RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 COPS9Q8WXC6 57 aa6.18□□□□□ -1.42
LIMS2-210ENST00000413578 LCE2BO14633 110 aa6.17□□□□□ -1.42
LIMS2-210ENST00000413578 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
LIMS2-210ENST00000413578 C20orf166-AS1Q96NR2 134 aa6.17□□□□□ -1.42
LIMS2-210ENST00000413578 SYNE2Q8WXH0 6885 aaKnown RBP6.16□□□□□ -1.42
LIMS2-210ENST00000413578 TRAV13-2A0A0B4J235 113 aa6.16□□□□□ -1.42
LIMS2-210ENST00000413578 HIST1H2BKO60814 126 aa6.16□□□□□ -1.42
LIMS2-210ENST00000413578 HIST1H2BJP06899 126 aa6.16□□□□□ -1.42
LIMS2-210ENST00000413578 HIST1H2BOP23527 126 aa6.16□□□□□ -1.42
LIMS2-210ENST00000413578 HIST1H2BBP33778 126 aa6.16□□□□□ -1.42
LIMS2-210ENST00000413578 HIST1H2BDP58876 126 aa6.16□□□□□ -1.42
LIMS2-210ENST00000413578 HIST1H2BCP62807 126 aa6.16□□□□□ -1.42
LIMS2-210ENST00000413578 HIST2H2BEQ16778 126 aa6.16□□□□□ -1.42
LIMS2-210ENST00000413578 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.16□□□□□ -1.42
LIMS2-210ENST00000413578 LINC00575Q6W349 94 aa6.16□□□□□ -1.42
LIMS2-210ENST00000413578 HIST1H2BHQ93079 126 aa6.16□□□□□ -1.42
LIMS2-210ENST00000413578 HIST1H2BNQ99877 126 aa6.16□□□□□ -1.42
LIMS2-210ENST00000413578 HIST1H2BMQ99879 126 aa6.16□□□□□ -1.42
LIMS2-210ENST00000413578 A8MUU9 505 aa6.15□□□□□ -1.42
LIMS2-210ENST00000413578 C3orf79P0CE67 100 aa6.15□□□□□ -1.42
LIMS2-210ENST00000413578 ANKRD39Q53RE8 183 aa6.15□□□□□ -1.42
LIMS2-210ENST00000413578 MT1FP04733 61 aa6.14□□□□□ -1.43
LIMS2-210ENST00000413578 OCIAD2Q56VL3 154 aa6.14□□□□□ -1.43
LIMS2-210ENST00000413578 Q6ZQY7 126 aa6.14□□□□□ -1.43
LIMS2-210ENST00000413578 Q96NJ1 140 aa6.14□□□□□ -1.43
LIMS2-210ENST00000413578 MACF1Q9UPN3 7388 aaKnown RBP6.13□□□□□ -1.43
LIMS2-210ENST00000413578 KRTAP9-3Q9BYQ3 159 aa6.13□□□□□ -1.43
LIMS2-210ENST00000413578 hADV29S1A0JD25 119 aa6.11□□□□□ -1.43
LIMS2-210ENST00000413578 LST1O00453 97 aa6.11□□□□□ -1.43
LIMS2-210ENST00000413578 TRBV20-1A0A075B6N2 111 aa6.09□□□□□ -1.43
LIMS2-210ENST00000413578 VAMP3Q15836 100 aa6.09□□□□□ -1.43
LIMS2-210ENST00000413578 KRTDAPP60985 99 aa6.08□□□□□ -1.44
LIMS2-210ENST00000413578 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.08□□□□□ -1.44
LIMS2-210ENST00000413578 MPLKIPQ8TAP9 179 aa6.08□□□□□ -1.44
LIMS2-210ENST00000413578 PPDPFLQ8WWR9 84 aa6.08□□□□□ -1.44
LIMS2-210ENST00000413578 KRTAP16-1A8MUX0 517 aa6.07□□□□□ -1.44
LIMS2-210ENST00000413578 COA6Q5JTJ3 125 aaKnown RBP6.07□□□□□ -1.44
LIMS2-210ENST00000413578 H3BUT2 72 aa6.06□□□□□ -1.44
LIMS2-210ENST00000413578 ATOH7Q8N100 152 aa6.06□□□□□ -1.44
LIMS2-210ENST00000413578 SS18L2Q9UHA2 77 aa6.05□□□□□ -1.44
LIMS2-210ENST00000413578 SCGB1D1O95968 90 aa6.03□□□□□ -1.44
LIMS2-210ENST00000413578 HRES1P13985 223 aa6.03□□□□□ -1.44
LIMS2-210ENST00000413578 KRTAP10-10P60014 251 aa6.03□□□□□ -1.44
LIMS2-210ENST00000413578 SNHG12Q9BXW3 62 aa6.03□□□□□ -1.44
LIMS2-210ENST00000413578 TMA7Q9Y2S6 64 aaKnown RBP6.03□□□□□ -1.44
LIMS2-210ENST00000413578 S100A6P06703 90 aa6.02□□□□□ -1.45
LIMS2-210ENST00000413578 DSCR10P59022 87 aa6.01□□□□□ -1.45
LIMS2-210ENST00000413578 KRTAP19-6Q3LI70 58 aa6.01□□□□□ -1.45
LIMS2-210ENST00000413578 TEN1Q86WV5 123 aa6.01□□□□□ -1.45
LIMS2-210ENST00000413578 SNRPEP62304 92 aaKnown RBP6□□□□□ -1.45
LIMS2-210ENST00000413578 BVES-AS1Q5T3Y7 98 aa6□□□□□ -1.45
LIMS2-210ENST00000413578 A0A087WSZ3 146 aa5.99□□□□□ -1.45
LIMS2-210ENST00000413578 FAM236DA0A1B0GTK5 79 aa5.99□□□□□ -1.45
LIMS2-210ENST00000413578 FAM236CP0DP71 79 aa5.99□□□□□ -1.45
LIMS2-210ENST00000413578 S100A2P29034 98 aa5.99□□□□□ -1.45
LIMS2-210ENST00000413578 HIST3H2BBQ8N257 126 aa5.99□□□□□ -1.45
LIMS2-210ENST00000413578 NOTCH2NLQ7Z3S9 236 aa5.97□□□□□ -1.45
LIMS2-210ENST00000413578 HIST1H2BLQ99880 126 aa5.97□□□□□ -1.45
LIMS2-210ENST00000413578 RBM12B-AS1Q9P1G2 102 aa5.96□□□□□ -1.46
LIMS2-210ENST00000413578 NDUFV3P56181 108 aaKnown RBP5.95□□□□□ -1.46
LIMS2-210ENST00000413578 C12orf57Q99622 126 aa5.94□□□□□ -1.46
LIMS2-210ENST00000413578 LINC00313P59037 77 aa5.93□□□□□ -1.46
LIMS2-210ENST00000413578 FAM218AQ96MZ4 157 aa5.93□□□□□ -1.46
LIMS2-210ENST00000413578 A0A1W2PNM2 257 aa5.92□□□□□ -1.46
LIMS2-210ENST00000413578 SIGMAR1Q99720 223 aa5.92□□□□□ -1.46
LIMS2-210ENST00000413578 LINC00846Q9NV44 126 aa5.92□□□□□ -1.46
LIMS2-210ENST00000413578 H3BMG7 143 aa5.9□□□□□ -1.46
LIMS2-210ENST00000413578 KRTAP6-3Q3LI67 103 aa5.9□□□□□ -1.46
LIMS2-210ENST00000413578 H0YGX0 51 aa5.89□□□□□ -1.47
LIMS2-210ENST00000413578 IGKV4-1P06312 121 aa5.88□□□□□ -1.47
LIMS2-210ENST00000413578 HIST1H4GQ99525 98 aa5.88□□□□□ -1.47
LIMS2-210ENST00000413578 HSBP1L1C9JCN9 74 aa5.87□□□□□ -1.47
LIMS2-210ENST00000413578 LINC00472Q9H8W2 130 aa5.87□□□□□ -1.47
LIMS2-210ENST00000413578 TRBV7-4A0A0J9YYF1 115 aa5.85□□□□□ -1.47
LIMS2-210ENST00000413578 A0A1B0GX51 115 aa5.85□□□□□ -1.47
LIMS2-210ENST00000413578 SNCGO76070 127 aa5.85□□□□□ -1.47
LIMS2-210ENST00000413578 NEBP20929 6669 aa5.84□□□□□ -1.47
LIMS2-210ENST00000413578 A0A0B4J2C4 111 aa5.83□□□□□ -1.48
LIMS2-210ENST00000413578 COX8AP10176 69 aa5.83□□□□□ -1.48
LIMS2-210ENST00000413578 FABP2P12104 132 aa5.83□□□□□ -1.48
LIMS2-210ENST00000413578 MTURNQ8N3F0 131 aa5.83□□□□□ -1.48
LIMS2-210ENST00000413578 IGHV6-1A0A0B4J1U7 121 aa5.82□□□□□ -1.48
LIMS2-210ENST00000413578 A8MWP4 228 aa5.82□□□□□ -1.48
LIMS2-210ENST00000413578 GHRHP01286 108 aa5.82□□□□□ -1.48
LIMS2-210ENST00000413578 DEFB116Q30KQ4 102 aa5.82□□□□□ -1.48
LIMS2-210ENST00000413578 RAB37Q96AX2 223 aa5.82□□□□□ -1.48
LIMS2-210ENST00000413578 MUC12Q9UKN1 5478 aa5.82□□□□□ -1.48
LIMS2-210ENST00000413578 DLEU1O43261 78 aa5.81□□□□□ -1.48
LIMS2-210ENST00000413578 SPINK7P58062 85 aa5.8□□□□□ -1.48
LIMS2-210ENST00000413578 PYY3Q5JQD4 70 aa5.8□□□□□ -1.48
LIMS2-210ENST00000413578 ZCCHC13Q8WW36 166 aaKnown RBP5.8□□□□□ -1.48
LIMS2-210ENST00000413578 PAM16Q9Y3D7 125 aa5.8□□□□□ -1.48
LIMS2-210ENST00000413578 ANKRD29Q8N6D5 301 aa5.79□□□□□ -1.48
LIMS2-210ENST00000413578 VAMP8Q9BV40 100 aa5.79□□□□□ -1.48
LIMS2-210ENST00000413578 C8orf87E5RJ46 101 aa5.78□□□□□ -1.48
LIMS2-210ENST00000413578 SPATA45Q537H7 98 aa5.78□□□□□ -1.48
LIMS2-210ENST00000413578 Q8N9P0 234 aaPredicted RBP5.78□□□□□ -1.48
LIMS2-210ENST00000413578 A0A1B0GVX0 72 aa5.77□□□□□ -1.49
LIMS2-210ENST00000413578 HIGD1BQ9P298 99 aa5.77□□□□□ -1.49
LIMS2-210ENST00000413578 C14orf144Q96I85 54 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms