RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 E9PLD3 99 aa4.09□□□□□ -1.75
LSM5-202ENST00000409292 TIMM17BO60830 172 aa4.09□□□□□ -1.75
LSM5-202ENST00000409292 FABP4P15090 132 aa4.09□□□□□ -1.75
LSM5-202ENST00000409292 SOSTDC1Q6X4U4 206 aa4.09□□□□□ -1.75
LSM5-202ENST00000409292 PCP2Q8IVA1 136 aa4.09□□□□□ -1.75
LSM5-202ENST00000409292 C20orf202A1L168 122 aa4.08□□□□□ -1.76
LSM5-202ENST00000409292 ADAMTSL4-AS1Q5T5F5 129 aa4.08□□□□□ -1.76
LSM5-202ENST00000409292 PMCHL2Q9BQD1 86 aa4.08□□□□□ -1.76
LSM5-202ENST00000409292 A6NDN8 102 aa4.06□□□□□ -1.76
LSM5-202ENST00000409292 ZNF815PA8K554 130 aa4.06□□□□□ -1.76
LSM5-202ENST00000409292 SERF1AO75920 110 aa4.06□□□□□ -1.76
LSM5-202ENST00000409292 IGLV5-48A0A075B6I7 105 aa4.05□□□□□ -1.76
LSM5-202ENST00000409292 VAMP3Q15836 100 aa4.05□□□□□ -1.76
LSM5-202ENST00000409292 Q6JHZ5 121 aa4.05□□□□□ -1.76
LSM5-202ENST00000409292 SCGB1D4Q6XE38 83 aa4.05□□□□□ -1.76
LSM5-202ENST00000409292 Q75L30 129 aa4.04□□□□□ -1.76
LSM5-202ENST00000409292 LINC00846Q9NV44 126 aa4.04□□□□□ -1.76
LSM5-202ENST00000409292 TRAV13-2A0A0B4J235 113 aa4.03□□□□□ -1.76
LSM5-202ENST00000409292 TRGC2P03986 189 aa4.03□□□□□ -1.76
LSM5-202ENST00000409292 IFITM1P13164 125 aa4.03□□□□□ -1.76
LSM5-202ENST00000409292 SLC7A5P1Q8MH63 180 aa4.03□□□□□ -1.76
LSM5-202ENST00000409292 OBSCN-AS1Q96MR7 158 aa4.03□□□□□ -1.76
LSM5-202ENST00000409292 Q6ZVH6 145 aa4.02□□□□□ -1.77
LSM5-202ENST00000409292 LITAFQ99732 161 aa4.02□□□□□ -1.77
LSM5-202ENST00000409292 IGKV2D-30A0A075B6S6 120 aa4.01□□□□□ -1.77
LSM5-202ENST00000409292 FAM236DA0A1B0GTK5 79 aa4.01□□□□□ -1.77
LSM5-202ENST00000409292 LST1O00453 97 aa4.01□□□□□ -1.77
LSM5-202ENST00000409292 FAM236CP0DP71 79 aa4.01□□□□□ -1.77
LSM5-202ENST00000409292 CLEC2BQ92478 149 aa4.01□□□□□ -1.77
LSM5-202ENST00000409292 Q96NJ1 140 aa4.01□□□□□ -1.77
LSM5-202ENST00000409292 SS18L2Q9UHA2 77 aa4.01□□□□□ -1.77
LSM5-202ENST00000409292 A0A0G2JQZ4 141 aa4□□□□□ -1.77
LSM5-202ENST00000409292 TRBV7-7A0A0K0K1E9 115 aa4□□□□□ -1.77
LSM5-202ENST00000409292 SYS1-DBNDD2H3BUS1 97 aa4□□□□□ -1.77
LSM5-202ENST00000409292 SCGB1D1O95968 90 aa4□□□□□ -1.77
LSM5-202ENST00000409292 YPEL4Q96NS1 127 aa4□□□□□ -1.77
LSM5-202ENST00000409292 PET117Q6UWS5 81 aa3.99□□□□□ -1.77
LSM5-202ENST00000409292 SNCGO76070 127 aa3.98□□□□□ -1.77
LSM5-202ENST00000409292 OCIAD2Q56VL3 154 aa3.98□□□□□ -1.77
LSM5-202ENST00000409292 SNHG12Q9BXW3 62 aa3.98□□□□□ -1.77
LSM5-202ENST00000409292 hADV29S1A0JD25 119 aa3.97□□□□□ -1.77
LSM5-202ENST00000409292 LINC01545Q5VT33 79 aa3.97□□□□□ -1.77
LSM5-202ENST00000409292 IGFL1Q6UW32 110 aa3.97□□□□□ -1.77
LSM5-202ENST00000409292 MPLKIPQ8TAP9 179 aa3.97□□□□□ -1.77
LSM5-202ENST00000409292 PPDPFLQ8WWR9 84 aa3.97□□□□□ -1.77
LSM5-202ENST00000409292 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
LSM5-202ENST00000409292 RBM12B-AS1Q9P1G2 102 aa3.97□□□□□ -1.77
LSM5-202ENST00000409292 Q6ZQY7 126 aa3.96□□□□□ -1.78
LSM5-202ENST00000409292 MUSTN1Q8IVN3 82 aa3.96□□□□□ -1.78
LSM5-202ENST00000409292 SMIM11BQ8TCY0 68 aa3.96□□□□□ -1.78
LSM5-202ENST00000409292 FLGP20930 4061 aaPredicted RBP3.95□□□□□ -1.78
LSM5-202ENST00000409292 KRTAP10-7P60409 375 aaPredicted RBP3.94□□□□□ -1.78
LSM5-202ENST00000409292 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.94□□□□□ -1.78
LSM5-202ENST00000409292 LINC00575Q6W349 94 aa3.94□□□□□ -1.78
LSM5-202ENST00000409292 MTURNQ8N3F0 131 aa3.94□□□□□ -1.78
LSM5-202ENST00000409292 C20orf166-AS1Q96NR2 134 aa3.94□□□□□ -1.78
LSM5-202ENST00000409292 C12orf57Q99622 126 aa3.94□□□□□ -1.78
LSM5-202ENST00000409292 TTTY13Q9BZ97 58 aa3.94□□□□□ -1.78
LSM5-202ENST00000409292 KRTAP10-10P60014 251 aa3.93□□□□□ -1.78
LSM5-202ENST00000409292 KRTDAPP60985 99 aa3.93□□□□□ -1.78
LSM5-202ENST00000409292 A8MUU9 505 aa3.92□□□□□ -1.78
LSM5-202ENST00000409292 BVES-AS1Q5T3Y7 98 aa3.92□□□□□ -1.78
LSM5-202ENST00000409292 SNRPEP62304 92 aaKnown RBP3.91□□□□□ -1.78
LSM5-202ENST00000409292 TEN1Q86WV5 123 aa3.91□□□□□ -1.78
LSM5-202ENST00000409292 C3orf79P0CE67 100 aa3.9□□□□□ -1.79
LSM5-202ENST00000409292 SIGMAR1Q99720 223 aa3.9□□□□□ -1.79
LSM5-202ENST00000409292 COLCA2A8K830 154 aa3.89□□□□□ -1.79
LSM5-202ENST00000409292 HSBP1L1C9JCN9 74 aa3.89□□□□□ -1.79
LSM5-202ENST00000409292 H3BUT2 72 aa3.89□□□□□ -1.79
LSM5-202ENST00000409292 MT2AP02795 61 aa3.89□□□□□ -1.79
LSM5-202ENST00000409292 SSPOA2VEC9 5147 aa3.88□□□□□ -1.79
LSM5-202ENST00000409292 HIST1H2BKO60814 126 aa3.88□□□□□ -1.79
LSM5-202ENST00000409292 HIST1H2BJP06899 126 aa3.88□□□□□ -1.79
LSM5-202ENST00000409292 HIST1H2BOP23527 126 aa3.88□□□□□ -1.79
LSM5-202ENST00000409292 HIST1H2BBP33778 126 aa3.88□□□□□ -1.79
LSM5-202ENST00000409292 HIST1H2BDP58876 126 aa3.88□□□□□ -1.79
LSM5-202ENST00000409292 LINC00313P59037 77 aa3.88□□□□□ -1.79
LSM5-202ENST00000409292 HIST1H2BCP62807 126 aa3.88□□□□□ -1.79
LSM5-202ENST00000409292 HIST2H2BEQ16778 126 aa3.88□□□□□ -1.79
LSM5-202ENST00000409292 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.88□□□□□ -1.79
LSM5-202ENST00000409292 HIST1H2BHQ93079 126 aa3.88□□□□□ -1.79
LSM5-202ENST00000409292 HIST1H2BNQ99877 126 aa3.88□□□□□ -1.79
LSM5-202ENST00000409292 HIST1H2BMQ99879 126 aa3.88□□□□□ -1.79
LSM5-202ENST00000409292 USH2AO75445 5202 aa3.87□□□□□ -1.79
LSM5-202ENST00000409292 A0A087WSZ3 146 aa3.87□□□□□ -1.79
LSM5-202ENST00000409292 DSCR10P59022 87 aa3.87□□□□□ -1.79
LSM5-202ENST00000409292 ATOH7Q8N100 152 aa3.86□□□□□ -1.79
LSM5-202ENST00000409292 H0YGX0 51 aa3.85□□□□□ -1.79
LSM5-202ENST00000409292 MT1FP04733 61 aa3.85□□□□□ -1.79
LSM5-202ENST00000409292 NDUFV3P56181 108 aaKnown RBP3.85□□□□□ -1.79
LSM5-202ENST00000409292 FCGBPQ9Y6R7 5405 aaPredicted RBP3.85□□□□□ -1.79
LSM5-202ENST00000409292 H3BMG7 143 aa3.84□□□□□ -1.79
LSM5-202ENST00000409292 IGKV4-1P06312 121 aa3.84□□□□□ -1.79
LSM5-202ENST00000409292 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
LSM5-202ENST00000409292 FABP2P12104 132 aa3.83□□□□□ -1.8
LSM5-202ENST00000409292 RAB37Q96AX2 223 aa3.83□□□□□ -1.8
LSM5-202ENST00000409292 HIST1H4GQ99525 98 aa3.83□□□□□ -1.8
LSM5-202ENST00000409292 SYNE2Q8WXH0 6885 aaKnown RBP3.82□□□□□ -1.8
LSM5-202ENST00000409292 A8MWP4 228 aa3.82□□□□□ -1.8
LSM5-202ENST00000409292 MT3P25713 68 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms