RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 C16orf74Q96GX8 76 aa2.56□□□□□ -2
LINC01048-201ENST00000414480 LINC00167Q96N53 147 aa2.56□□□□□ -2
LINC01048-201ENST00000414480 GAFA1Q96PS6 74 aa2.56□□□□□ -2
LINC01048-201ENST00000414480 A0A087WSZ3 146 aa2.55□□□□□ -2
LINC01048-201ENST00000414480 IGHV3-64DA0A0J9YX35 117 aa2.55□□□□□ -2
LINC01048-201ENST00000414480 A0A0J9YX75 114 aa2.55□□□□□ -2
LINC01048-201ENST00000414480 LYZP61626 148 aa2.55□□□□□ -2
LINC01048-201ENST00000414480 NDPQ00604 133 aa2.55□□□□□ -2
LINC01048-201ENST00000414480 C10orf113Q5VZT2 155 aa2.55□□□□□ -2
LINC01048-201ENST00000414480 NTM-AS1Q6ZSK4 140 aa2.55□□□□□ -2
LINC01048-201ENST00000414480 KLHL30-AS1Q8NEE0 82 aa2.55□□□□□ -2
LINC01048-201ENST00000414480 DMAC1Q96GE9 116 aa2.55□□□□□ -2
LINC01048-201ENST00000414480 NDUFAF8A1L188 74 aa2.54□□□□□ -2
LINC01048-201ENST00000414480 H0Y9P7 68 aa2.54□□□□□ -2
LINC01048-201ENST00000414480 H0YGX0 51 aa2.54□□□□□ -2
LINC01048-201ENST00000414480 IGLV1-47P01700 117 aa2.54□□□□□ -2
LINC01048-201ENST00000414480 IGLV7-43P04211 117 aa2.54□□□□□ -2
LINC01048-201ENST00000414480 MGPP08493 103 aa2.54□□□□□ -2
LINC01048-201ENST00000414480 RNASE3P12724 160 aaKnown RBP2.54□□□□□ -2
LINC01048-201ENST00000414480 LINC00483Q53H64 154 aa2.54□□□□□ -2
LINC01048-201ENST00000414480 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.54□□□□□ -2
LINC01048-201ENST00000414480 LINC01558Q9Y6Z2 57 aa2.54□□□□□ -2
LINC01048-201ENST00000414480 DYNC1H1Q14204 4646 aaKnown RBP2.53□□□□□ -2
LINC01048-201ENST00000414480 A0A1W2PNM2 257 aa2.53□□□□□ -2
LINC01048-201ENST00000414480 A8MUU9 505 aa2.53□□□□□ -2
LINC01048-201ENST00000414480 H3BQ85 93 aa2.53□□□□□ -2
LINC01048-201ENST00000414480 RTL8CO15255 209 aa2.53□□□□□ -2
LINC01048-201ENST00000414480 MRPL33O75394 65 aaKnown RBP2.53□□□□□ -2
LINC01048-201ENST00000414480 PATE4P0C8F1 98 aa2.53□□□□□ -2
LINC01048-201ENST00000414480 SPINT4Q6UDR6 99 aa2.53□□□□□ -2
LINC01048-201ENST00000414480 LINC00322Q6ZN03 302 aaPredicted RBP2.53□□□□□ -2
LINC01048-201ENST00000414480 Q6ZR54 194 aa2.53□□□□□ -2
LINC01048-201ENST00000414480 OBSCN-AS1Q96MR7 158 aa2.53□□□□□ -2
LINC01048-201ENST00000414480 AMELXQ99217 191 aa2.53□□□□□ -2
LINC01048-201ENST00000414480 HSPG2P98160 4391 aa2.53□□□□□ -2
LINC01048-201ENST00000414480 PKHD1P08F94 4074 aa2.52□□□□□ -2.01
LINC01048-201ENST00000414480 IGHV3-64A0A075B6Q5 118 aa2.52□□□□□ -2.01
LINC01048-201ENST00000414480 IGIPA6NJ69 53 aa2.52□□□□□ -2.01
LINC01048-201ENST00000414480 IGHV3-53P01767 116 aa2.52□□□□□ -2.01
LINC01048-201ENST00000414480 PDE6GP18545 87 aa2.52□□□□□ -2.01
LINC01048-201ENST00000414480 C1orf137Q5JT78 98 aa2.52□□□□□ -2.01
LINC01048-201ENST00000414480 C9orf47Q6ZRZ4 202 aa2.52□□□□□ -2.01
LINC01048-201ENST00000414480 Q86TA4 180 aa2.52□□□□□ -2.01
LINC01048-201ENST00000414480 ZNF625Q96I27 306 aaPredicted RBP2.52□□□□□ -2.01
LINC01048-201ENST00000414480 DNAH11Q96DT5 4516 aa2.52□□□□□ -2.01
LINC01048-201ENST00000414480 IGLV2-18A0A075B6J9 118 aa2.51□□□□□ -2.01
LINC01048-201ENST00000414480 NUPR2A6NF83 97 aa2.51□□□□□ -2.01
LINC01048-201ENST00000414480 ODF3BA8MYP8 253 aa2.51□□□□□ -2.01
LINC01048-201ENST00000414480 NDUFA4O00483 81 aa2.51□□□□□ -2.01
LINC01048-201ENST00000414480 UQCR11O14957 56 aa2.51□□□□□ -2.01
LINC01048-201ENST00000414480 IGKV1-17P01599 117 aa2.51□□□□□ -2.01
LINC01048-201ENST00000414480 PDE6HQ13956 83 aa2.51□□□□□ -2.01
LINC01048-201ENST00000414480 KRTAP25-1Q3LHN0 102 aa2.51□□□□□ -2.01
LINC01048-201ENST00000414480 SPANXA2-OT1Q8N9U9 137 aa2.51□□□□□ -2.01
LINC01048-201ENST00000414480 CNFNQ9BYD5 112 aa2.51□□□□□ -2.01
LINC01048-201ENST00000414480 DMBT1Q9UGM3 2413 aaPredicted RBP2.5□□□□□ -2.01
LINC01048-201ENST00000414480 A0A1B0GVY2 172 aa2.5□□□□□ -2.01
LINC01048-201ENST00000414480 NCR3O14931 201 aa2.5□□□□□ -2.01
LINC01048-201ENST00000414480 P0C880 135 aa2.5□□□□□ -2.01
LINC01048-201ENST00000414480 MT3P25713 68 aa2.5□□□□□ -2.01
LINC01048-201ENST00000414480 VPS13DQ5THJ4 4388 aa2.49□□□□□ -2.01
LINC01048-201ENST00000414480 FAT2Q9NYQ8 4349 aa2.49□□□□□ -2.01
LINC01048-201ENST00000414480 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
LINC01048-201ENST00000414480 C15orf56Q8N910 161 aa2.49□□□□□ -2.01
LINC01048-201ENST00000414480 DNAH2Q9P225 4427 aa2.49□□□□□ -2.01
LINC01048-201ENST00000414480 CTSGP08311 255 aa2.48□□□□□ -2.01
LINC01048-201ENST00000414480 CCL18P55774 89 aa2.48□□□□□ -2.01
LINC01048-201ENST00000414480 SPINK7P58062 85 aa2.48□□□□□ -2.01
LINC01048-201ENST00000414480 PRCDQ00LT1 54 aa2.48□□□□□ -2.01
LINC01048-201ENST00000414480 SPINK9Q5DT21 86 aa2.48□□□□□ -2.01
LINC01048-201ENST00000414480 KLK9Q9UKQ9 250 aa2.48□□□□□ -2.01
LINC01048-201ENST00000414480 TRGV4A0A0C4DH28 118 aa2.47□□□□□ -2.01
LINC01048-201ENST00000414480 ETDCA0A1B0GVM5 59 aa2.47□□□□□ -2.01
LINC01048-201ENST00000414480 LY6G6CO95867 125 aa2.47□□□□□ -2.01
LINC01048-201ENST00000414480 CCL3L1P16619 93 aa2.47□□□□□ -2.01
LINC01048-201ENST00000414480 KRTAP5-9P26371 169 aa2.47□□□□□ -2.01
LINC01048-201ENST00000414480 CRIP1P50238 77 aa2.47□□□□□ -2.01
LINC01048-201ENST00000414480 DEFB116Q30KQ4 102 aa2.47□□□□□ -2.01
LINC01048-201ENST00000414480 COA5Q86WW8 74 aa2.47□□□□□ -2.01
LINC01048-201ENST00000414480 RNF5Q99942 180 aa2.47□□□□□ -2.01
LINC01048-201ENST00000414480 SMIM2Q9BVW6 85 aa2.47□□□□□ -2.01
LINC01048-201ENST00000414480 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
LINC01048-201ENST00000414480 IGKV3-7A0A075B6H7 116 aa2.46□□□□□ -2.02
LINC01048-201ENST00000414480 H3BUX3 64 aa2.46□□□□□ -2.02
LINC01048-201ENST00000414480 IGKV3-20P01619 116 aa2.46□□□□□ -2.02
LINC01048-201ENST00000414480 PRB3Q04118 309 aaPredicted RBP2.46□□□□□ -2.02
LINC01048-201ENST00000414480 LY6EQ16553 131 aa2.46□□□□□ -2.02
LINC01048-201ENST00000414480 KLK12Q9UKR0 248 aa2.46□□□□□ -2.02
LINC01048-201ENST00000414480 LOC110117498A0A087WWA1 95 aa2.45□□□□□ -2.02
LINC01048-201ENST00000414480 A0A087WYN8 130 aa2.45□□□□□ -2.02
LINC01048-201ENST00000414480 PANO1I0J062 215 aa2.45□□□□□ -2.02
LINC01048-201ENST00000414480 CNBPP62633 177 aaKnown RBP2.45□□□□□ -2.02
LINC01048-201ENST00000414480 HCP5Q6MZN7 132 aa2.45□□□□□ -2.02
LINC01048-201ENST00000414480 C10orf99Q6UWK7 81 aa2.45□□□□□ -2.02
LINC01048-201ENST00000414480 Q8N377 158 aa2.45□□□□□ -2.02
LINC01048-201ENST00000414480 C4orf3Q8WVX3 66 aa2.45□□□□□ -2.02
LINC01048-201ENST00000414480 SORL1Q92673 2214 aa2.45□□□□□ -2.02
LINC01048-201ENST00000414480 APOBP04114 4563 aaKnown RBP2.44□□□□□ -2.02
LINC01048-201ENST00000414480 IGLV4-69A0A075B6H9 119 aa2.44□□□□□ -2.02
LINC01048-201ENST00000414480 TRGV2A0A075B6R0 118 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms