RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 ST20-AS1Q8NBB2 130 aa10.09□□□□□ -0.79
CHRFAM7A-203ENST00000401522 A0A1W2PNM2 257 aa10.08□□□□□ -0.8
CHRFAM7A-203ENST00000401522 OXTP01178 125 aa10.08□□□□□ -0.8
CHRFAM7A-203ENST00000401522 REG3GQ6UW15 175 aa10.07□□□□□ -0.8
CHRFAM7A-203ENST00000401522 Q8NBF4 154 aa10.07□□□□□ -0.8
CHRFAM7A-203ENST00000401522 SNURFQ9Y675 71 aa10.07□□□□□ -0.8
CHRFAM7A-203ENST00000401522 UBE2BP63146 152 aa10.07□□□□□ -0.8
CHRFAM7A-203ENST00000401522 C14orf177Q52M58 125 aa10.07□□□□□ -0.8
CHRFAM7A-203ENST00000401522 FRAS1Q86XX4 4008 aa10.06□□□□□ -0.8
CHRFAM7A-203ENST00000401522 LINC00336Q6ZUF6 198 aa10.06□□□□□ -0.8
CHRFAM7A-203ENST00000401522 SPRR4Q96PI1 79 aa10.05□□□□□ -0.8
CHRFAM7A-203ENST00000401522 SERP1Q9Y6X1 66 aa10.04□□□□□ -0.8
CHRFAM7A-203ENST00000401522 DNAH17Q9UFH2 4485 aa10.03□□□□□ -0.8
CHRFAM7A-203ENST00000401522 F8WEM9 126 aa10.03□□□□□ -0.8
CHRFAM7A-203ENST00000401522 TMEM254Q8TBM7 123 aa10.03□□□□□ -0.8
CHRFAM7A-203ENST00000401522 OCR1Q9BZK8 76 aa10.03□□□□□ -0.8
CHRFAM7A-203ENST00000401522 RYR3Q15413 4870 aa10.02□□□□□ -0.8
CHRFAM7A-203ENST00000401522 CNBPP62633 177 aaKnown RBP10.02□□□□□ -0.81
CHRFAM7A-203ENST00000401522 C16orf90A8MZG2 172 aa10.01□□□□□ -0.81
CHRFAM7A-203ENST00000401522 EPM2AB3EWF7 344 aa10.01□□□□□ -0.81
CHRFAM7A-203ENST00000401522 ATP5EP56381 51 aaPredicted RBP10□□□□□ -0.81
CHRFAM7A-203ENST00000401522 SMIM29Q86T20 159 aa9.99□□□□□ -0.81
CHRFAM7A-203ENST00000401522 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.99□□□□□ -0.81
CHRFAM7A-203ENST00000401522 A0A096LNI7 61 aa9.99□□□□□ -0.81
CHRFAM7A-203ENST00000401522 FAT2Q9NYQ8 4349 aa9.99□□□□□ -0.81
CHRFAM7A-203ENST00000401522 A0A0U1RQV1 116 aa9.96□□□□□ -0.81
CHRFAM7A-203ENST00000401522 IGKV2-24A0A0C4DH68 120 aa9.95□□□□□ -0.82
CHRFAM7A-203ENST00000401522 A0A1W2PNN7 141 aa9.95□□□□□ -0.82
CHRFAM7A-203ENST00000401522 A0A1B0GVY2 172 aa9.94□□□□□ -0.82
CHRFAM7A-203ENST00000401522 KRTAP10-2P60368 255 aa9.94□□□□□ -0.82
CHRFAM7A-203ENST00000401522 Q5XG85 94 aa9.94□□□□□ -0.82
CHRFAM7A-203ENST00000401522 C9orf163Q8N9P6 203 aa9.94□□□□□ -0.82
CHRFAM7A-203ENST00000401522 IGLV8-61A0A075B6I0 122 aa9.94□□□□□ -0.82
CHRFAM7A-203ENST00000401522 DSCR10P59022 87 aa9.94□□□□□ -0.82
CHRFAM7A-203ENST00000401522 C5orf47Q569G3 176 aa9.94□□□□□ -0.82
CHRFAM7A-203ENST00000401522 IGLV5-52A0A0A0MRZ9 124 aa9.92□□□□□ -0.82
CHRFAM7A-203ENST00000401522 PRLHP81277 87 aa9.92□□□□□ -0.82
CHRFAM7A-203ENST00000401522 PKD1P98161 4303 aa9.92□□□□□ -0.82
CHRFAM7A-203ENST00000401522 IGFL1Q6UW32 110 aa9.92□□□□□ -0.82
CHRFAM7A-203ENST00000401522 HECTD4Q9Y4D8 3996 aa9.9□□□□□ -0.82
CHRFAM7A-203ENST00000401522 PKIGQ9Y2B9 76 aa9.9□□□□□ -0.83
CHRFAM7A-203ENST00000401522 HIGD2AQ9BW72 106 aa9.89□□□□□ -0.83
CHRFAM7A-203ENST00000401522 FAM30AQ9NZY2 134 aa9.89□□□□□ -0.83
CHRFAM7A-203ENST00000401522 DNAH11Q96DT5 4516 aa9.89□□□□□ -0.83
CHRFAM7A-203ENST00000401522 K7EQZ3 153 aa9.88□□□□□ -0.83
CHRFAM7A-203ENST00000401522 C4orf26Q17RF5 130 aa9.88□□□□□ -0.83
CHRFAM7A-203ENST00000401522 H0Y9J4 135 aa9.88□□□□□ -0.83
CHRFAM7A-203ENST00000401522 SMIM26A0A096LP01 95 aa9.87□□□□□ -0.83
CHRFAM7A-203ENST00000401522 UBE2AP49459 152 aa9.86□□□□□ -0.83
CHRFAM7A-203ENST00000401522 SPRR1BP22528 89 aa9.85□□□□□ -0.83
CHRFAM7A-203ENST00000401522 HCG22E2RYF7 251 aa9.84□□□□□ -0.83
CHRFAM7A-203ENST00000401522 PHF5AQ7RTV0 110 aaKnown RBP9.84□□□□□ -0.83
CHRFAM7A-203ENST00000401522 A0A0G2JQZ4 141 aa9.84□□□□□ -0.83
CHRFAM7A-203ENST00000401522 CHTF8P0CG12 524 aa9.83□□□□□ -0.84
CHRFAM7A-203ENST00000401522 HRCT1Q6UXD1 115 aa9.83□□□□□ -0.84
CHRFAM7A-203ENST00000401522 A0A087WSZ3 146 aa9.82□□□□□ -0.84
CHRFAM7A-203ENST00000401522 LINC00474Q9P2X8 69 aa9.82□□□□□ -0.84
CHRFAM7A-203ENST00000401522 KRTAP11-1Q8IUC1 163 aa9.81□□□□□ -0.84
CHRFAM7A-203ENST00000401522 KRTAP10-1P60331 282 aa9.8□□□□□ -0.84
CHRFAM7A-203ENST00000401522 DNAH5Q8TE73 4624 aa9.79□□□□□ -0.84
CHRFAM7A-203ENST00000401522 PKHD1P08F94 4074 aa9.79□□□□□ -0.84
CHRFAM7A-203ENST00000401522 ZCCHC13Q8WW36 166 aaKnown RBP9.78□□□□□ -0.84
CHRFAM7A-203ENST00000401522 FP248Q71RG6 208 aaPredicted RBP9.78□□□□□ -0.84
CHRFAM7A-203ENST00000401522 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.78□□□□□ -0.84
CHRFAM7A-203ENST00000401522 PANO1I0J062 215 aa9.77□□□□□ -0.85
CHRFAM7A-203ENST00000401522 Q6ZSA8 131 aa9.77□□□□□ -0.85
CHRFAM7A-203ENST00000401522 SPACA4Q8TDM5 124 aa9.76□□□□□ -0.85
CHRFAM7A-203ENST00000401522 DEFB116Q30KQ4 102 aa9.76□□□□□ -0.85
CHRFAM7A-203ENST00000401522 WFDC13Q8IUB5 93 aa9.72□□□□□ -0.85
CHRFAM7A-203ENST00000401522 KRTAP13-1Q8IUC0 172 aa9.72□□□□□ -0.85
CHRFAM7A-203ENST00000401522 KRTAP29-1A8MX34 341 aaPredicted RBP9.7□□□□□ -0.86
CHRFAM7A-203ENST00000401522 PRR15Q8IV56 129 aa9.7□□□□□ -0.86
CHRFAM7A-203ENST00000401522 LINC00472Q9H8W2 130 aa9.7□□□□□ -0.86
CHRFAM7A-203ENST00000401522 RPL37AP61513 92 aaKnown RBP9.7□□□□□ -0.86
CHRFAM7A-203ENST00000401522 PLAC8Q9NZF1 115 aa9.7□□□□□ -0.86
CHRFAM7A-203ENST00000401522 A8MWP4 228 aa9.69□□□□□ -0.86
CHRFAM7A-203ENST00000401522 MP68P56378 58 aa9.68□□□□□ -0.86
CHRFAM7A-203ENST00000401522 NDUFB1O75438 58 aa9.68□□□□□ -0.86
CHRFAM7A-203ENST00000401522 FAM229BQ4G0N7 80 aa9.68□□□□□ -0.86
CHRFAM7A-203ENST00000401522 CIRBP-AS1Q8TBR5 109 aa9.68□□□□□ -0.86
CHRFAM7A-203ENST00000401522 LRP1BQ9NZR2 4599 aa9.67□□□□□ -0.86
CHRFAM7A-203ENST00000401522 EPPK1P58107 5090 aaKnown RBP9.67□□□□□ -0.86
CHRFAM7A-203ENST00000401522 CASC2Q6XLA1 102 aa9.67□□□□□ -0.86
CHRFAM7A-203ENST00000401522 DYNC1H1Q14204 4646 aaKnown RBP9.66□□□□□ -0.86
CHRFAM7A-203ENST00000401522 DNAH8Q96JB1 4490 aa9.66□□□□□ -0.86
CHRFAM7A-203ENST00000401522 hDV103S1A0JD37 113 aa9.66□□□□□ -0.86
CHRFAM7A-203ENST00000401522 CYP4F30PQ9H0H9 118 aa9.64□□□□□ -0.87
CHRFAM7A-203ENST00000401522 H3BPC8 53 aa9.63□□□□□ -0.87
CHRFAM7A-203ENST00000401522 CDK2AP2O75956 126 aa9.62□□□□□ -0.87
CHRFAM7A-203ENST00000401522 TRAV22A0A0B4J277 110 aa9.61□□□□□ -0.87
CHRFAM7A-203ENST00000401522 C1orf64Q8NEQ6 169 aa9.61□□□□□ -0.87
CHRFAM7A-203ENST00000401522 LINC00483Q53H64 154 aa9.6□□□□□ -0.87
CHRFAM7A-203ENST00000401522 H0Y9P7 68 aa9.59□□□□□ -0.87
CHRFAM7A-203ENST00000401522 MPLKIPQ8TAP9 179 aa9.59□□□□□ -0.87
CHRFAM7A-203ENST00000401522 LINC00208Q96KT6 92 aa9.59□□□□□ -0.87
CHRFAM7A-203ENST00000401522 ZNF706Q9Y5V0 76 aaPredicted RBP9.59□□□□□ -0.87
CHRFAM7A-203ENST00000401522 PRO0628Q9UI54 55 aa9.57□□□□□ -0.88
CHRFAM7A-203ENST00000401522 IGLV9-49A0A0B4J1Y8 123 aa9.56□□□□□ -0.88
CHRFAM7A-203ENST00000401522 MMP24-AS1A0A0U1RRL7 71 aa9.56□□□□□ -0.88
CHRFAM7A-203ENST00000401522 APOBP04114 4563 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms