RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 HSBP1O75506 76 aa1.13□□□□□ -2.23
RNU4-53P-201ENST00000410828 DPM2O94777 84 aa1.13□□□□□ -2.23
RNU4-53P-201ENST00000410828 GHRHP01286 108 aa1.13□□□□□ -2.23
RNU4-53P-201ENST00000410828 KRTAP5-9P26371 169 aa1.13□□□□□ -2.23
RNU4-53P-201ENST00000410828 OCIAD2Q56VL3 154 aa1.13□□□□□ -2.23
RNU4-53P-201ENST00000410828 NOTCH2NLQ7Z3S9 236 aa1.13□□□□□ -2.23
RNU4-53P-201ENST00000410828 SLC7A5P1Q8MH63 180 aa1.13□□□□□ -2.23
RNU4-53P-201ENST00000410828 SS18L2Q9UHA2 77 aa1.13□□□□□ -2.23
RNU4-53P-201ENST00000410828 TMEM218A2RU14 115 aa1.12□□□□□ -2.23
RNU4-53P-201ENST00000410828 A6NDN8 102 aa1.12□□□□□ -2.23
RNU4-53P-201ENST00000410828 E9PLD3 99 aa1.12□□□□□ -2.23
RNU4-53P-201ENST00000410828 SERF1AO75920 110 aa1.12□□□□□ -2.23
RNU4-53P-201ENST00000410828 LEPROTL1O95214 131 aa1.12□□□□□ -2.23
RNU4-53P-201ENST00000410828 SCGB1D1O95968 90 aa1.12□□□□□ -2.23
RNU4-53P-201ENST00000410828 IGKCP01834 107 aa1.12□□□□□ -2.23
RNU4-53P-201ENST00000410828 DSCR10P59022 87 aa1.12□□□□□ -2.23
RNU4-53P-201ENST00000410828 LINC00313P59037 77 aa1.12□□□□□ -2.23
RNU4-53P-201ENST00000410828 VAMP3Q15836 100 aa1.12□□□□□ -2.23
RNU4-53P-201ENST00000410828 ANKRD39Q53RE8 183 aa1.12□□□□□ -2.23
RNU4-53P-201ENST00000410828 UQCC3Q6UW78 93 aa1.12□□□□□ -2.23
RNU4-53P-201ENST00000410828 LITAFQ99732 161 aa1.12□□□□□ -2.23
RNU4-53P-201ENST00000410828 PMCHL2Q9BQD1 86 aa1.12□□□□□ -2.23
RNU4-53P-201ENST00000410828 SNHG12Q9BXW3 62 aa1.12□□□□□ -2.23
RNU4-53P-201ENST00000410828 GPR98Q8WXG9 6306 aa1.11□□□□□ -2.23
RNU4-53P-201ENST00000410828 hADV29S1A0JD25 119 aa1.11□□□□□ -2.23
RNU4-53P-201ENST00000410828 COLCA2A8K830 154 aa1.11□□□□□ -2.23
RNU4-53P-201ENST00000410828 Q6ZQY7 126 aa1.11□□□□□ -2.23
RNU4-53P-201ENST00000410828 PPDPFLQ8WWR9 84 aa1.11□□□□□ -2.23
RNU4-53P-201ENST00000410828 COPS9Q8WXC6 57 aa1.11□□□□□ -2.23
RNU4-53P-201ENST00000410828 HSPB8Q9UJY1 196 aa1.11□□□□□ -2.23
RNU4-53P-201ENST00000410828 A0A087WSZ3 146 aa1.1□□□□□ -2.23
RNU4-53P-201ENST00000410828 H3BUT2 72 aa1.1□□□□□ -2.23
RNU4-53P-201ENST00000410828 IFITM1P13164 125 aa1.1□□□□□ -2.23
RNU4-53P-201ENST00000410828 FABP4P15090 132 aa1.1□□□□□ -2.23
RNU4-53P-201ENST00000410828 SPINK7P58062 85 aa1.1□□□□□ -2.23
RNU4-53P-201ENST00000410828 CLLU1Q5K131 121 aa1.1□□□□□ -2.23
RNU4-53P-201ENST00000410828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.1□□□□□ -2.23
RNU4-53P-201ENST00000410828 LINC00575Q6W349 94 aa1.1□□□□□ -2.23
RNU4-53P-201ENST00000410828 TEN1Q86WV5 123 aa1.1□□□□□ -2.23
RNU4-53P-201ENST00000410828 SMIM11BQ8TCY0 68 aa1.1□□□□□ -2.23
RNU4-53P-201ENST00000410828 SIGMAR1Q99720 223 aa1.1□□□□□ -2.23
RNU4-53P-201ENST00000410828 KRTAP2-2Q9BYT5 123 aa1.1□□□□□ -2.23
RNU4-53P-201ENST00000410828 KRTAP2-1Q9BYU5 128 aa1.1□□□□□ -2.23
RNU4-53P-201ENST00000410828 A0A1W2PNM2 257 aa1.09□□□□□ -2.23
RNU4-53P-201ENST00000410828 IGKV4-1P06312 121 aa1.09□□□□□ -2.23
RNU4-53P-201ENST00000410828 C3orf79P0CE67 100 aa1.09□□□□□ -2.23
RNU4-53P-201ENST00000410828 SCGB1D4Q6XE38 83 aa1.09□□□□□ -2.23
RNU4-53P-201ENST00000410828 WFDC13Q8IUB5 93 aa1.09□□□□□ -2.23
RNU4-53P-201ENST00000410828 FAM218AQ96MZ4 157 aa1.09□□□□□ -2.23
RNU4-53P-201ENST00000410828 TTTY13Q9BZ97 58 aa1.09□□□□□ -2.23
RNU4-53P-201ENST00000410828 SYS1-DBNDD2H3BUS1 97 aa1.08□□□□□ -2.24
RNU4-53P-201ENST00000410828 MT1BP07438 61 aa1.08□□□□□ -2.24
RNU4-53P-201ENST00000410828 SPRR2EP22531 72 aa1.08□□□□□ -2.24
RNU4-53P-201ENST00000410828 SPRR2BP35325 72 aa1.08□□□□□ -2.24
RNU4-53P-201ENST00000410828 SPRR2AP35326 72 aa1.08□□□□□ -2.24
RNU4-53P-201ENST00000410828 KRTAP10-5P60370 271 aa1.08□□□□□ -2.24
RNU4-53P-201ENST00000410828 H1FX-AS1Q4G0G2 97 aa1.08□□□□□ -2.24
RNU4-53P-201ENST00000410828 Q5VV11 94 aa1.08□□□□□ -2.24
RNU4-53P-201ENST00000410828 MUSTN1Q8IVN3 82 aa1.08□□□□□ -2.24
RNU4-53P-201ENST00000410828 ZCCHC13Q8WW36 166 aaKnown RBP1.08□□□□□ -2.24
RNU4-53P-201ENST00000410828 C12orf57Q99622 126 aa1.08□□□□□ -2.24
RNU4-53P-201ENST00000410828 DSTQ03001 7570 aaKnown RBP1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 IGHV6-1A0A0B4J1U7 121 aa1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 FAM236AA0A1B0GUQ0 79 aa1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 FAM236BA0A1B0GV22 79 aa1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 C8orf87E5RJ46 101 aa1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 H3BMG7 143 aa1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 SNCGO76070 127 aa1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 SNAPINO95295 136 aa1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 APOC3P02656 99 aa1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 TRGC2P03986 189 aa1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 NDUFV3P56181 108 aaKnown RBP1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 LINC00310P59036 64 aa1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 NDUFA5Q16718 116 aa1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 BVES-AS1Q5T3Y7 98 aa1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 LYRM7Q5U5X0 104 aa1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 PET117Q6UWS5 81 aa1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 SPRR2FQ96RM1 72 aa1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 DSCR8Q96T75 97 aa1.07□□□□□ -2.24
RNU4-53P-201ENST00000410828 DEFB116Q30KQ4 102 aa1.06□□□□□ -2.24
RNU4-53P-201ENST00000410828 KRTAP19-8Q3LI54 63 aa1.06□□□□□ -2.24
RNU4-53P-201ENST00000410828 LINC01545Q5VT33 79 aa1.06□□□□□ -2.24
RNU4-53P-201ENST00000410828 SVBPQ8N300 66 aa1.06□□□□□ -2.24
RNU4-53P-201ENST00000410828 RAB37Q96AX2 223 aa1.06□□□□□ -2.24
RNU4-53P-201ENST00000410828 YPEL4Q96NS1 127 aa1.06□□□□□ -2.24
RNU4-53P-201ENST00000410828 SPRR2GQ9BYE4 73 aa1.06□□□□□ -2.24
RNU4-53P-201ENST00000410828 IMUPQ9GZP8 106 aa1.06□□□□□ -2.24
RNU4-53P-201ENST00000410828 LINC00472Q9H8W2 130 aa1.06□□□□□ -2.24
RNU4-53P-201ENST00000410828 IGKV3D-7A0A0C4DH55 119 aa1.05□□□□□ -2.24
RNU4-53P-201ENST00000410828 TRBV7-4A0A0J9YYF1 115 aa1.05□□□□□ -2.24
RNU4-53P-201ENST00000410828 A0A1B0GVX0 72 aa1.05□□□□□ -2.24
RNU4-53P-201ENST00000410828 H0YGX0 51 aa1.05□□□□□ -2.24
RNU4-53P-201ENST00000410828 FABP2P12104 132 aa1.05□□□□□ -2.24
RNU4-53P-201ENST00000410828 SPRR2DP22532 72 aa1.05□□□□□ -2.24
RNU4-53P-201ENST00000410828 LCE1AQ5T7P2 110 aa1.05□□□□□ -2.24
RNU4-53P-201ENST00000410828 ANKRD29Q8N6D5 301 aa1.05□□□□□ -2.24
RNU4-53P-201ENST00000410828 J3KT08 172 aa1.04□□□□□ -2.24
RNU4-53P-201ENST00000410828 NDUFB1O75438 58 aa1.04□□□□□ -2.24
RNU4-53P-201ENST00000410828 TRACP01848 142 aa1.04□□□□□ -2.24
RNU4-53P-201ENST00000410828 CCKP06307 115 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 247.2 ms