RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 LAMTOR3Q9UHA4 124 aa9.83□□□□□ -0.84
SHMT2-202ENST00000414700 A0A1W2PNN7 141 aa9.83□□□□□ -0.84
SHMT2-202ENST00000414700 KRTAP10-1P60331 282 aa9.82□□□□□ -0.84
SHMT2-202ENST00000414700 DYNC1H1Q14204 4646 aaKnown RBP9.82□□□□□ -0.84
SHMT2-202ENST00000414700 TRBV7-4A0A0J9YYF1 115 aa9.81□□□□□ -0.84
SHMT2-202ENST00000414700 H3BQ85 93 aa9.81□□□□□ -0.84
SHMT2-202ENST00000414700 SPACA4Q8TDM5 124 aa9.81□□□□□ -0.84
SHMT2-202ENST00000414700 FAM30AQ9NZY2 134 aa9.8□□□□□ -0.84
SHMT2-202ENST00000414700 PLA2G2DQ9UNK4 145 aa9.79□□□□□ -0.84
SHMT2-202ENST00000414700 LINC00474Q9P2X8 69 aa9.78□□□□□ -0.84
SHMT2-202ENST00000414700 PKIGQ9Y2B9 76 aa9.78□□□□□ -0.84
SHMT2-202ENST00000414700 ERC2-IT1O76042 136 aa9.77□□□□□ -0.85
SHMT2-202ENST00000414700 NREPQ16612 68 aa9.77□□□□□ -0.85
SHMT2-202ENST00000414700 NKAPP1Q8N9T2 125 aa9.77□□□□□ -0.85
SHMT2-202ENST00000414700 C7orf33Q8WU49 177 aa9.76□□□□□ -0.85
SHMT2-202ENST00000414700 IGLV5-37A0A075B6J1 123 aa9.75□□□□□ -0.85
SHMT2-202ENST00000414700 M0R378 163 aa9.75□□□□□ -0.85
SHMT2-202ENST00000414700 RPL37AP8A6NKH3 93 aa9.74□□□□□ -0.85
SHMT2-202ENST00000414700 PHF5AQ7RTV0 110 aaKnown RBP9.74□□□□□ -0.85
SHMT2-202ENST00000414700 MRPL55Q7Z7F7 128 aaKnown RBP9.74□□□□□ -0.85
SHMT2-202ENST00000414700 TMEM254Q8TBM7 123 aa9.74□□□□□ -0.85
SHMT2-202ENST00000414700 BRK1Q8WUW1 75 aa9.74□□□□□ -0.85
SHMT2-202ENST00000414700 IGLV6-57P01721 117 aa9.73□□□□□ -0.85
SHMT2-202ENST00000414700 Q6ZQY7 126 aa9.73□□□□□ -0.85
SHMT2-202ENST00000414700 Q6ZSA8 131 aa9.73□□□□□ -0.85
SHMT2-202ENST00000414700 EPPK1P58107 5090 aaKnown RBP9.72□□□□□ -0.85
SHMT2-202ENST00000414700 SCXQ7RTU7 201 aa9.72□□□□□ -0.85
SHMT2-202ENST00000414700 KRTAP11-1Q8IUC1 163 aa9.72□□□□□ -0.85
SHMT2-202ENST00000414700 APOBP04114 4563 aaKnown RBP9.71□□□□□ -0.85
SHMT2-202ENST00000414700 BPY2O14599 106 aa9.71□□□□□ -0.86
SHMT2-202ENST00000414700 C1orf195Q5TG92 126 aa9.7□□□□□ -0.86
SHMT2-202ENST00000414700 CIRBP-AS1Q8TBR5 109 aa9.7□□□□□ -0.86
SHMT2-202ENST00000414700 PLAC8Q9NZF1 115 aa9.7□□□□□ -0.86
SHMT2-202ENST00000414700 IGLV1-50A0A075B6I6 118 aa9.69□□□□□ -0.86
SHMT2-202ENST00000414700 PRYO14603 147 aa9.68□□□□□ -0.86
SHMT2-202ENST00000414700 FAM229BQ4G0N7 80 aa9.68□□□□□ -0.86
SHMT2-202ENST00000414700 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-202ENST00000414700 A0A0U1RQV1 116 aa9.66□□□□□ -0.86
SHMT2-202ENST00000414700 V9GYY9 64 aa9.66□□□□□ -0.86
SHMT2-202ENST00000414700 DIRC1Q969H9 104 aa9.66□□□□□ -0.86
SHMT2-202ENST00000414700 SRRM2Q9UQ35 2752 aaKnown RBP9.66□□□□□ -0.86
SHMT2-202ENST00000414700 MPLKIPQ8TAP9 179 aa9.65□□□□□ -0.86
SHMT2-202ENST00000414700 KCNQ1DNQ9H478 68 aa9.65□□□□□ -0.86
SHMT2-202ENST00000414700 VPS13BQ7Z7G8 4022 aa9.65□□□□□ -0.86
SHMT2-202ENST00000414700 UBE2BP63146 152 aa9.65□□□□□ -0.87
SHMT2-202ENST00000414700 ZNF73O43830 326 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-202ENST00000414700 COX7BP24311 80 aa9.64□□□□□ -0.87
SHMT2-202ENST00000414700 OCR1Q9BZK8 76 aa9.64□□□□□ -0.87
SHMT2-202ENST00000414700 IGKV4-1P06312 121 aa9.63□□□□□ -0.87
SHMT2-202ENST00000414700 KRTAP4-16G5E9R7 235 aaPredicted RBP9.6□□□□□ -0.87
SHMT2-202ENST00000414700 SPRR1AP35321 89 aa9.6□□□□□ -0.87
SHMT2-202ENST00000414700 ELOF1P60002 83 aaKnown RBP9.6□□□□□ -0.87
SHMT2-202ENST00000414700 SEC61GP60059 68 aa9.6□□□□□ -0.87
SHMT2-202ENST00000414700 REG3GQ6UW15 175 aa9.6□□□□□ -0.87
SHMT2-202ENST00000414700 FAT1Q14517 4588 aa9.59□□□□□ -0.87
SHMT2-202ENST00000414700 Q8N9L7 120 aa9.58□□□□□ -0.88
SHMT2-202ENST00000414700 PSORS1C2Q9UIG4 136 aa9.58□□□□□ -0.88
SHMT2-202ENST00000414700 HSPG2P98160 4391 aa9.57□□□□□ -0.88
SHMT2-202ENST00000414700 PRLHP81277 87 aa9.55□□□□□ -0.88
SHMT2-202ENST00000414700 HIGD2AQ9BW72 106 aa9.55□□□□□ -0.88
SHMT2-202ENST00000414700 ETDCA0A1B0GVM5 59 aa9.55□□□□□ -0.88
SHMT2-202ENST00000414700 SMR3BP02814 79 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-202ENST00000414700 LINC00528Q8N1L1 170 aa9.54□□□□□ -0.88
SHMT2-202ENST00000414700 KIAA1109Q2LD37 5005 aa9.54□□□□□ -0.88
SHMT2-202ENST00000414700 Q6ZRX8 168 aa9.53□□□□□ -0.88
SHMT2-202ENST00000414700 PRR15Q8IV56 129 aa9.53□□□□□ -0.88
SHMT2-202ENST00000414700 hDV103S1A0JD37 113 aa9.53□□□□□ -0.88
SHMT2-202ENST00000414700 Q9BRP9 147 aa9.53□□□□□ -0.88
SHMT2-202ENST00000414700 C1orf137Q5JT78 98 aa9.52□□□□□ -0.89
SHMT2-202ENST00000414700 RYR1P21817 5038 aa9.51□□□□□ -0.89
SHMT2-202ENST00000414700 Q1T7F1 81 aa9.49□□□□□ -0.89
SHMT2-202ENST00000414700 KRTAP13-1Q8IUC0 172 aa9.49□□□□□ -0.89
SHMT2-202ENST00000414700 UBE2AP49459 152 aa9.48□□□□□ -0.89
SHMT2-202ENST00000414700 SMIM29Q86T20 159 aa9.46□□□□□ -0.89
SHMT2-202ENST00000414700 H0Y9J4 135 aa9.44□□□□□ -0.9
SHMT2-202ENST00000414700 CDK2AP2O75956 126 aa9.44□□□□□ -0.9
SHMT2-202ENST00000414700 IGLV7-43P04211 117 aa9.44□□□□□ -0.9
SHMT2-202ENST00000414700 A0A1B0GW54 56 aa9.43□□□□□ -0.9
SHMT2-202ENST00000414700 PMAIP1Q13794 54 aa9.43□□□□□ -0.9
SHMT2-202ENST00000414700 C1orf64Q8NEQ6 169 aa9.43□□□□□ -0.9
SHMT2-202ENST00000414700 ZCCHC13Q8WW36 166 aaKnown RBP9.43□□□□□ -0.9
SHMT2-202ENST00000414700 DHRS4-AS1Q9P1J3 65 aa9.43□□□□□ -0.9
SHMT2-202ENST00000414700 ST20-AS1Q8NBB2 130 aa9.43□□□□□ -0.9
SHMT2-202ENST00000414700 KRTAP17-1Q9BYP8 105 aa9.43□□□□□ -0.9
SHMT2-202ENST00000414700 ZNF861PO60384 105 aa9.42□□□□□ -0.9
SHMT2-202ENST00000414700 RPL37AP61513 92 aaKnown RBP9.41□□□□□ -0.9
SHMT2-202ENST00000414700 IGLV5-48A0A075B6I7 105 aa9.4□□□□□ -0.9
SHMT2-202ENST00000414700 KRTAP10-4P60372 401 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-202ENST00000414700 CYP4F30PQ9H0H9 118 aa9.39□□□□□ -0.91
SHMT2-202ENST00000414700 DEFB105AQ8NG35 78 aa9.38□□□□□ -0.91
SHMT2-202ENST00000414700 Q8N377 158 aa9.37□□□□□ -0.91
SHMT2-202ENST00000414700 TRAV22A0A0B4J277 110 aa9.36□□□□□ -0.91
SHMT2-202ENST00000414700 PSPHP1O15172 72 aa9.34□□□□□ -0.91
SHMT2-202ENST00000414700 BIRC6Q9NR09 4857 aa9.34□□□□□ -0.91
SHMT2-202ENST00000414700 A0A1W2PNM2 257 aa9.34□□□□□ -0.91
SHMT2-202ENST00000414700 Q5VSD8 79 aa9.32□□□□□ -0.92
SHMT2-202ENST00000414700 ANAPC11Q9NYG5 84 aa9.32□□□□□ -0.92
SHMT2-202ENST00000414700 DSCR10P59022 87 aa9.31□□□□□ -0.92
SHMT2-202ENST00000414700 Q8NBF4 154 aa9.31□□□□□ -0.92
SHMT2-202ENST00000414700 SPRR4Q96PI1 79 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms