RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 STAB2Q8WWQ8 2551 aa6.21□□□□□ -1.41
MSH2-202ENST00000406134 A0A0G2JQZ4 141 aa6.2□□□□□ -1.42
MSH2-202ENST00000406134 A0A1W2PNN7 141 aa6.2□□□□□ -1.42
MSH2-202ENST00000406134 NREPQ16612 68 aa6.2□□□□□ -1.42
MSH2-202ENST00000406134 A0A096LNI7 61 aa6.2□□□□□ -1.42
MSH2-202ENST00000406134 DSCR10P59022 87 aa6.19□□□□□ -1.42
MSH2-202ENST00000406134 CD164Q04900 197 aa6.19□□□□□ -1.42
MSH2-202ENST00000406134 Q8NBF4 154 aa6.19□□□□□ -1.42
MSH2-202ENST00000406134 FAM229BQ4G0N7 80 aa6.19□□□□□ -1.42
MSH2-202ENST00000406134 C1orf137Q5JT78 98 aa6.19□□□□□ -1.42
MSH2-202ENST00000406134 LCE6AA0A183 80 aa6.18□□□□□ -1.42
MSH2-202ENST00000406134 DNAH6Q9C0G6 4158 aa6.18□□□□□ -1.42
MSH2-202ENST00000406134 ETDCA0A1B0GVM5 59 aa6.17□□□□□ -1.42
MSH2-202ENST00000406134 LRCOL1A6NCL2 159 aa6.17□□□□□ -1.42
MSH2-202ENST00000406134 CNBPP62633 177 aaKnown RBP6.17□□□□□ -1.42
MSH2-202ENST00000406134 REG3GQ6UW15 175 aa6.17□□□□□ -1.42
MSH2-202ENST00000406134 C4orf48Q5BLP8 95 aa6.16□□□□□ -1.42
MSH2-202ENST00000406134 TMEM254Q8TBM7 123 aa6.16□□□□□ -1.42
MSH2-202ENST00000406134 A0A1B0GW54 56 aa6.16□□□□□ -1.42
MSH2-202ENST00000406134 LINC00476Q8WZB0 136 aa6.15□□□□□ -1.42
MSH2-202ENST00000406134 C16orf90A8MZG2 172 aa6.15□□□□□ -1.43
MSH2-202ENST00000406134 IGFL1Q6UW32 110 aa6.14□□□□□ -1.43
MSH2-202ENST00000406134 K7EQZ3 153 aa6.14□□□□□ -1.43
MSH2-202ENST00000406134 PRLHP81277 87 aa6.14□□□□□ -1.43
MSH2-202ENST00000406134 IGLV8-61A0A075B6I0 122 aa6.14□□□□□ -1.43
MSH2-202ENST00000406134 APLNQ9ULZ1 77 aa6.14□□□□□ -1.43
MSH2-202ENST00000406134 PRR15Q8IV56 129 aa6.13□□□□□ -1.43
MSH2-202ENST00000406134 DNAH5Q8TE73 4624 aa6.13□□□□□ -1.43
MSH2-202ENST00000406134 PSPHP1O15172 72 aa6.12□□□□□ -1.43
MSH2-202ENST00000406134 NDUFC1O43677 76 aa6.12□□□□□ -1.43
MSH2-202ENST00000406134 CHTF8P0CG12 524 aa6.12□□□□□ -1.43
MSH2-202ENST00000406134 PANO1I0J062 215 aa6.12□□□□□ -1.43
MSH2-202ENST00000406134 FUSP35637 526 aaKnown RBP eCLIP6.12□□□□□ -1.432e-10■□□□□ 9.8
MSH2-202ENST00000406134 ATP5EP56381 51 aaPredicted RBP6.12□□□□□ -1.43
MSH2-202ENST00000406134 UBE2BP63146 152 aa6.12□□□□□ -1.43
MSH2-202ENST00000406134 DNAH11Q96DT5 4516 aa6.12□□□□□ -1.43
MSH2-202ENST00000406134 ZCCHC13Q8WW36 166 aaKnown RBP6.11□□□□□ -1.43
MSH2-202ENST00000406134 HIGD2AQ9BW72 106 aa6.11□□□□□ -1.43
MSH2-202ENST00000406134 IGKV2-24A0A0C4DH68 120 aa6.1□□□□□ -1.43
MSH2-202ENST00000406134 Q6ZRN7 208 aaPredicted RBP6.1□□□□□ -1.43
MSH2-202ENST00000406134 FAM30AQ9NZY2 134 aa6.1□□□□□ -1.43
MSH2-202ENST00000406134 PHF5AQ7RTV0 110 aaKnown RBP6.1□□□□□ -1.43
MSH2-202ENST00000406134 PKD1P98161 4303 aa6.09□□□□□ -1.43
MSH2-202ENST00000406134 KRTAP13-1Q8IUC0 172 aa6.08□□□□□ -1.44
MSH2-202ENST00000406134 DNHD1Q96M86 4753 aa6.08□□□□□ -1.44
MSH2-202ENST00000406134 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.07□□□□□ -1.44
MSH2-202ENST00000406134 RBM12B-AS1Q9P1G2 102 aa6.07□□□□□ -1.44
MSH2-202ENST00000406134 SPRR1BP22528 89 aa6.07□□□□□ -1.44
MSH2-202ENST00000406134 DEFB116Q30KQ4 102 aa6.07□□□□□ -1.44
MSH2-202ENST00000406134 PSCAO43653 123 aa6.06□□□□□ -1.44
MSH2-202ENST00000406134 SPTSSBQ8NFR3 76 aa6.06□□□□□ -1.44
MSH2-202ENST00000406134 MEGF8Q7Z7M0 2845 aa6.05□□□□□ -1.44
MSH2-202ENST00000406134 KRTAP29-1A8MX34 341 aaPredicted RBP6.05□□□□□ -1.44
MSH2-202ENST00000406134 H0Y9J4 135 aa6.05□□□□□ -1.44
MSH2-202ENST00000406134 C9orf163Q8N9P6 203 aa6.05□□□□□ -1.44
MSH2-202ENST00000406134 FAT2Q9NYQ8 4349 aa6.04□□□□□ -1.44
MSH2-202ENST00000406134 RPL37AP61513 92 aaKnown RBP6.04□□□□□ -1.44
MSH2-202ENST00000406134 HYDINQ4G0P3 5121 aa6.04□□□□□ -1.44
MSH2-202ENST00000406134 A0A087WSZ3 146 aa6.03□□□□□ -1.44
MSH2-202ENST00000406134 HCG22E2RYF7 251 aa6.03□□□□□ -1.44
MSH2-202ENST00000406134 LINC00472Q9H8W2 130 aa6.02□□□□□ -1.45
MSH2-202ENST00000406134 A8MU10 97 aa6.01□□□□□ -1.45
MSH2-202ENST00000406134 MDFIQ99750 246 aa6.01□□□□□ -1.45
MSH2-202ENST00000406134 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.01□□□□□ -1.45
MSH2-202ENST00000406134 Q96NJ1 140 aa6□□□□□ -1.45
MSH2-202ENST00000406134 NBDYA0A0U1RRE5 68 aa6□□□□□ -1.45
MSH2-202ENST00000406134 KTN1-AS1Q86SY8 53 aa6□□□□□ -1.45
MSH2-202ENST00000406134 H3BS24 57 aa5.99□□□□□ -1.45
MSH2-202ENST00000406134 UBE2AP49459 152 aa5.99□□□□□ -1.45
MSH2-202ENST00000406134 PRR4Q16378 134 aa5.99□□□□□ -1.45
MSH2-202ENST00000406134 SPACA4Q8TDM5 124 aa5.99□□□□□ -1.45
MSH2-202ENST00000406134 B9D2Q9BPU9 175 aa5.99□□□□□ -1.45
MSH2-202ENST00000406134 UBE2DNLQ8IWF7 75 aa5.99□□□□□ -1.45
MSH2-202ENST00000406134 A8MUN3 132 aa5.98□□□□□ -1.45
MSH2-202ENST00000406134 TRAV22A0A0B4J277 110 aa5.98□□□□□ -1.45
MSH2-202ENST00000406134 hDV103S1A0JD37 113 aa5.98□□□□□ -1.45
MSH2-202ENST00000406134 C14orf177Q52M58 125 aa5.97□□□□□ -1.45
MSH2-202ENST00000406134 WFDC13Q8IUB5 93 aa5.97□□□□□ -1.45
MSH2-202ENST00000406134 LRP1BQ9NZR2 4599 aa5.95□□□□□ -1.46
MSH2-202ENST00000406134 CHKB-CPT1BH3BT56 60 aa5.95□□□□□ -1.46
MSH2-202ENST00000406134 C1orf64Q8NEQ6 169 aa5.95□□□□□ -1.46
MSH2-202ENST00000406134 Q1T7F1 81 aa5.95□□□□□ -1.46
MSH2-202ENST00000406134 ASB16-AS1Q495Z4 193 aa5.95□□□□□ -1.46
MSH2-202ENST00000406134 LINC00483Q53H64 154 aa5.95□□□□□ -1.46
MSH2-202ENST00000406134 MMP24-AS1A0A0U1RRL7 71 aa5.94□□□□□ -1.46
MSH2-202ENST00000406134 A8MWP4 228 aa5.94□□□□□ -1.46
MSH2-202ENST00000406134 VPS13BQ7Z7G8 4022 aa5.93□□□□□ -1.46
MSH2-202ENST00000406134 CYP4F30PQ9H0H9 118 aa5.93□□□□□ -1.46
MSH2-202ENST00000406134 TGP01266 2768 aa5.91□□□□□ -1.46
MSH2-202ENST00000406134 MOBPQ13875 183 aa5.91□□□□□ -1.46
MSH2-202ENST00000406134 A0A087WTM6 91 aa5.91□□□□□ -1.46
MSH2-202ENST00000406134 WWC2-AS2Q96NR7 200 aa5.91□□□□□ -1.46
MSH2-202ENST00000406134 NUPR2A6NF83 97 aa5.9□□□□□ -1.47
MSH2-202ENST00000406134 CASC2Q6XLA1 102 aa5.9□□□□□ -1.47
MSH2-202ENST00000406134 Q6ZR54 194 aa5.89□□□□□ -1.47
MSH2-202ENST00000406134 C8orf87E5RJ46 101 aa5.89□□□□□ -1.47
MSH2-202ENST00000406134 NDUFS5O43920 106 aa5.88□□□□□ -1.47
MSH2-202ENST00000406134 IGLV5-52A0A0A0MRZ9 124 aa5.88□□□□□ -1.47
MSH2-202ENST00000406134 PSORS1C2Q9UIG4 136 aa5.88□□□□□ -1.47
MSH2-202ENST00000406134 PKHD1P08F94 4074 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms