPRR1BP22528 89 aa9.06□□□□□ -0.96
LINC00475-202ENST00000416438 C1orf64Q8NEQ6 169 aa9.06□□□□□ -0.96
LINC00475-202ENST00000416438 hDV103S1A0JD37 113 aa9.05□□□□□ -0.96
LINC00475-202ENST00000416438 KRTAP29-1A8MX34 341 aaPredicted RBP9.05□□□□□ -0.96
LINC00475-202ENST00000416438 H0Y9J4 135 aa9.05□□□□□ -0.96
LINC00475-202ENST00000416438 B9D2Q9BPU9 175 aa9.04□□□□□ -0.96
LINC00475-202ENST00000416438 LINC00472Q9H8W2 130 aa9.04□□□□□ -0.96
LINC00475-202ENST00000416438 NBDYA0A0U1RRE5 68 aa9.03□□□□□ -0.96
LINC00475-202ENST00000416438 PRR15Q8IV56 129 aa9.03□□□□□ -0.96
LINC00475-202ENST00000416438 CASC2Q6XLA1 102 aa9.03□□□□□ -0.96
LINC00475-202ENST00000416438 LINC00208Q96KT6 92 aa9.03□□□□□ -0.96
LINC00475-202ENST00000416438 DYNC2H1Q8NCM8 4307 aaKnown RBP9.01□□□□□ -0.97
LINC00475-202ENST00000416438 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.01□□□□□ -0.97
LINC00475-202ENST00000416438 MP68P56378 58 aa9.01□□□□□ -0.97
LINC00475-202ENST00000416438 Q6ZRN7 208 aaPredicted RBP9.01□□□□□ -0.97
LINC00475-202ENST00000416438 A8MWP4 228 aa9□□□□□ -0.97
LINC00475-202ENST00000416438 IGLV9-49A0A0B4J1Y8 123 aa9□□□□□ -0.97
LINC00475-202ENST00000416438 PRO0628Q9UI54 55 aa9□□□□□ -0.97
LINC00475-202ENST00000416438 KRTAP13-1Q8IUC0 172 aa8.99□□□□□ -0.97
LINC00475-202ENST00000416438 BRK1Q8WUW1 75 aa8.99□□□□□ -0.97
LINC00475-202ENST00000416438 TRAV22A0A0B4J277 110 aa8.98□□□□□ -0.97
LINC00475-202ENST00000416438 H0Y9P7 68 aa8.97□□□□□ -0.97
LINC00475-202ENST00000416438 NUPR2A6NF83 97 aa8.95□□□□□ -0.98
LINC00475-202ENST00000416438 CYP4F30PQ9H0H9 118 aa8.94□□□□□ -0.98
LINC00475-202ENST00000416438 NDUFB1O75438 58 aa8.94□□□□□ -0.98
LINC00475-202ENST00000416438 SPACA4Q8TDM5 124 aa8.94□□□□□ -0.98
LINC00475-202ENST00000416438 MMP24-AS1A0A0U1RRL7 71 aa8.93□□□□□ -0.98
LINC00475-202ENST00000416438 STARD9Q9P2P6 4700 aa8.92□□□□□ -0.98
LINC00475-202ENST00000416438 ANAPC11Q9NYG5 84 aa8.92□□□□□ -0.98
LINC00475-202ENST00000416438 Q96NJ1 140 aa8.91□□□□□ -0.98
LINC00475-202ENST00000416438 FRAS1Q86XX4 4008 aa8.9□□□□□ -0.98
LINC00475-202ENST00000416438 PKIGQ9Y2B9 76 aa8.9□□□□□ -0.99
LINC00475-202ENST00000416438 PSPHP1O15172 72 aa8.89□□□□□ -0.99
LINC00475-202ENST00000416438 A0A087WTM6 91 aa8.89□□□□□ -0.99
LINC00475-202ENST00000416438 MOBPQ13875 183 aa8.89□□□□□ -0.99
LINC00475-202ENST00000416438 Q1T7F1 81 aa8.88□□□□□ -0.99
LINC00475-202ENST00000416438 PRKDCP78527 4128 aaKnown RBP8.87□□□□□ -0.99
LINC00475-202ENST00000416438 PSORS1C2Q9UIG4 136 aa8.87□□□□□ -0.99
LINC00475-202ENST00000416438 VPS13DQ5THJ4 4388 aa8.86□□□□□ -0.99
LINC00475-202ENST00000416438 KMT2AQ03164 3969 aa8.85□□□□□ -0.99
LINC00475-202ENST00000416438 DNAH8Q96JB1 4490 aa8.85□□□□□ -0.99
LINC00475-202ENST00000416438 H3BPC8 53 aa8.84□□□□□ -0.99
LINC00475-202ENST00000416438 RTL8CO15255 209 aa8.84□□□□□ -0.99
LINC00475-202ENST00000416438 LINC00483Q53H64 154 aa8.84□□□□□ -0.99
LINC00475-202ENST00000416438 WWC2-AS2Q96NR7 200 aa8.84□□□□□ -0.99
LINC00475-202ENST00000416438 IGHV6-1A0A0B4J1U7 121 aa8.83□□□□□ -1
LINC00475-202ENST00000416438 PCOTHQ58A44 107 aa8.82□□□□□ -1
LINC00475-202ENST00000416438 IGLV5-52A0A0A0MRZ9 124 aa8.82□□□□□ -1
LINC00475-202ENST00000416438 SPANXA2-OT1Q8N9U9 137 aa8.82□□□□□ -1
LINC00475-202ENST00000416438 C8orf17Q9NRJ1 99 aa8.82□□□□□ -1
LINC00475-202ENST00000416438 MEGF8Q7Z7M0 2845 aa8.82□□□□□ -1
LINC00475-202ENST00000416438 DNAH2Q9P225 4427 aa8.81□□□□□ -1
LINC00475-202ENST00000416438 HECTD4Q9Y4D8 3996 aa8.8□□□□□ -1
LINC00475-202ENST00000416438 A8MUN3 132 aa8.8□□□□□ -1
LINC00475-202ENST00000416438 A0A087X002 238 aa8.8□□□□□ -1
LINC00475-202ENST00000416438 NDUFS5O43920 106 aa8.8□□□□□ -1
LINC00475-202ENST00000416438 NOTCH2NLQ7Z3S9 236 aa8.8□□□□□ -1
LINC00475-202ENST00000416438 ASB16-AS1Q495Z4 193 aa8.79□□□□□ -1
LINC00475-202ENST00000416438 ZNF861PO60384 105 aa8.78□□□□□ -1
LINC00475-202ENST00000416438 DNAH17Q9UFH2 4485 aa8.78□□□□□ -1
LINC00475-202ENST00000416438 ZNF706Q9Y5V0 76 aaPredicted RBP8.77□□□□□ -1.01
LINC00475-202ENST00000416438 A0A1B0GVX0 72 aa8.77□□□□□ -1.01
LINC00475-202ENST00000416438 PLAC8Q9NZF1 115 aa8.76□□□□□ -1.01
LINC00475-202ENST00000416438 CD164Q04900 197 aa8.75□□□□□ -1.01
LINC00475-202ENST00000416438 CDK2AP2O75956 126 aa8.74□□□□□ -1.01
LINC00475-202ENST00000416438 SPINK6Q6UWN8 80 aa8.74□□□□□ -1.01
LINC00475-202ENST00000416438 Q6ZR54 194 aa8.74□□□□□ -1.01
LINC00475-202ENST00000416438 TGP01266 2768 aa8.74□□□□□ -1.01
LINC00475-202ENST00000416438 IGLV7-46A0A075B6I9 117 aa8.74□□□□□ -1.01
LINC00475-202ENST00000416438 Q8N9P0 234 aaPredicted RBP8.74□□□□□ -1.01
LINC00475-202ENST00000416438 TP53AIP1Q9HCN2 124 aa8.73□□□□□ -1.01
LINC00475-202ENST00000416438 COA5Q86WW8 74 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms