RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 TRAV13-2A0A0B4J235 113 aa7.33□□□□□ -1.24
SKA3-203ENST00000400018 APOBP04114 4563 aaKnown RBP7.32□□□□□ -1.24
SKA3-203ENST00000400018 IGLV6-57P01721 117 aa7.32□□□□□ -1.24
SKA3-203ENST00000400018 SMR3BP02814 79 aaPredicted RBP7.32□□□□□ -1.24
SKA3-203ENST00000400018 SPACA4Q8TDM5 124 aa7.32□□□□□ -1.24
SKA3-203ENST00000400018 UBE2BP63146 152 aa7.32□□□□□ -1.24
SKA3-203ENST00000400018 PRLHP81277 87 aa7.32□□□□□ -1.24
SKA3-203ENST00000400018 CIRBP-AS1Q8TBR5 109 aa7.32□□□□□ -1.24
SKA3-203ENST00000400018 KIAA1109Q2LD37 5005 aa7.32□□□□□ -1.24
SKA3-203ENST00000400018 M0R378 163 aa7.31□□□□□ -1.24
SKA3-203ENST00000400018 OBSCN-AS1Q96MR7 158 aa7.31□□□□□ -1.24
SKA3-203ENST00000400018 SCXQ7RTU7 201 aa7.3□□□□□ -1.24
SKA3-203ENST00000400018 FAM229BQ4G0N7 80 aa7.3□□□□□ -1.24
SKA3-203ENST00000400018 COPS9Q8WXC6 57 aa7.3□□□□□ -1.24
SKA3-203ENST00000400018 IGLV1-50A0A075B6I6 118 aa7.29□□□□□ -1.24
SKA3-203ENST00000400018 ZNF73O43830 326 aaPredicted RBP7.29□□□□□ -1.24
SKA3-203ENST00000400018 A0A1B0GVY2 172 aa7.29□□□□□ -1.24
SKA3-203ENST00000400018 KLKP1Q107X0 134 aa7.29□□□□□ -1.24
SKA3-203ENST00000400018 TRAV7A0A075B6U4 112 aa7.28□□□□□ -1.24
SKA3-203ENST00000400018 ERC2-IT1O76042 136 aa7.27□□□□□ -1.25
SKA3-203ENST00000400018 PMAIP1Q13794 54 aa7.26□□□□□ -1.25
SKA3-203ENST00000400018 DEFB105AQ8NG35 78 aa7.26□□□□□ -1.25
SKA3-203ENST00000400018 ST20-AS1Q8NBB2 130 aa7.26□□□□□ -1.25
SKA3-203ENST00000400018 Q9BRP9 147 aa7.25□□□□□ -1.25
SKA3-203ENST00000400018 ATP5EP2Q5VTU8 51 aa7.24□□□□□ -1.25
SKA3-203ENST00000400018 DIRC1Q969H9 104 aa7.24□□□□□ -1.25
SKA3-203ENST00000400018 HIGD2AQ9BW72 106 aa7.24□□□□□ -1.25
SKA3-203ENST00000400018 ANAPC11Q9NYG5 84 aa7.23□□□□□ -1.25
SKA3-203ENST00000400018 PSORS1C2Q9UIG4 136 aa7.23□□□□□ -1.25
SKA3-203ENST00000400018 REG3GQ6UW15 175 aa7.23□□□□□ -1.25
SKA3-203ENST00000400018 ORMDL1Q9P0S3 153 aa7.23□□□□□ -1.25
SKA3-203ENST00000400018 KCNQ1DNQ9H478 68 aa7.22□□□□□ -1.25
SKA3-203ENST00000400018 A0A0G2JQZ4 141 aa7.22□□□□□ -1.25
SKA3-203ENST00000400018 KRTAP17-1Q9BYP8 105 aa7.22□□□□□ -1.25
SKA3-203ENST00000400018 UBL5Q9BZL1 73 aa7.22□□□□□ -1.25
SKA3-203ENST00000400018 PLA2G2DQ9UNK4 145 aa7.22□□□□□ -1.25
SKA3-203ENST00000400018 HSPG2P98160 4391 aa7.22□□□□□ -1.25
SKA3-203ENST00000400018 H0YGX0 51 aa7.21□□□□□ -1.25
SKA3-203ENST00000400018 COX7BP24311 80 aa7.21□□□□□ -1.25
SKA3-203ENST00000400018 C1orf137Q5JT78 98 aa7.21□□□□□ -1.25
SKA3-203ENST00000400018 Q6ZQY7 126 aa7.21□□□□□ -1.25
SKA3-203ENST00000400018 IGLV5-37A0A075B6J1 123 aa7.21□□□□□ -1.26
SKA3-203ENST00000400018 ETDCA0A1B0GVM5 59 aa7.21□□□□□ -1.26
SKA3-203ENST00000400018 KRTAP4-16G5E9R7 235 aaPredicted RBP7.21□□□□□ -1.26
SKA3-203ENST00000400018 LINC00575Q6W349 94 aa7.2□□□□□ -1.26
SKA3-203ENST00000400018 PLAC8Q9NZF1 115 aa7.2□□□□□ -1.26
SKA3-203ENST00000400018 ELOF1P60002 83 aaKnown RBP7.2□□□□□ -1.26
SKA3-203ENST00000400018 LINC00528Q8N1L1 170 aa7.19□□□□□ -1.26
SKA3-203ENST00000400018 Q6ZSA8 131 aa7.18□□□□□ -1.26
SKA3-203ENST00000400018 FLG2Q5D862 2391 aaPredicted RBP7.17□□□□□ -1.26
SKA3-203ENST00000400018 UBE2AP49459 152 aa7.17□□□□□ -1.26
SKA3-203ENST00000400018 Q6ZRX8 168 aa7.17□□□□□ -1.26
SKA3-203ENST00000400018 JMJD7-PLA2G4BH0Y9G9 81 aa7.16□□□□□ -1.26
SKA3-203ENST00000400018 NDUFC1O43677 76 aa7.16□□□□□ -1.26
SKA3-203ENST00000400018 BCE1O60756 84 aa7.16□□□□□ -1.26
SKA3-203ENST00000400018 SPRR1AP35321 89 aa7.16□□□□□ -1.26
SKA3-203ENST00000400018 LINC01547P58512 204 aaPredicted RBP7.16□□□□□ -1.26
SKA3-203ENST00000400018 PRR15Q8IV56 129 aa7.16□□□□□ -1.26
SKA3-203ENST00000400018 RYR1P21817 5038 aa7.16□□□□□ -1.26
SKA3-203ENST00000400018 ATP5EP56381 51 aaPredicted RBP7.15□□□□□ -1.26
SKA3-203ENST00000400018 TRBV7-4A0A0J9YYF1 115 aa7.15□□□□□ -1.26
SKA3-203ENST00000400018 PRYO14603 147 aa7.15□□□□□ -1.26
SKA3-203ENST00000400018 LRP1Q07954 4544 aaKnown RBP7.15□□□□□ -1.27
SKA3-203ENST00000400018 MYCBP2O75592 4640 aa7.13□□□□□ -1.27
SKA3-203ENST00000400018 CD164Q04900 197 aa7.13□□□□□ -1.27
SKA3-203ENST00000400018 TMEM254Q8TBM7 123 aa7.13□□□□□ -1.27
SKA3-203ENST00000400018 Q6ZVQ6 151 aa7.12□□□□□ -1.27
SKA3-203ENST00000400018 TMEM256-PLSCR3K7ERE1 68 aa7.11□□□□□ -1.27
SKA3-203ENST00000400018 Q8N377 158 aa7.11□□□□□ -1.27
SKA3-203ENST00000400018 NREPQ16612 68 aa7.1□□□□□ -1.27
SKA3-203ENST00000400018 Q6ZQT0 140 aa7.09□□□□□ -1.27
SKA3-203ENST00000400018 LAMTOR3Q9UHA4 124 aa7.08□□□□□ -1.28
SKA3-203ENST00000400018 PSPHP1O15172 72 aa7.08□□□□□ -1.28
SKA3-203ENST00000400018 KRTAP13-1Q8IUC0 172 aa7.08□□□□□ -1.28
SKA3-203ENST00000400018 IGLV7-43P04211 117 aa7.07□□□□□ -1.28
SKA3-203ENST00000400018 A8MU10 97 aa7.07□□□□□ -1.28
SKA3-203ENST00000400018 IGLV9-49A0A0B4J1Y8 123 aa7.06□□□□□ -1.28
SKA3-203ENST00000400018 BPY2O14599 106 aa7.06□□□□□ -1.28
SKA3-203ENST00000400018 ZNF861PO60384 105 aa7.04□□□□□ -1.28
SKA3-203ENST00000400018 CXCL6P80162 114 aa7.04□□□□□ -1.28
SKA3-203ENST00000400018 Q8N9L7 120 aa7.03□□□□□ -1.28
SKA3-203ENST00000400018 DHRS4-AS1Q9P1J3 65 aa7.03□□□□□ -1.28
SKA3-203ENST00000400018 RPL37AP61513 92 aaKnown RBP7.03□□□□□ -1.28
SKA3-203ENST00000400018 SMIM29Q86T20 159 aa7.03□□□□□ -1.28
SKA3-203ENST00000400018 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.02□□□□□ -1.29
SKA3-203ENST00000400018 KRTAP4-5Q9BYR2 181 aa7.02□□□□□ -1.29
SKA3-203ENST00000400018 hDV103S1A0JD37 113 aa7.01□□□□□ -1.29
SKA3-203ENST00000400018 PKHD1L1Q86WI1 4243 aa7.01□□□□□ -1.29
SKA3-203ENST00000400018 LOC110117498A0A087WWA1 95 aa7.01□□□□□ -1.29
SKA3-203ENST00000400018 A0A087X002 238 aa7.01□□□□□ -1.29
SKA3-203ENST00000400018 RBM12B-AS1Q9P1G2 102 aa7.01□□□□□ -1.29
SKA3-203ENST00000400018 Q1T7F1 81 aa7□□□□□ -1.29
SKA3-203ENST00000400018 KRTAP10-4P60372 401 aaPredicted RBP6.99□□□□□ -1.29
SKA3-203ENST00000400018 ABCA13Q86UQ4 5058 aa6.99□□□□□ -1.29
SKA3-203ENST00000400018 SPRR4Q96PI1 79 aa6.99□□□□□ -1.29
SKA3-203ENST00000400018 TRAV22A0A0B4J277 110 aa6.99□□□□□ -1.29
SKA3-203ENST00000400018 C1orf64Q8NEQ6 169 aa6.99□□□□□ -1.29
SKA3-203ENST00000400018 OCR1Q9BZK8 76 aa6.98□□□□□ -1.29
SKA3-203ENST00000400018 Q5VSD8 79 aa6.98□□□□□ -1.29
SKA3-203ENST00000400018 C4orf48Q5BLP8 95 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms