RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 FAM229BQ4G0N7 80 aa6.95□□□□□ -1.3
TFF3-202ENST00000398431 OR13C6PQ8NH95 151 aa6.95□□□□□ -1.3
TFF3-202ENST00000398431 TPRXLQ17RH7 258 aa6.94□□□□□ -1.3
TFF3-202ENST00000398431 Q6Q795 121 aa6.94□□□□□ -1.3
TFF3-202ENST00000398431 LINC00304Q8N9R0 145 aa6.94□□□□□ -1.3
TFF3-202ENST00000398431 NDUFC2O95298 119 aa6.93□□□□□ -1.3
TFF3-202ENST00000398431 UBE2AP49459 152 aa6.93□□□□□ -1.3
TFF3-202ENST00000398431 IGLV7-46A0A075B6I9 117 aa6.92□□□□□ -1.3
TFF3-202ENST00000398431 A0A1B0GX51 115 aa6.92□□□□□ -1.3
TFF3-202ENST00000398431 SMIM11BQ8TCY0 68 aa6.92□□□□□ -1.3
TFF3-202ENST00000398431 LINC00337Q8N6G1 96 aa6.91□□□□□ -1.3
TFF3-202ENST00000398431 IGKV2-28A0A075B6P5 120 aa6.9□□□□□ -1.3
TFF3-202ENST00000398431 IGKV2D-28P01615 120 aa6.9□□□□□ -1.3
TFF3-202ENST00000398431 PRLHP81277 87 aa6.9□□□□□ -1.3
TFF3-202ENST00000398431 NKAPP1Q8N9T2 125 aa6.9□□□□□ -1.3
TFF3-202ENST00000398431 ANAPC13Q9BS18 74 aa6.9□□□□□ -1.3
TFF3-202ENST00000398431 TMEM126AQ9H061 195 aa6.9□□□□□ -1.3
TFF3-202ENST00000398431 VPREB1P12018 145 aa6.89□□□□□ -1.31
TFF3-202ENST00000398431 Q8NDZ9 215 aa6.89□□□□□ -1.31
TFF3-202ENST00000398431 IMUPQ9GZP8 106 aa6.89□□□□□ -1.31
TFF3-202ENST00000398431 FAM19A1Q7Z5A9 133 aa6.88□□□□□ -1.31
TFF3-202ENST00000398431 C3orf22Q8N5N4 141 aa6.88□□□□□ -1.31
TFF3-202ENST00000398431 H3BQ85 93 aa6.87□□□□□ -1.31
TFF3-202ENST00000398431 M0R378 163 aa6.87□□□□□ -1.31
TFF3-202ENST00000398431 LINC00643Q86TS7 51 aa6.87□□□□□ -1.31
TFF3-202ENST00000398431 ORMDL1Q9P0S3 153 aa6.87□□□□□ -1.31
TFF3-202ENST00000398431 S100A7L2Q5SY68 101 aa6.86□□□□□ -1.31
TFF3-202ENST00000398431 FAM218AQ96MZ4 157 aa6.86□□□□□ -1.31
TFF3-202ENST00000398431 GHRHP01286 108 aa6.85□□□□□ -1.31
TFF3-202ENST00000398431 TRBV7-7A0A0K0K1E9 115 aa6.84□□□□□ -1.31
TFF3-202ENST00000398431 JMJD7-PLA2G4BH0Y9G9 81 aa6.84□□□□□ -1.31
TFF3-202ENST00000398431 NDUFV3P56181 108 aaKnown RBP6.84□□□□□ -1.31
TFF3-202ENST00000398431 TMEM256-PLSCR3K7ERE1 68 aa6.83□□□□□ -1.32
TFF3-202ENST00000398431 GAGE2AQ6NT46 116 aa6.83□□□□□ -1.32
TFF3-202ENST00000398431 KRTAP4-1Q9BYQ7 146 aa6.83□□□□□ -1.32
TFF3-202ENST00000398431 SPAG11AQ6PDA7 123 aa6.82□□□□□ -1.32
TFF3-202ENST00000398431 KRTAP13-3Q3SY46 172 aa6.81□□□□□ -1.32
TFF3-202ENST00000398431 OBSCN-AS1Q96MR7 158 aa6.81□□□□□ -1.32
TFF3-202ENST00000398431 SPRR4Q96PI1 79 aa6.81□□□□□ -1.32
TFF3-202ENST00000398431 HIGD2AQ9BW72 106 aa6.81□□□□□ -1.32
TFF3-202ENST00000398431 FP248Q71RG6 208 aaPredicted RBP6.8□□□□□ -1.32
TFF3-202ENST00000398431 ASB16-AS1Q495Z4 193 aa6.79□□□□□ -1.32
TFF3-202ENST00000398431 NCR3O14931 201 aa6.78□□□□□ -1.32
TFF3-202ENST00000398431 hADV29S1A0JD25 119 aa6.77□□□□□ -1.33
TFF3-202ENST00000398431 C6orf99Q4VX62 202 aa6.77□□□□□ -1.33
TFF3-202ENST00000398431 LCE2DQ5TA82 110 aaPredicted RBP6.77□□□□□ -1.33
TFF3-202ENST00000398431 C14orf132Q9NPU4 83 aa6.77□□□□□ -1.33
TFF3-202ENST00000398431 CCKP06307 115 aa6.76□□□□□ -1.33
TFF3-202ENST00000398431 LINC00575Q6W349 94 aa6.76□□□□□ -1.33
TFF3-202ENST00000398431 Q8NBF4 154 aa6.76□□□□□ -1.33
TFF3-202ENST00000398431 TRBV7-6A0A0J9YX20 115 aa6.75□□□□□ -1.33
TFF3-202ENST00000398431 TRBV10-3A0A0K0K1G6 114 aa6.75□□□□□ -1.33
TFF3-202ENST00000398431 IGLV6-57P01721 117 aa6.75□□□□□ -1.33
TFF3-202ENST00000398431 PDE6GP18545 87 aa6.75□□□□□ -1.33
TFF3-202ENST00000398431 SPRR1AP35321 89 aa6.75□□□□□ -1.33
TFF3-202ENST00000398431 C4orf48Q5BLP8 95 aa6.75□□□□□ -1.33
TFF3-202ENST00000398431 Q6JHZ5 121 aa6.75□□□□□ -1.33
TFF3-202ENST00000398431 SMCR5Q8TEV8 140 aa6.75□□□□□ -1.33
TFF3-202ENST00000398431 KRTAP4-16G5E9R7 235 aaPredicted RBP6.74□□□□□ -1.33
TFF3-202ENST00000398431 ATP5EP2Q5VTU8 51 aa6.74□□□□□ -1.33
TFF3-202ENST00000398431 TRAV23DV6A0A075B6W5 121 aa6.73□□□□□ -1.33
TFF3-202ENST00000398431 LINC01547P58512 204 aaPredicted RBP6.73□□□□□ -1.33
TFF3-202ENST00000398431 FAM236AA0A1B0GUQ0 79 aa6.72□□□□□ -1.33
TFF3-202ENST00000398431 FAM236BA0A1B0GV22 79 aa6.72□□□□□ -1.33
TFF3-202ENST00000398431 SPINK1P00995 79 aa6.72□□□□□ -1.33
TFF3-202ENST00000398431 RBM3P98179 157 aaKnown RBP6.72□□□□□ -1.33
TFF3-202ENST00000398431 KCNQ1DNQ9H478 68 aa6.72□□□□□ -1.33
TFF3-202ENST00000398431 LAMTOR3Q9UHA4 124 aa6.72□□□□□ -1.33
TFF3-202ENST00000398431 ZNF706Q9Y5V0 76 aaPredicted RBP6.72□□□□□ -1.33
TFF3-202ENST00000398431 ATOX1O00244 68 aa6.71□□□□□ -1.34
TFF3-202ENST00000398431 PRYO14603 147 aa6.71□□□□□ -1.34
TFF3-202ENST00000398431 COX7BP24311 80 aa6.71□□□□□ -1.34
TFF3-202ENST00000398431 LINC00483Q53H64 154 aa6.71□□□□□ -1.34
TFF3-202ENST00000398431 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.71□□□□□ -1.34
TFF3-202ENST00000398431 UBL5Q9BZL1 73 aa6.71□□□□□ -1.34
TFF3-202ENST00000398431 SEC61BP60468 96 aaKnown RBP6.7□□□□□ -1.34
TFF3-202ENST00000398431 LCE2CQ5TA81 110 aa6.7□□□□□ -1.34
TFF3-202ENST00000398431 DSCR8Q96T75 97 aa6.7□□□□□ -1.34
TFF3-202ENST00000398431 ZNF73O43830 326 aaPredicted RBP6.69□□□□□ -1.34
TFF3-202ENST00000398431 ERC2-IT1O76042 136 aa6.69□□□□□ -1.34
TFF3-202ENST00000398431 Q8N377 158 aa6.69□□□□□ -1.34
TFF3-202ENST00000398431 LINC00846Q9NV44 126 aa6.69□□□□□ -1.34
TFF3-202ENST00000398431 LOC110117498A0A087WWA1 95 aa6.68□□□□□ -1.34
TFF3-202ENST00000398431 B5MCH6 92 aa6.68□□□□□ -1.34
TFF3-202ENST00000398431 CRCT1Q9UGL9 99 aa6.68□□□□□ -1.34
TFF3-202ENST00000398431 UQCRQO14949 82 aa6.67□□□□□ -1.34
TFF3-202ENST00000398431 RPS29P62273 56 aaKnown RBP6.67□□□□□ -1.34
TFF3-202ENST00000398431 XP32Q5T750 250 aa6.67□□□□□ -1.34
TFF3-202ENST00000398431 SSBP3-AS1Q7Z2R9 100 aa6.67□□□□□ -1.34
TFF3-202ENST00000398431 ETDCA0A1B0GVM5 59 aa6.66□□□□□ -1.34
TFF3-202ENST00000398431 CCDC179H3BU77 68 aa6.66□□□□□ -1.34
TFF3-202ENST00000398431 ELOF1P60002 83 aaKnown RBP6.66□□□□□ -1.34
TFF3-202ENST00000398431 MOBPQ13875 183 aa6.66□□□□□ -1.34
TFF3-202ENST00000398431 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
TFF3-202ENST00000398431 Q6ZQY7 126 aa6.66□□□□□ -1.34
TFF3-202ENST00000398431 IGLV9-49A0A0B4J1Y8 123 aa6.65□□□□□ -1.34
TFF3-202ENST00000398431 IGKV3D-7A0A0C4DH55 119 aa6.65□□□□□ -1.34
TFF3-202ENST00000398431 Q9BRP9 147 aa6.65□□□□□ -1.34
TFF3-202ENST00000398431 FSIP2Q5CZC0 6907 aa6.64□□□□□ -1.35
TFF3-202ENST00000398431 Q6ZQT0 140 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms