RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
UPF3AP1-201ENST00000413731 C2orf91Q6ZV80 131 aa4.8□□□□□ -1.64
UPF3AP1-201ENST00000413731 HIST1H4GQ99525 98 aa4.8□□□□□ -1.64
UPF3AP1-201ENST00000413731 RETNLBQ9BQ08 111 aa4.8□□□□□ -1.64
UPF3AP1-201ENST00000413731 OCR1Q9BZK8 76 aa4.8□□□□□ -1.64
UPF3AP1-201ENST00000413731 PPDPFQ9H3Y8 114 aa4.8□□□□□ -1.64
UPF3AP1-201ENST00000413731 IGLV7-46A0A075B6I9 117 aa4.79□□□□□ -1.64
UPF3AP1-201ENST00000413731 TRAV13-2A0A0B4J235 113 aa4.79□□□□□ -1.64
UPF3AP1-201ENST00000413731 COX7BP24311 80 aa4.79□□□□□ -1.64
UPF3AP1-201ENST00000413731 C6orf99Q4VX62 202 aa4.79□□□□□ -1.64
UPF3AP1-201ENST00000413731 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
UPF3AP1-201ENST00000413731 Q9BRP9 147 aa4.79□□□□□ -1.64
UPF3AP1-201ENST00000413731 ERC2-IT1O76042 136 aa4.78□□□□□ -1.64
UPF3AP1-201ENST00000413731 SMIM6P0DI80 62 aa4.78□□□□□ -1.64
UPF3AP1-201ENST00000413731 LCE5AQ5TCM9 118 aa4.78□□□□□ -1.64
UPF3AP1-201ENST00000413731 LINC00304Q8N9R0 145 aa4.78□□□□□ -1.64
UPF3AP1-201ENST00000413731 C12orf57Q99622 126 aa4.78□□□□□ -1.64
UPF3AP1-201ENST00000413731 HIGD1BQ9P298 99 aa4.78□□□□□ -1.64
UPF3AP1-201ENST00000413731 C3orf22Q8N5N4 141 aa4.77□□□□□ -1.65
UPF3AP1-201ENST00000413731 Q8NBF4 154 aa4.77□□□□□ -1.65
UPF3AP1-201ENST00000413731 PRO1933Q9H354 126 aa4.77□□□□□ -1.65
UPF3AP1-201ENST00000413731 DHRS4-AS1Q9P1J3 65 aa4.77□□□□□ -1.65
UPF3AP1-201ENST00000413731 FSIP2Q5CZC0 6907 aa4.76□□□□□ -1.65
UPF3AP1-201ENST00000413731 ELOF1P60002 83 aaKnown RBP4.76□□□□□ -1.65
UPF3AP1-201ENST00000413731 UQCR10Q9UDW1 63 aa4.76□□□□□ -1.65
UPF3AP1-201ENST00000413731 A0A1B0GWB2 263 aa4.75□□□□□ -1.65
UPF3AP1-201ENST00000413731 MOBPQ13875 183 aa4.75□□□□□ -1.65
UPF3AP1-201ENST00000413731 TPRXLQ17RH7 258 aa4.75□□□□□ -1.65
UPF3AP1-201ENST00000413731 LINC00483Q53H64 154 aa4.75□□□□□ -1.65
UPF3AP1-201ENST00000413731 C9orf153Q5TBE3 101 aa4.75□□□□□ -1.65
UPF3AP1-201ENST00000413731 NOTCH2NLQ7Z3S9 236 aa4.75□□□□□ -1.65
UPF3AP1-201ENST00000413731 ST20-AS1Q8NBB2 130 aa4.75□□□□□ -1.65
UPF3AP1-201ENST00000413731 TRBV7-6A0A0J9YX20 115 aa4.74□□□□□ -1.65
UPF3AP1-201ENST00000413731 TAL2Q16559 108 aa4.74□□□□□ -1.65
UPF3AP1-201ENST00000413731 CEND1Q8N111 149 aa4.74□□□□□ -1.65
UPF3AP1-201ENST00000413731 SMIM11BQ8TCY0 68 aa4.74□□□□□ -1.65
UPF3AP1-201ENST00000413731 FXYD2P54710 66 aa4.73□□□□□ -1.65
UPF3AP1-201ENST00000413731 HSD52Q0P140 79 aa4.73□□□□□ -1.65
UPF3AP1-201ENST00000413731 Q8N9P0 234 aaPredicted RBP4.73□□□□□ -1.65
UPF3AP1-201ENST00000413731 RAB37Q96AX2 223 aa4.73□□□□□ -1.65
UPF3AP1-201ENST00000413731 NHP2Q9NX24 153 aaKnown RBP4.73□□□□□ -1.65
UPF3AP1-201ENST00000413731 H7C2G1 150 aa4.72□□□□□ -1.65
UPF3AP1-201ENST00000413731 SLC25A20O43772 301 aa4.72□□□□□ -1.65
UPF3AP1-201ENST00000413731 CFC1BP0CG36 223 aa4.72□□□□□ -1.65
UPF3AP1-201ENST00000413731 CFC1P0CG37 223 aa4.72□□□□□ -1.65
UPF3AP1-201ENST00000413731 VAMP3Q15836 100 aa4.72□□□□□ -1.65
UPF3AP1-201ENST00000413731 DEFB105AQ8NG35 78 aa4.72□□□□□ -1.65
UPF3AP1-201ENST00000413731 Q1RN00 199 aa4.71□□□□□ -1.66
UPF3AP1-201ENST00000413731 A0A0B4J2C4 111 aa4.7□□□□□ -1.66
UPF3AP1-201ENST00000413731 SPAG11AQ6PDA7 123 aa4.7□□□□□ -1.66
UPF3AP1-201ENST00000413731 CRCT1Q9UGL9 99 aa4.7□□□□□ -1.66
UPF3AP1-201ENST00000413731 LAMTOR3Q9UHA4 124 aa4.7□□□□□ -1.66
UPF3AP1-201ENST00000413731 TEX49A0A1B0GTD5 131 aa4.69□□□□□ -1.66
UPF3AP1-201ENST00000413731 TSTD3H0UI37 97 aa4.69□□□□□ -1.66
UPF3AP1-201ENST00000413731 K7ERJ3 54 aa4.69□□□□□ -1.66
UPF3AP1-201ENST00000413731 SPRR1BP22528 89 aa4.69□□□□□ -1.66
UPF3AP1-201ENST00000413731 BVES-AS1Q5T3Y7 98 aa4.69□□□□□ -1.66
UPF3AP1-201ENST00000413731 CTAG1AP78358 180 aa4.68□□□□□ -1.66
UPF3AP1-201ENST00000413731 SSBP3-AS1Q7Z2R9 100 aa4.68□□□□□ -1.66
UPF3AP1-201ENST00000413731 KRTAP4-1Q9BYQ7 146 aa4.68□□□□□ -1.66
UPF3AP1-201ENST00000413731 F8WEM9 126 aa4.67□□□□□ -1.66
UPF3AP1-201ENST00000413731 SPINK1P00995 79 aa4.67□□□□□ -1.66
UPF3AP1-201ENST00000413731 LINC00575Q6W349 94 aa4.67□□□□□ -1.66
UPF3AP1-201ENST00000413731 Q6ZQY7 126 aa4.67□□□□□ -1.66
UPF3AP1-201ENST00000413731 PRO1854Q9UHT4 67 aa4.67□□□□□ -1.66
UPF3AP1-201ENST00000413731 IGLV5-48A0A075B6I7 105 aa4.66□□□□□ -1.66
UPF3AP1-201ENST00000413731 hADV29S1A0JD25 119 aa4.66□□□□□ -1.66
UPF3AP1-201ENST00000413731 M0R143 59 aa4.65□□□□□ -1.67
UPF3AP1-201ENST00000413731 ASB16-AS1Q495Z4 193 aa4.65□□□□□ -1.67
UPF3AP1-201ENST00000413731 HRCT1Q6UXD1 115 aa4.65□□□□□ -1.67
UPF3AP1-201ENST00000413731 SNCGO76070 127 aa4.64□□□□□ -1.67
UPF3AP1-201ENST00000413731 KRTAP13-3Q3SY46 172 aa4.64□□□□□ -1.67
UPF3AP1-201ENST00000413731 H0YGX0 51 aa4.63□□□□□ -1.67
UPF3AP1-201ENST00000413731 PSMB2P49721 201 aa4.63□□□□□ -1.67
UPF3AP1-201ENST00000413731 RPS29P62273 56 aaKnown RBP4.63□□□□□ -1.67
UPF3AP1-201ENST00000413731 BATFQ16520 125 aa4.63□□□□□ -1.67
UPF3AP1-201ENST00000413731 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.63□□□□□ -1.67
UPF3AP1-201ENST00000413731 FP248Q71RG6 208 aaPredicted RBP4.63□□□□□ -1.67
UPF3AP1-201ENST00000413731 Q8N377 158 aa4.63□□□□□ -1.67
UPF3AP1-201ENST00000413731 LIMD2Q9BT23 127 aa4.63□□□□□ -1.67
UPF3AP1-201ENST00000413731 PPDPFLQ8WWR9 84 aa4.61□□□□□ -1.67
UPF3AP1-201ENST00000413731 CLEC2BQ92478 149 aa4.61□□□□□ -1.67
UPF3AP1-201ENST00000413731 NAA38Q9BRA0 125 aaKnown RBP4.61□□□□□ -1.67
UPF3AP1-201ENST00000413731 DNAL4O96015 105 aa4.6□□□□□ -1.67
UPF3AP1-201ENST00000413731 COX6CP09669 75 aa4.6□□□□□ -1.67
UPF3AP1-201ENST00000413731 OCIAD2Q56VL3 154 aa4.6□□□□□ -1.67
UPF3AP1-201ENST00000413731 SNHG12Q9BXW3 62 aa4.6□□□□□ -1.67
UPF3AP1-201ENST00000413731 A0A0G2JQZ4 141 aa4.59□□□□□ -1.67
UPF3AP1-201ENST00000413731 A0A1B0GX51 115 aa4.59□□□□□ -1.67
UPF3AP1-201ENST00000413731 NDUFAF8A1L188 74 aa4.59□□□□□ -1.67
UPF3AP1-201ENST00000413731 CD164Q04900 197 aa4.59□□□□□ -1.67
UPF3AP1-201ENST00000413731 KRTAP5-3Q6L8H2 238 aa4.59□□□□□ -1.67
UPF3AP1-201ENST00000413731 FABP2P12104 132 aa4.58□□□□□ -1.68
UPF3AP1-201ENST00000413731 Q6JHZ5 121 aa4.58□□□□□ -1.68
UPF3AP1-201ENST00000413731 H3BUT2 72 aa4.57□□□□□ -1.68
UPF3AP1-201ENST00000413731 SCGB1C2P0DMR2 95 aa4.57□□□□□ -1.68
UPF3AP1-201ENST00000413731 KRTAP19-2Q3LHN2 52 aa4.56□□□□□ -1.68
UPF3AP1-201ENST00000413731 IGFL1Q6UW32 110 aa4.56□□□□□ -1.68
UPF3AP1-201ENST00000413731 IGLV8-61A0A075B6I0 122 aa4.55□□□□□ -1.68
UPF3AP1-201ENST00000413731 TCL1BO95988 128 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms