RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 SNCGO76070 127 aa8.39□□□□□ -1.07
CHRNA1-204ENST00000409323 OCIAD2Q56VL3 154 aa8.39□□□□□ -1.07
CHRNA1-204ENST00000409323 DNAL4O96015 105 aa8.39□□□□□ -1.07
CHRNA1-204ENST00000409323 C21orf62-AS1Q17RA5 79 aa8.39□□□□□ -1.07
CHRNA1-204ENST00000409323 ZNF706Q9Y5V0 76 aaPredicted RBP8.39□□□□□ -1.07
CHRNA1-204ENST00000409323 C3orf22Q8N5N4 141 aa8.38□□□□□ -1.07
CHRNA1-204ENST00000409323 LRP1Q07954 4544 aaKnown RBP8.38□□□□□ -1.07
CHRNA1-204ENST00000409323 H3BQ85 93 aa8.37□□□□□ -1.07
CHRNA1-204ENST00000409323 LINC01547P58512 204 aaPredicted RBP8.37□□□□□ -1.07
CHRNA1-204ENST00000409323 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.36□□□□□ -1.07
CHRNA1-204ENST00000409323 PPDPFLQ8WWR9 84 aa8.36□□□□□ -1.07
CHRNA1-204ENST00000409323 OBSCN-AS1Q96MR7 158 aa8.36□□□□□ -1.07
CHRNA1-204ENST00000409323 ORMDL1Q9P0S3 153 aa8.36□□□□□ -1.07
CHRNA1-204ENST00000409323 MYCBP2O75592 4640 aa8.36□□□□□ -1.07
CHRNA1-204ENST00000409323 IGLV9-49A0A0B4J1Y8 123 aa8.35□□□□□ -1.07
CHRNA1-204ENST00000409323 TMEM256-PLSCR3K7ERE1 68 aa8.35□□□□□ -1.07
CHRNA1-204ENST00000409323 KRTAP13-2Q52LG2 175 aa8.35□□□□□ -1.07
CHRNA1-204ENST00000409323 LINC00483Q53H64 154 aa8.35□□□□□ -1.07
CHRNA1-204ENST00000409323 Q8N377 158 aa8.35□□□□□ -1.07
CHRNA1-204ENST00000409323 K7ERU9 68 aa8.34□□□□□ -1.07
CHRNA1-204ENST00000409323 TEX49A0A1B0GTD5 131 aa8.33□□□□□ -1.08
CHRNA1-204ENST00000409323 CRYGAP11844 174 aa8.33□□□□□ -1.08
CHRNA1-204ENST00000409323 IGLV5-48A0A075B6I7 105 aa8.32□□□□□ -1.08
CHRNA1-204ENST00000409323 GHRHP01286 108 aa8.32□□□□□ -1.08
CHRNA1-204ENST00000409323 MT1HL1P0DM35 61 aa8.31□□□□□ -1.08
CHRNA1-204ENST00000409323 MOBPQ13875 183 aa8.31□□□□□ -1.08
CHRNA1-204ENST00000409323 PCLOQ9Y6V0 5065 aa8.31□□□□□ -1.08
CHRNA1-204ENST00000409323 C9orf153Q5TBE3 101 aa8.31□□□□□ -1.08
CHRNA1-204ENST00000409323 SMIM29Q86T20 159 aa8.31□□□□□ -1.08
CHRNA1-204ENST00000409323 A0A1B0GV72 72 aa8.3□□□□□ -1.08
CHRNA1-204ENST00000409323 J3QR89 54 aa8.3□□□□□ -1.08
CHRNA1-204ENST00000409323 SPRR1BP22528 89 aa8.3□□□□□ -1.08
CHRNA1-204ENST00000409323 FAM229BQ4G0N7 80 aa8.3□□□□□ -1.08
CHRNA1-204ENST00000409323 TYMSOSQ8TAI1 123 aa8.3□□□□□ -1.08
CHRNA1-204ENST00000409323 FAT3Q8TDW7 4589 aa8.29□□□□□ -1.08
CHRNA1-204ENST00000409323 A0A0G2JQZ4 141 aa8.29□□□□□ -1.08
CHRNA1-204ENST00000409323 KRTAP29-1A8MX34 341 aaPredicted RBP8.29□□□□□ -1.08
CHRNA1-204ENST00000409323 OXTP01178 125 aa8.29□□□□□ -1.08
CHRNA1-204ENST00000409323 J3QL48 77 aa8.28□□□□□ -1.08
CHRNA1-204ENST00000409323 KRTAP10-8P60410 259 aa8.28□□□□□ -1.08
CHRNA1-204ENST00000409323 LAMTOR3Q9UHA4 124 aa8.28□□□□□ -1.08
CHRNA1-204ENST00000409323 JMJD7-PLA2G4BH0Y9G9 81 aa8.27□□□□□ -1.09
CHRNA1-204ENST00000409323 Q8NBF4 154 aa8.25□□□□□ -1.09
CHRNA1-204ENST00000409323 FAM240AA0A1B0GVK7 77 aa8.23□□□□□ -1.09
CHRNA1-204ENST00000409323 F8WEM9 126 aa8.22□□□□□ -1.09
CHRNA1-204ENST00000409323 NDUFV3P56181 108 aaKnown RBP8.22□□□□□ -1.09
CHRNA1-204ENST00000409323 HRCT1Q6UXD1 115 aa8.22□□□□□ -1.09
CHRNA1-204ENST00000409323 DMBT1Q9UGM3 2413 aaPredicted RBP8.21□□□□□ -1.1
CHRNA1-204ENST00000409323 TNXBP22105 4242 aa8.21□□□□□ -1.1
CHRNA1-204ENST00000409323 LOC110117498A0A087WWA1 95 aa8.19□□□□□ -1.1
CHRNA1-204ENST00000409323 ACYP1P07311 99 aa8.19□□□□□ -1.1
CHRNA1-204ENST00000409323 RBM3P98179 157 aaKnown RBP8.19□□□□□ -1.1
CHRNA1-204ENST00000409323 LINC00304Q8N9R0 145 aa8.19□□□□□ -1.1
CHRNA1-204ENST00000409323 PDE6GP18545 87 aa8.18□□□□□ -1.1
CHRNA1-204ENST00000409323 C14orf132Q9NPU4 83 aa8.18□□□□□ -1.1
CHRNA1-204ENST00000409323 TRBV7-4A0A0J9YYF1 115 aa8.17□□□□□ -1.1
CHRNA1-204ENST00000409323 CCKP06307 115 aa8.17□□□□□ -1.1
CHRNA1-204ENST00000409323 IGFL1Q6UW32 110 aa8.17□□□□□ -1.1
CHRNA1-204ENST00000409323 SSBP3-AS1Q7Z2R9 100 aa8.17□□□□□ -1.1
CHRNA1-204ENST00000409323 CDIP1Q9H305 208 aa8.17□□□□□ -1.1
CHRNA1-204ENST00000409323 Q6ZQT0 140 aa8.15□□□□□ -1.1
CHRNA1-204ENST00000409323 IGLV8-61A0A075B6I0 122 aa8.14□□□□□ -1.11
CHRNA1-204ENST00000409323 C4orf48Q5BLP8 95 aa8.14□□□□□ -1.11
CHRNA1-204ENST00000409323 DSCR8Q96T75 97 aa8.13□□□□□ -1.11
CHRNA1-204ENST00000409323 Q6JHZ5 121 aa8.1□□□□□ -1.11
CHRNA1-204ENST00000409323 RETNLBQ9BQ08 111 aa8.1□□□□□ -1.11
CHRNA1-204ENST00000409323 VPS25Q9BRG1 176 aa8.1□□□□□ -1.11
CHRNA1-204ENST00000409323 A0A1B0GW54 56 aa8.09□□□□□ -1.11
CHRNA1-204ENST00000409323 A0A1W2PNM2 257 aa8.07□□□□□ -1.12
CHRNA1-204ENST00000409323 SPAG11AQ6PDA7 123 aa8.07□□□□□ -1.12
CHRNA1-204ENST00000409323 SPINK1P00995 79 aa8.06□□□□□ -1.12
CHRNA1-204ENST00000409323 LINC00846Q9NV44 126 aa8.06□□□□□ -1.12
CHRNA1-204ENST00000409323 SIGMAR1Q99720 223 aa8.05□□□□□ -1.12
CHRNA1-204ENST00000409323 TRBV7-7A0A0K0K1E9 115 aa8.04□□□□□ -1.12
CHRNA1-204ENST00000409323 CD164Q04900 197 aa8.03□□□□□ -1.12
CHRNA1-204ENST00000409323 LINC00643Q86TS7 51 aa8.03□□□□□ -1.12
CHRNA1-204ENST00000409323 A0A087WSZ3 146 aa8.02□□□□□ -1.13
CHRNA1-204ENST00000409323 Q6Q795 121 aa8□□□□□ -1.13
CHRNA1-204ENST00000409323 MT-ATP8P03928 68 aa7.99□□□□□ -1.13
CHRNA1-204ENST00000409323 PRR4Q16378 134 aa7.99□□□□□ -1.13
CHRNA1-204ENST00000409323 LIMD2Q9BT23 127 aa7.99□□□□□ -1.13
CHRNA1-204ENST00000409323 HERC1Q15751 4861 aa7.99□□□□□ -1.13
CHRNA1-204ENST00000409323 RPS29P62273 56 aaKnown RBP7.97□□□□□ -1.13
CHRNA1-204ENST00000409323 IMUPQ9GZP8 106 aa7.97□□□□□ -1.13
CHRNA1-204ENST00000409323 UBL5Q9BZL1 73 aa7.97□□□□□ -1.13
CHRNA1-204ENST00000409323 C1orf195Q5TG92 126 aa7.94□□□□□ -1.14
CHRNA1-204ENST00000409323 Q6ZVQ6 151 aa7.94□□□□□ -1.14
CHRNA1-204ENST00000409323 SCGB1A1P11684 91 aa7.93□□□□□ -1.14
CHRNA1-204ENST00000409323 DEFB116Q30KQ4 102 aa7.93□□□□□ -1.14
CHRNA1-204ENST00000409323 ATP5EP2Q5VTU8 51 aa7.93□□□□□ -1.14
CHRNA1-204ENST00000409323 Q5XG85 94 aa7.93□□□□□ -1.14
CHRNA1-204ENST00000409323 IGLV7-46A0A075B6I9 117 aa7.9□□□□□ -1.14
CHRNA1-204ENST00000409323 CXCL6P80162 114 aa7.9□□□□□ -1.14
CHRNA1-204ENST00000409323 SS18L2Q9UHA2 77 aa7.9□□□□□ -1.14
CHRNA1-204ENST00000409323 Q96NJ1 140 aa7.89□□□□□ -1.15
CHRNA1-204ENST00000409323 NREPQ16612 68 aa7.88□□□□□ -1.15
CHRNA1-204ENST00000409323 ASB16-AS1Q495Z4 193 aa7.87□□□□□ -1.15
CHRNA1-204ENST00000409323 IGKV3D-7A0A0C4DH55 119 aa7.84□□□□□ -1.15
CHRNA1-204ENST00000409323 FP248Q71RG6 208 aaPredicted RBP7.84□□□□□ -1.15
CHRNA1-204ENST00000409323 IGKV4-1P06312 121 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms