RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 NOTCH1P46531 2555 aa10.4□□□□□ -0.75
LIMS2-208ENST00000410011 A0A0G2JQZ4 141 aa10.39□□□□□ -0.75
LIMS2-208ENST00000410011 LINC00336Q6ZUF6 198 aa10.39□□□□□ -0.75
LIMS2-208ENST00000410011 FAM229BQ4G0N7 80 aa10.38□□□□□ -0.75
LIMS2-208ENST00000410011 C9orf163Q8N9P6 203 aa10.37□□□□□ -0.75
LIMS2-208ENST00000410011 PRO0628Q9UI54 55 aa10.37□□□□□ -0.75
LIMS2-208ENST00000410011 hDV103S1A0JD37 113 aa10.36□□□□□ -0.75
LIMS2-208ENST00000410011 KRTAP29-1A8MX34 341 aaPredicted RBP10.36□□□□□ -0.75
LIMS2-208ENST00000410011 NDUFB1O75438 58 aa10.36□□□□□ -0.75
LIMS2-208ENST00000410011 PHF5AQ7RTV0 110 aaKnown RBP10.36□□□□□ -0.75
LIMS2-208ENST00000410011 KRTAP11-1Q8IUC1 163 aa10.36□□□□□ -0.75
LIMS2-208ENST00000410011 UBE2DNLQ8IWF7 75 aa10.35□□□□□ -0.75
LIMS2-208ENST00000410011 CYP4F30PQ9H0H9 118 aa10.35□□□□□ -0.75
LIMS2-208ENST00000410011 BAHCC1Q9P281 2608 aa10.34□□□□□ -0.75
LIMS2-208ENST00000410011 DEFB116Q30KQ4 102 aa10.33□□□□□ -0.76
LIMS2-208ENST00000410011 PRR15Q8IV56 129 aa10.33□□□□□ -0.76
LIMS2-208ENST00000410011 LINC00472Q9H8W2 130 aa10.33□□□□□ -0.76
LIMS2-208ENST00000410011 CHTF8P0CG12 524 aa10.32□□□□□ -0.76
LIMS2-208ENST00000410011 DNAH10Q8IVF4 4471 aa10.32□□□□□ -0.76
LIMS2-208ENST00000410011 LRCOL1A6NCL2 159 aa10.32□□□□□ -0.76
LIMS2-208ENST00000410011 MP68P56378 58 aa10.32□□□□□ -0.76
LIMS2-208ENST00000410011 H3BPC8 53 aa10.31□□□□□ -0.76
LIMS2-208ENST00000410011 NBEAL1Q6ZS30 2694 aa10.31□□□□□ -0.76
LIMS2-208ENST00000410011 A8MWP4 228 aa10.3□□□□□ -0.76
LIMS2-208ENST00000410011 WFDC13Q8IUB5 93 aa10.3□□□□□ -0.76
LIMS2-208ENST00000410011 B9D2Q9BPU9 175 aa10.3□□□□□ -0.76
LIMS2-208ENST00000410011 DNAH9Q9NYC9 4486 aa10.3□□□□□ -0.76
LIMS2-208ENST00000410011 C1orf64Q8NEQ6 169 aa10.3□□□□□ -0.76
LIMS2-208ENST00000410011 KRTAP13-1Q8IUC0 172 aa10.29□□□□□ -0.76
LIMS2-208ENST00000410011 RPL37AP61513 92 aaKnown RBP10.28□□□□□ -0.76
LIMS2-208ENST00000410011 CASC2Q6XLA1 102 aa10.27□□□□□ -0.77
LIMS2-208ENST00000410011 MPLKIPQ8TAP9 179 aa10.27□□□□□ -0.77
LIMS2-208ENST00000410011 TRAV22A0A0B4J277 110 aa10.27□□□□□ -0.77
LIMS2-208ENST00000410011 DYNC2H1Q8NCM8 4307 aaKnown RBP10.26□□□□□ -0.77
LIMS2-208ENST00000410011 Q1T7F1 81 aa10.25□□□□□ -0.77
LIMS2-208ENST00000410011 NBDYA0A0U1RRE5 68 aa10.25□□□□□ -0.77
LIMS2-208ENST00000410011 COL6A5A8TX70 2615 aa10.24□□□□□ -0.77
LIMS2-208ENST00000410011 Q6ZRN7 208 aaPredicted RBP10.24□□□□□ -0.77
LIMS2-208ENST00000410011 SPANXA2-OT1Q8N9U9 137 aa10.23□□□□□ -0.77
LIMS2-208ENST00000410011 LINC00208Q96KT6 92 aa10.22□□□□□ -0.77
LIMS2-208ENST00000410011 H0Y9P7 68 aa10.19□□□□□ -0.78
LIMS2-208ENST00000410011 LYSTQ99698 3801 aa10.19□□□□□ -0.78
LIMS2-208ENST00000410011 PANO1I0J062 215 aa10.18□□□□□ -0.78
LIMS2-208ENST00000410011 STAB2Q8WWQ8 2551 aa10.18□□□□□ -0.78
LIMS2-208ENST00000410011 NUPR2A6NF83 97 aa10.18□□□□□ -0.78
LIMS2-208ENST00000410011 SPACA4Q8TDM5 124 aa10.18□□□□□ -0.78
LIMS2-208ENST00000410011 LINC00483Q53H64 154 aa10.17□□□□□ -0.78
LIMS2-208ENST00000410011 MMP24-AS1A0A0U1RRL7 71 aa10.17□□□□□ -0.78
LIMS2-208ENST00000410011 ASB16-AS1Q495Z4 193 aa10.16□□□□□ -0.78
LIMS2-208ENST00000410011 BRK1Q8WUW1 75 aa10.16□□□□□ -0.78
LIMS2-208ENST00000410011 MDFIQ99750 246 aa10.16□□□□□ -0.78
LIMS2-208ENST00000410011 MGAM2Q2M2H8 2515 aa10.14□□□□□ -0.79
LIMS2-208ENST00000410011 Q96NJ1 140 aa10.13□□□□□ -0.79
LIMS2-208ENST00000410011 V9GYY9 64 aa10.12□□□□□ -0.79
LIMS2-208ENST00000410011 COL7A1Q02388 2944 aa10.12□□□□□ -0.79
LIMS2-208ENST00000410011 PRR4Q16378 134 aa10.12□□□□□ -0.79
LIMS2-208ENST00000410011 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.12□□□□□ -0.79
LIMS2-208ENST00000410011 TP53AIP1Q9HCN2 124 aa10.11□□□□□ -0.79
LIMS2-208ENST00000410011 ZNF706Q9Y5V0 76 aaPredicted RBP10.11□□□□□ -0.79
LIMS2-208ENST00000410011 MOBPQ13875 183 aa10.1□□□□□ -0.79
LIMS2-208ENST00000410011 SRRM2Q9UQ35 2752 aaKnown RBP10.08□□□□□ -0.8
LIMS2-208ENST00000410011 PLECQ15149 4684 aaKnown RBP10.08□□□□□ -0.8
LIMS2-208ENST00000410011 A0A087WTM6 91 aa10.07□□□□□ -0.8
LIMS2-208ENST00000410011 IGLV9-49A0A0B4J1Y8 123 aa10.06□□□□□ -0.8
LIMS2-208ENST00000410011 DNAH7Q8WXX0 4024 aa10.06□□□□□ -0.8
LIMS2-208ENST00000410011 WWC2-AS2Q96NR7 200 aa10.05□□□□□ -0.8
LIMS2-208ENST00000410011 IGLV7-46A0A075B6I9 117 aa10.05□□□□□ -0.8
LIMS2-208ENST00000410011 C8orf17Q9NRJ1 99 aa10.04□□□□□ -0.8
LIMS2-208ENST00000410011 CSMD3Q7Z407 3707 aa10.04□□□□□ -0.8
LIMS2-208ENST00000410011 IGLV5-52A0A0A0MRZ9 124 aa10.04□□□□□ -0.8
LIMS2-208ENST00000410011 Q6ZR54 194 aa10.04□□□□□ -0.8
LIMS2-208ENST00000410011 C1orf195Q5TG92 126 aa10.02□□□□□ -0.8
LIMS2-208ENST00000410011 PLAC8Q9NZF1 115 aa10.02□□□□□ -0.8
LIMS2-208ENST00000410011 A0A1B0GVX0 72 aa10.01□□□□□ -0.81
LIMS2-208ENST00000410011 ZNF861PO60384 105 aa10.01□□□□□ -0.81
LIMS2-208ENST00000410011 PSORS1C2Q9UIG4 136 aa10.01□□□□□ -0.81
LIMS2-208ENST00000410011 VPS13DQ5THJ4 4388 aa10□□□□□ -0.81
LIMS2-208ENST00000410011 RTL8CO15255 209 aa9.99□□□□□ -0.81
LIMS2-208ENST00000410011 LIMD2Q9BT23 127 aa9.99□□□□□ -0.81
LIMS2-208ENST00000410011 PSPHP1O15172 72 aa9.99□□□□□ -0.81
LIMS2-208ENST00000410011 Q8N9P0 234 aaPredicted RBP9.98□□□□□ -0.81
LIMS2-208ENST00000410011 TENM2Q9NT68 2774 aa9.96□□□□□ -0.82
LIMS2-208ENST00000410011 CDK2AP2O75956 126 aa9.95□□□□□ -0.82
LIMS2-208ENST00000410011 MRPL34Q9BQ48 92 aaKnown RBP9.95□□□□□ -0.82
LIMS2-208ENST00000410011 A8MUN3 132 aa9.94□□□□□ -0.82
LIMS2-208ENST00000410011 IGHV6-1A0A0B4J1U7 121 aa9.93□□□□□ -0.82
LIMS2-208ENST00000410011 Q5VV11 94 aa9.93□□□□□ -0.82
LIMS2-208ENST00000410011 COA5Q86WW8 74 aa9.93□□□□□ -0.82
LIMS2-208ENST00000410011 CD164Q04900 197 aa9.91□□□□□ -0.82
LIMS2-208ENST00000410011 DNAH8Q96JB1 4490 aa9.89□□□□□ -0.83
LIMS2-208ENST00000410011 DNAH17Q9UFH2 4485 aa9.89□□□□□ -0.83
LIMS2-208ENST00000410011 STARD9Q9P2P6 4700 aa9.88□□□□□ -0.83
LIMS2-208ENST00000410011 LOC101927531A0A1B0GV80 90 aa9.87□□□□□ -0.83
LIMS2-208ENST00000410011 PCOTHQ58A44 107 aa9.87□□□□□ -0.83
LIMS2-208ENST00000410011 ANAPC11Q9NYG5 84 aa9.87□□□□□ -0.83
LIMS2-208ENST00000410011 NDUFS5O43920 106 aa9.87□□□□□ -0.83
LIMS2-208ENST00000410011 HECTD4Q9Y4D8 3996 aa9.86□□□□□ -0.83
LIMS2-208ENST00000410011 IGLV7-43P04211 117 aa9.86□□□□□ -0.83
LIMS2-208ENST00000410011 PRKDCP78527 4128 aaKnown RBP9.86□□□□□ -0.83
LIMS2-208ENST00000410011 A0A087X002 238 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms