RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 TGP01266 2768 aa13.29□□□□□ -0.28
AP1S3-205ENST00000415298 LINC01558Q9Y6Z2 57 aa13.29□□□□□ -0.28
AP1S3-205ENST00000415298 ASB16-AS1Q495Z4 193 aa13.28□□□□□ -0.28
AP1S3-205ENST00000415298 ADM2Q7Z4H4 148 aa13.28□□□□□ -0.28
AP1S3-205ENST00000415298 IGLV6-57P01721 117 aa13.28□□□□□ -0.28
AP1S3-205ENST00000415298 TRGV4A0A0C4DH28 118 aa13.27□□□□□ -0.29
AP1S3-205ENST00000415298 PLAC8Q9NZF1 115 aa13.27□□□□□ -0.29
AP1S3-205ENST00000415298 SPINK7P58062 85 aa13.24□□□□□ -0.29
AP1S3-205ENST00000415298 H0Y9J4 135 aa13.23□□□□□ -0.29
AP1S3-205ENST00000415298 COA5Q86WW8 74 aa13.23□□□□□ -0.29
AP1S3-205ENST00000415298 SPAG11BQ08648 103 aa13.21□□□□□ -0.29
AP1S3-205ENST00000415298 LINC00959A0A1B0GUT2 108 aa13.19□□□□□ -0.3
AP1S3-205ENST00000415298 A0A1B0GW54 56 aa13.19□□□□□ -0.3
AP1S3-205ENST00000415298 PRO0255Q9UI72 69 aa13.19□□□□□ -0.3
AP1S3-205ENST00000415298 RETNLBQ9BQ08 111 aa13.18□□□□□ -0.3
AP1S3-205ENST00000415298 A0A087X002 238 aa13.17□□□□□ -0.3
AP1S3-205ENST00000415298 ZNF706Q9Y5V0 76 aaPredicted RBP13.17□□□□□ -0.3
AP1S3-205ENST00000415298 DEFB131BA0A096LNP1 70 aa13.17□□□□□ -0.3
AP1S3-205ENST00000415298 A0A096LPF7 62 aa13.17□□□□□ -0.3
AP1S3-205ENST00000415298 LINC00476Q8WZB0 136 aa13.17□□□□□ -0.3
AP1S3-205ENST00000415298 CSMD3Q7Z407 3707 aa13.17□□□□□ -0.3
AP1S3-205ENST00000415298 GYPEP15421 78 aa13.16□□□□□ -0.3
AP1S3-205ENST00000415298 CNBPP62633 177 aaKnown RBP13.15□□□□□ -0.3
AP1S3-205ENST00000415298 H3BPC8 53 aa13.15□□□□□ -0.3
AP1S3-205ENST00000415298 DSCR10P59022 87 aa13.14□□□□□ -0.31
AP1S3-205ENST00000415298 K7EQZ3 153 aa13.12□□□□□ -0.31
AP1S3-205ENST00000415298 SPAG11AQ6PDA7 123 aa13.11□□□□□ -0.31
AP1S3-205ENST00000415298 C9orf163Q8N9P6 203 aa13.08□□□□□ -0.32
AP1S3-205ENST00000415298 TENM2Q9NT68 2774 aa13.07□□□□□ -0.32
AP1S3-205ENST00000415298 DNAH7Q8WXX0 4024 aa13.06□□□□□ -0.32
AP1S3-205ENST00000415298 LYSTQ99698 3801 aa13.06□□□□□ -0.32
AP1S3-205ENST00000415298 A0A1W2PNM2 257 aa13.05□□□□□ -0.32
AP1S3-205ENST00000415298 RTL8CO15255 209 aa13.04□□□□□ -0.32
AP1S3-205ENST00000415298 H0Y9P7 68 aa13.03□□□□□ -0.32
AP1S3-205ENST00000415298 STARD9Q9P2P6 4700 aa13.03□□□□□ -0.32
AP1S3-205ENST00000415298 IGLV5-48A0A075B6I7 105 aa13.02□□□□□ -0.32
AP1S3-205ENST00000415298 IGLV7-46A0A075B6I9 117 aa13.02□□□□□ -0.33
AP1S3-205ENST00000415298 H3BNG1 76 aa13.01□□□□□ -0.33
AP1S3-205ENST00000415298 PLECQ15149 4684 aaKnown RBP12.99□□□□□ -0.33
AP1S3-205ENST00000415298 IGKV2D-24A0A075B6R9 120 aa12.98□□□□□ -0.33
AP1S3-205ENST00000415298 LINC00528Q8N1L1 170 aa12.98□□□□□ -0.33
AP1S3-205ENST00000415298 DYNC2H1Q8NCM8 4307 aaKnown RBP12.97□□□□□ -0.33
AP1S3-205ENST00000415298 DEFB116Q30KQ4 102 aa12.95□□□□□ -0.34
AP1S3-205ENST00000415298 WFDC13Q8IUB5 93 aa12.94□□□□□ -0.34
AP1S3-205ENST00000415298 CSAG1Q6PB30 78 aa12.93□□□□□ -0.34
AP1S3-205ENST00000415298 APLNQ9ULZ1 77 aa12.93□□□□□ -0.34
AP1S3-205ENST00000415298 NUPR2A6NF83 97 aa12.92□□□□□ -0.34
AP1S3-205ENST00000415298 Q8NBF4 154 aa12.92□□□□□ -0.34
AP1S3-205ENST00000415298 IGHV6-1A0A0B4J1U7 121 aa12.91□□□□□ -0.34
AP1S3-205ENST00000415298 WWC2-AS2Q96NR7 200 aa12.91□□□□□ -0.34
AP1S3-205ENST00000415298 LELP1Q5T871 98 aa12.9□□□□□ -0.34
AP1S3-205ENST00000415298 WFDC10BQ8IUB3 73 aa12.9□□□□□ -0.34
AP1S3-205ENST00000415298 SPRR4Q96PI1 79 aa12.9□□□□□ -0.34
AP1S3-205ENST00000415298 A0A1B0GUV1 79 aa12.89□□□□□ -0.35
AP1S3-205ENST00000415298 C1orf134Q5TEV5 83 aa12.89□□□□□ -0.35
AP1S3-205ENST00000415298 CLPSL2Q6UWE3 100 aa12.89□□□□□ -0.35
AP1S3-205ENST00000415298 UNQ6190/PRO20217Q6UXQ8 127 aa12.88□□□□□ -0.35
AP1S3-205ENST00000415298 Q6ZR54 194 aa12.88□□□□□ -0.35
AP1S3-205ENST00000415298 A0A0A0MQY5 61 aa12.87□□□□□ -0.35
AP1S3-205ENST00000415298 Q8N377 158 aa12.87□□□□□ -0.35
AP1S3-205ENST00000415298 IGLV1-50A0A075B6I6 118 aa12.87□□□□□ -0.35
AP1S3-205ENST00000415298 C1orf137Q5JT78 98 aa12.86□□□□□ -0.35
AP1S3-205ENST00000415298 KRTAP29-1A8MX34 341 aaPredicted RBP12.84□□□□□ -0.35
AP1S3-205ENST00000415298 DEFB105AQ8NG35 78 aa12.84□□□□□ -0.35
AP1S3-205ENST00000415298 DNAH1Q9P2D7 4330 aa12.83□□□□□ -0.36
AP1S3-205ENST00000415298 CASC10Q5T4H9 136 aa12.82□□□□□ -0.36
AP1S3-205ENST00000415298 CHCHD10Q8WYQ3 142 aaPredicted RBP12.82□□□□□ -0.36
AP1S3-205ENST00000415298 XAGE1AQ9HD64 81 aa12.79□□□□□ -0.36
AP1S3-205ENST00000415298 ANGP03950 147 aaKnown RBP12.79□□□□□ -0.36
AP1S3-205ENST00000415298 TNP2Q05952 138 aa12.78□□□□□ -0.36
AP1S3-205ENST00000415298 UBE2DNLQ8IWF7 75 aa12.78□□□□□ -0.36
AP1S3-205ENST00000415298 C7orf33Q8WU49 177 aa12.77□□□□□ -0.37
AP1S3-205ENST00000415298 IGLV5-37A0A075B6J1 123 aa12.76□□□□□ -0.37
AP1S3-205ENST00000415298 ROMO1P60602 79 aa12.76□□□□□ -0.37
AP1S3-205ENST00000415298 GVQW2A0A096LPI5 108 aaPredicted RBP12.75□□□□□ -0.37
AP1S3-205ENST00000415298 VPS13DQ5THJ4 4388 aa12.74□□□□□ -0.37
AP1S3-205ENST00000415298 KMT2AQ03164 3969 aa12.74□□□□□ -0.37
AP1S3-205ENST00000415298 DNAH10OSP0CZ25 163 aa12.73□□□□□ -0.37
AP1S3-205ENST00000415298 IGLV10-54A0A075B6I4 117 aa12.73□□□□□ -0.37
AP1S3-205ENST00000415298 LINC01556Q5JQF7 62 aa12.73□□□□□ -0.37
AP1S3-205ENST00000415298 HRES1P13985 223 aa12.72□□□□□ -0.37
AP1S3-205ENST00000415298 REG3AQ06141 175 aa12.72□□□□□ -0.37
AP1S3-205ENST00000415298 SPATA8Q6RVD6 105 aa12.71□□□□□ -0.37
AP1S3-205ENST00000415298 KRTAP1-5Q9BYS1 174 aa12.7□□□□□ -0.38
AP1S3-205ENST00000415298 PRR34Q9NV39 138 aa12.68□□□□□ -0.38
AP1S3-205ENST00000415298 PCOTHQ58A44 107 aa12.67□□□□□ -0.38
AP1S3-205ENST00000415298 LY6G6CO95867 125 aa12.67□□□□□ -0.38
AP1S3-205ENST00000415298 DNAH10Q8IVF4 4471 aa12.66□□□□□ -0.38
AP1S3-205ENST00000415298 C6orf48Q9UBA6 75 aa12.65□□□□□ -0.38
AP1S3-205ENST00000415298 HYDINQ4G0P3 5121 aa12.62□□□□□ -0.39
AP1S3-205ENST00000415298 REG3GQ6UW15 175 aa12.61□□□□□ -0.39
AP1S3-205ENST00000415298 NBDYA0A0U1RRE5 68 aa12.6□□□□□ -0.39
AP1S3-205ENST00000415298 DHRS4-AS1Q9P1J3 65 aa12.59□□□□□ -0.39
AP1S3-205ENST00000415298 RPL37AP61513 92 aaKnown RBP12.58□□□□□ -0.4
AP1S3-205ENST00000415298 KRTAP26-1Q6PEX3 210 aa12.58□□□□□ -0.4
AP1S3-205ENST00000415298 DNAH2Q9P225 4427 aa12.55□□□□□ -0.4
AP1S3-205ENST00000415298 MIR22HGQ0VDD5 57 aa12.54□□□□□ -0.4
AP1S3-205ENST00000415298 SACSQ9NZJ4 4579 aa12.54□□□□□ -0.4
AP1S3-205ENST00000415298 ALMS1Q8TCU4 4167 aa12.52□□□□□ -0.4
AP1S3-205ENST00000415298 KMT2CQ8NEZ4 4911 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms